FFCP PHASE1:Hg19::chr11:62472928..62472939,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=45bp_to_CU678804,CU680238,CU692014_5end | |||
|description=CAGE_peak_1_at_CU678804_5end,CAGE_peak_1_at_CU680238_5end,CAGE_peak_1_at_CU692014_5end | |||
|id=chr11:62472928..62472939,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.07e-10;1!CL:0002616;5.07e-10;1!CL:0000511;1.36e-09;1!CL:0002625;1.36e-09;1!CL:0000216;1.36e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,4.09e-10,1;CL:0002616,4.87e-10,1;CL:0000511,8.91e-10,1;CL:0002625,8.91e-10,1;CL:0000216,8.91e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.36e-09;1!UBERON:0005795;4.26e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.08e-25;3!DOID:127;1.08e-25;3!DOID:0060072;1.95e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.91e-26,3;DOID:127,2.91e-26,3;DOID:0060072,7.34e-20,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.02e-11!57;UBERON:0005068!2.02e-11!57;UBERON:0006241!2.02e-11!57;UBERON:0007135!2.02e-11!57;UBERON:0001017!7.05e-11!82;UBERON:0005743!1.90e-10!86;UBERON:0002020!9.88e-10!34;UBERON:0003528!9.88e-10!34;UBERON:0002616!1.16e-09!59;UBERON:0002346!1.34e-09!90;UBERON:0001869!1.40e-09!32;UBERON:0007023!3.85e-09!115;UBERON:0003075!9.08e-09!86;UBERON:0007284!9.08e-09!86;UBERON:0000073!1.12e-08!94;UBERON:0001016!1.12e-08!94;UBERON:0001893!1.29e-08!34;UBERON:0002780!1.66e-08!41;UBERON:0001890!1.66e-08!41;UBERON:0006240!1.66e-08!41;UBERON:0002791!3.90e-08!33;UBERON:0003080!4.01e-08!42;UBERON:0000956!1.10e-07!25;UBERON:0000203!1.10e-07!25;UBERON:0000955!3.35e-07!69;UBERON:0006238!3.35e-07!69;UBERON:0002619!3.94e-07!22;UBERON:0001950!7.00e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.65e-18;2!UBERON:0000473;7.58e-10;8!UBERON:0001736;1.36e-09;1!UBERON:0001136;1.36e-09;1!UBERON:0001343;1.36e-09;1!UBERON:0004910;1.36e-09;1!UBERON:0004813;1.36e-09;1!UBERON:0003135;2.72e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.06e-18,2;UBERON:0000473,8.07e-10,8;UBERON:0001136,8.91e-10,1;UBERON:0001343,8.91e-10,1;UBERON:0004910,8.91e-10,1;UBERON:0005154,8.91e-10,1;UBERON:0005295,8.91e-10,1;UBERON:0004813,8.91e-10,1;UBERON:0005297,8.91e-10,1;UBERON:0005294,8.91e-10,1;UBERON:0010141,8.91e-10,1;UBERON:0005891,8.91e-10,1;UBERON:0001736,1.25e-09,1;UBERON:0006298,1.25e-09,1;UBERON:0003133,8.31e-08,48;UBERON:0003135,2.84e-07,11 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0.408001382488506,0.313454721478088,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.665188192387692,0,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.352303495931295,0,0,0,0,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.250237039743928,0,0,0,0,0,0,0.213557388818567,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.484938170456436,0,0,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0,0,0.236613600079688,0.337169380156203,0.482022059766964,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0.492434012174795,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0.857479297891735,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.167516265334349,2.55175500661265,0,0,0,0.12269149171914,0.500170521059677,0,0,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0.248107807818777,0,0,0,0,0,2.96836132889982,0.462629081407967,0,0,2.07701771673448,0.348631135379878,0,0.200506470303285,0.184161977871793,0.229628896329213,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,1.6068392984416,0,0.616194468458578,0.15350367472613,0,0.107420244868274,0,0.340906509664404,0,0.165284915360978,0.192190067365106,0,0,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0.54907405947211,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0.354761064070598,0,0.987884678879706,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0.442317039724898,0.886642856860642,0.438770794307945,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0.937057782901357,0,0,0,0.789168805698781,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0.290268993867255,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0,0,0.253243183823515,0.195551382734803,0,0,0.599428828746391,0,0,0.343189995723929,0,0.124252535565433,0.235694034616795,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,1.59045937961861,0,0.321506296930038,0.550157746388935,2.07720169014593,0,0,0.242998226632099,0,0.157611414598396,0.0524545881349981,0,0.537862017998534,0,0,0,0,2.71499800876856,1.72844298240254,1.63293680054705,0,0,0.170388021785422,0,0,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0.414239055347196,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,3.66078794705889,0.500763722825999,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0.53168342911599,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0.495743057036009,0,0,0.157723490002507,0.80057074828547,0.705351887381368,0,0.385375350578757,0,0.159633859057151,1.23069818544453,0.756215088665154,0.138314504928436,0.807378228159255,0,0,0,0.917142992608395,0.231051332300676,0,0,0,0,0,1.56302802246618,0,0,0,0.270150338473579,0,0.413373593002368,0.126831620387814,1.09394961803644,0.548257766857182,0,0.17587124435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| |||
|short_description=p1@CU678804,p1@CU680238,p1@CU692014 | |||
}} |
Revision as of 08:11, 11 January 2014
Short description: | p1@CU678804, p1@CU680238, p1@CU692014 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CU678804_5end, CAGE_peak_1_at_CU680238_5end, CAGE_peak_1_at_CU692014_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_CU678804, CU680238, CU692014_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 4.09e-10 | 1 |
perirenal adipocyte cell | 4.87e-10 | 1 |
androgen binding protein secreting cell | 8.91e-10 | 1 |
seminiferous tubule epithelial cell | 8.91e-10 | 1 |
Sertoli cell | 8.91e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.06e-18 | 2 |
testis | 8.07e-10 | 8 |
mesothelium | 8.91e-10 | 1 |
seminiferous tubule of testis | 8.91e-10 | 1 |
epithelium of male gonad | 8.91e-10 | 1 |
epithelial cord | 8.91e-10 | 1 |
sex cord | 8.91e-10 | 1 |
seminiferous tubule epithelium | 8.91e-10 | 1 |
testis sex cord | 8.91e-10 | 1 |
genital ridge | 8.91e-10 | 1 |
primitive sex cord of indifferent gonad | 8.91e-10 | 1 |
coelomic epithelium | 8.91e-10 | 1 |
submandibular gland | 1.25e-09 | 1 |
submandibular gland primordium | 1.25e-09 | 1 |
reproductive organ | 8.31e-08 | 48 |
male reproductive organ | 2.84e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.91e-26 | 3 |
leiomyoma | 2.91e-26 | 3 |
benign neoplasm | 7.34e-20 | 4 |