FFCP PHASE1:Hg19::chr11:65626797..65626819,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1072 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1874 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1A4 | |||
|association_with_transcript=-37bp_to_ENST00000531413_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_14_at_CFL1_5end | |||
|id=chr11:65626797..65626819,- | |||
|ontology_enrichment_celltype=CL:0000055!6.82e-12!180;CL:0000144!8.98e-08!625;CL:0002371!9.02e-08!591;CL:0000548!3.68e-07!679;CL:0000004!3.68e-07!679;CL:0000255!3.68e-07!679;CL:0000012!8.56e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.79e-11;15!CL:0000346;2.71e-10;3!CL:1000428;2.71e-10;3!CL:1000497;4.22e-10;17!CL:0002518;4.22e-10;17!CL:1000746;1.60e-09;7!CL:1000612;1.60e-09;7!CL:0002581;3.69e-08;1!CL:0002591;3.69e-08;1!CL:1000507;8.97e-07;10!CL:1000494;8.97e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.29e-11,15;CL:0000346,2.59e-10,3;CL:1000428,2.59e-10,3;CL:1000497,3.18e-10,17;CL:0002518,3.18e-10,17;CL:1000746,1.11e-09,7;CL:1000612,1.11e-09,7;CL:0002581,2.89e-08,1;CL:0002591,4.41e-08,1;CL:1000507,7.73e-07,10;CL:1000494,7.73e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.36e-08!79;UBERON:0007798!2.36e-08!79;UBERON:0001637!1.28e-07!42;UBERON:0003509!1.28e-07!42;UBERON:0004572!1.28e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.79e-11;15!UBERON:0004819;1.79e-11;15!UBERON:0001285;1.79e-11;15!UBERON:0007684;1.79e-11;15!UBERON:0000412;2.71e-10;3!UBERON:0001992;2.71e-10;3!UBERON:0000074;1.60e-09;7!UBERON:0001229;1.60e-09;7!UBERON:0002113;4.34e-07;24!UBERON:0011143;4.34e-07;24!UBERON:0004211;8.97e-07;10!UBERON:0009773;8.97e-07;10!UBERON:0001231;8.97e-07;10!UBERON:0004810;8.97e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.29e-11,15;UBERON:0009773,1.29e-11,15;UBERON:0001231,1.29e-11,15;UBERON:0001285,1.29e-11,15;UBERON:0007684,1.29e-11,15;UBERON:0004208,1.29e-11,15;UBERON:0006555,7.09e-11,16;UBERON:0004819,7.09e-11,16;UBERON:0000412,2.59e-10,3;UBERON:0001992,2.59e-10,3;UBERON:0010532,1.11e-09,7;UBERON:0000074,1.11e-09,7;UBERON:0001229,1.11e-09,7;UBERON:0001230,1.11e-09,7;UBERON:0003220,1.11e-09,7;UBERON:0005749,1.11e-09,7;UBERON:0004199,1.11e-09,7;UBERON:0004209,1.11e-09,7;UBERON:0004198,1.11e-09,7;UBERON:0005103,1.58e-08,8;UBERON:0000083,1.58e-08,8;UBERON:0009201,1.58e-08,8;UBERON:0006553,1.58e-08,8;UBERON:0003074,1.58e-08,8;UBERON:0003060,1.58e-08,8;UBERON:0000080,1.25e-07,9;UBERON:0002120,1.25e-07,9;UBERON:0004875,1.25e-07,9;UBERON:0005721,1.25e-07,9;UBERON:0005754,1.25e-07,9;UBERON:0007297,1.25e-07,9;UBERON:0007503,3.04e-07,78;UBERON:0004810,7.73e-07,10 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0,0,0.982935746006035,3.48900583986214,0,0.263766978228454,0,0,3.36162573225888,1.20538905604795,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.410623275218653,0.627713197974014,0,0.492603536699674,0.0787107813136792,0.786728553697808,0,0,0,0,0.369754010166788,0.309868802321207,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0.670700859703636,0,0,1.50401373190767,0.144846518960824,0,0,0.661743720148475,0.221729397462564,0.351339142772504,4.97720486891308,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.596287222100115,0,0,0,0,0.825354125820202,0.417989933073621,0.516833518338658,0,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,1.62028389576352,0,0,0,0,0,0.549605231791222,1.31780417436063,0,0,0.496971951695318,0.379891534993739,0.264818361626438,0.286836620748814,0.709336764396714,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.647491777472526,0.421352420106746,0,0.245668634623536,0,0,0,0,1.43723628363248,0,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.567160915800105,0,0.427114777637135,0,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.168776332241266,0.389748020644795,0.252433774244115,0.184099797284599,0.161646056818812,1.06502877754984,0.302256294682921,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0,0,0,2.57296375277154,1.38134921352481,0.928735856063958,0.721879481669586,0,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0.0925884451585296,0.325808305310325,0,2.88662684050547,0.115930404975077,0.821860859650752,0.144366447761074,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0,0,0.571481048629521,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0.571652865261156,0.448524337381443,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0.799266537048298,0.142977993658148,0.542621605391443,0,0.325736184293735,0,0,0,0.871533458600294,0.499864955910285,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0.773288812777695,1.00509759200609,1.91381625495949,0,0,0,0.12269149171914,0,0.542530047399471,0.831883446123229,0.356857977594324,0.473107245101804,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0.511707249066704,0,1.48418066444991,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0,0,0,0.459257792658427,0.364182336013434,0.262248829918848,0,0.0770153371044148,2.35304930753057,1.46139224653261,0.211103257785751,0,0,0,1.54227252690289,0.812839312631559,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0.366277859273374,0.330037999682352,0,0,0,0.48335359146061,0.154048617114644,0.307007349452259,0.137836572484531,0.537101224341368,0.290033387828457,0.340906509664404,0.267096106940212,0,0.384380134730212,0,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,2.03856641014312,0.572499546967965,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0.404364963146632,0,0.842516912477962,0,0,0,0.272999822815972,0.141405431953713,1.13008116620243,1.10273068709225,0.66343897524122,0.876901770507525,0.578775534266688,0,0.608731130888112,0.30982349809975,0.845086807596724,0.143411352204052,0,0.35667105148125,0,0,0.329294892959902,0.75894634753143,0.699869440489966,0,0,1.08890984861323,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0.213425530045242,1.11598390910176,0,0,0.211673582723883,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0.338583555603207,0.802940375518498,0.201799707191048,0,0,0,0.223676107892416,0.333698283423817,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.63337622438398,0.398495976502139,0.552567831062295,0,0.20453736500431,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.341826167541004,0,0,0.217294743844016,0.31900115973192,0.54958556041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| |||
|short_description=p14@CFL1 | |||
}} |
Revision as of 08:43, 11 January 2014
Short description: | p14@CFL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CFL1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -37bp_to_ENST00000531413_5end |
EntrezGene: | CFL1 |
HGNC: | 1874 |
UniProt: | G3V1A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.29e-11 | 15 |
hair follicle dermal papilla cell | 2.59e-10 | 3 |
stem cell of epidermis | 2.59e-10 | 3 |
kidney cell | 3.18e-10 | 17 |
kidney epithelial cell | 3.18e-10 | 17 |
glomerular cell | 1.11e-09 | 7 |
kidney corpuscule cell | 1.11e-09 | 7 |
perirenal preadipocyte | 2.89e-08 | 1 |
smooth muscle cell of the pulmonary artery | 4.41e-08 | 1 |
kidney tubule cell | 7.73e-07 | 10 |
nephron tubule epithelial cell | 7.73e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.29e-11 | 15 |
renal tubule | 1.29e-11 | 15 |
nephron tubule | 1.29e-11 | 15 |
nephron | 1.29e-11 | 15 |
uriniferous tubule | 1.29e-11 | 15 |
nephrogenic mesenchyme | 1.29e-11 | 15 |
excretory tube | 7.09e-11 | 16 |
kidney epithelium | 7.09e-11 | 16 |
dermal papilla | 2.59e-10 | 3 |
papillary layer of dermis | 2.59e-10 | 3 |
primitive nephron | 1.11e-09 | 7 |
renal glomerulus | 1.11e-09 | 7 |
renal corpuscle | 1.11e-09 | 7 |
glomerular capsule | 1.11e-09 | 7 |
metanephric mesenchyme | 1.11e-09 | 7 |
glomerular tuft | 1.11e-09 | 7 |
S-shaped body | 1.11e-09 | 7 |
renal vesicle | 1.11e-09 | 7 |
comma-shaped body | 1.11e-09 | 7 |
mesonephric epithelium | 1.58e-08 | 8 |
mesonephric tubule | 1.58e-08 | 8 |
nephric duct | 1.58e-08 | 8 |
renal duct | 1.58e-08 | 8 |
mesonephric duct | 1.58e-08 | 8 |
pronephric duct | 1.58e-08 | 8 |
mesonephros | 1.25e-07 | 9 |
pronephros | 1.25e-07 | 9 |
nephrogenic cord | 1.25e-07 | 9 |
pronephric mesoderm | 1.25e-07 | 9 |
rostral part of nephrogenic cord | 1.25e-07 | 9 |
presumptive pronephric mesoderm | 1.25e-07 | 9 |
epithelial vesicle | 3.04e-07 | 78 |
nephron tubule epithelium | 7.73e-07 | 10 |