FFCP PHASE1:Hg19::chr11:101000537..101000553,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5241 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8910 | |||
|TSSclassifier=strong | |||
|UniProt=F5GXE8,P06401,Q8TDS3 | |||
|association_with_transcript=0bp_to_ENST00000537623,NM_000926,uc001pgh.2,uc001pgi.2,uc001pgj.2,uc009yww.1,uc009ywx.1_5end | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_1_at_PGR_5end | |||
|id=chr11:101000537..101000553,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.43e-09;2!UBERON:0005062;5.74e-09;4!UBERON:0007284;5.74e-09;4!UBERON:0004872;8.70e-09;7!UBERON:0006965;9.18e-09;2!UBERON:0006603;5.00e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;8.41e-10;4!DOID:1612;8.41e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.94e-10,4;DOID:1612,8.94e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.17e-72!115;UBERON:0001049!7.80e-27!57;UBERON:0005068!7.80e-27!57;UBERON:0006241!7.80e-27!57;UBERON:0007135!7.80e-27!57;UBERON:0003075!7.57e-23!86;UBERON:0007284!7.57e-23!86;UBERON:0002346!2.88e-21!90;UBERON:0002616!9.27e-21!59;UBERON:0005743!1.22e-20!86;UBERON:0001017!1.11e-19!82;UBERON:0003080!2.37e-19!42;UBERON:0000073!8.38e-19!94;UBERON:0001016!8.38e-19!94;UBERON:0000955!2.23e-18!69;UBERON:0006238!2.23e-18!69;UBERON:0002780!4.47e-18!41;UBERON:0001890!4.47e-18!41;UBERON:0006240!4.47e-18!41;UBERON:0002020!3.90e-16!34;UBERON:0003528!3.90e-16!34;UBERON:0001893!1.03e-15!34;UBERON:0002791!8.00e-15!33;UBERON:0001869!5.01e-14!32;UBERON:0003056!3.11e-13!61;UBERON:0002308!2.22e-12!9;UBERON:0000125!2.22e-12!9;UBERON:0004111!7.95e-11!241;UBERON:0004121!1.35e-10!169;UBERON:0000033!2.16e-10!123;UBERON:0000153!4.42e-10!129;UBERON:0007811!4.42e-10!129;UBERON:0000924!4.64e-10!173;UBERON:0006601!4.64e-10!173;UBERON:0000025!6.15e-10!194;UBERON:0009663!9.25e-10!7;UBERON:0002420!2.30e-09!9;UBERON:0007245!2.30e-09!9;UBERON:0010009!2.30e-09!9;UBERON:0010011!2.30e-09!9;UBERON:0000454!2.30e-09!9;UBERON:0002619!4.07e-09!22;UBERON:0002298!6.49e-09!8;UBERON:0001950!1.10e-08!20;UBERON:0003076!1.18e-08!15;UBERON:0003057!1.18e-08!15;UBERON:0000477!4.54e-08!286;UBERON:0000956!1.07e-07!25;UBERON:0000203!1.07e-07!25;UBERON:0000062!4.83e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;8.37e-12;3!UBERON:0000946;8.37e-12;3!UBERON:0005904;1.46e-09;4!UBERON:0000007;6.09e-09;2!UBERON:0003135;1.55e-08;11!UBERON:0002133;1.61e-08;2!UBERON:0000473;1.08e-07;8!UBERON:0007023;2.72e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.45e-20,114;UBERON:0003978,5.13e-12,3;UBERON:0009751,5.13e-12,3;UBERON:0000946,5.13e-12,3;UBERON:0002523,5.13e-12,3;UBERON:0005983,5.13e-12,3;UBERON:0002165,5.13e-12,3;UBERON:0002062,5.13e-12,3;UBERON:0007280,5.13e-12,3;UBERON:0005904,1.27e-09,4;UBERON:0000007,7.28e-09,2;UBERON:0002133,9.57e-09,2;UBERON:0003135,1.27e-08,11;UBERON:0000473,8.51e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8182924650087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3216351836742,3.43394464837949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19125739901845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22896305723383,1.3420566473545,2.50273712567863,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,5.37969568277888,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.371072392647405,0,3.38556089410803,0,3.62499787717397,0,0,0,0,0.291604613383254,0.173624994933292,3.54296554325536,0.241192877250816,1.52581736317083,0.331737779793674,0,0.658156191461918,0,0,42.476542694096,0,0,0,0,0.957003479195758,2.28993983504656,0,0,0,0,0.902382642468723,2.54881294613061,1.51039428278258,9.48768663620925,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.505492637027904,0.751617097072463,0.518440956986236,0,0,0,0,0,0,0,0,0,6.29016005671309,0,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0.859530882839914,0,1.95497680890578,1.3749625440701,2.87149209830726,0.998395002494955,2.57535628881943,1.56220020209311,1.41085292222125,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0.121499113316049,0,0.394028536495991,0,0,0,1.53532157855556,0.714695326373367,1.98627591109629,0,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0.517131825446202,1.19009341568421,0,0,0.640724475406168,2.98688179689365,0.414239055347196,0,0,0,0,0,1.0027595760908,0.306345576763462,0,0,0.886068179966986,0,0.751145584238999,0,0.776503360757966,0.248385611765534,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,1.66262682694747,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.192687675289379,0,0.957803154342908,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,12.7105454910245,0,1.56302802246618,0,0,0,0.202612753855184,0,0.413373593002368,0.19024743058172,0,0,0.496211178389294,0,0,0,0,3.03482802118316,2.50428410486427,1.33053555243958,0,0,0.339848664884159,0.0657727735628491,0,0,3.9246546425257,0.157115589916002,0.280272163313789,0,0,0,0.714765441766563,0,0,0,0,0,0,0,3.44181887056222,0,0,5.08064460229115,0,0,0,0,0,0,0,0.410651227424988,1.1598144313382,0,0,0,0,0.11294608203896,0,6.49140227336696,1.69783147837478,0,0,0.735444965261716,0,0.392616934229891,0.594092800654172,1.2679671827502,0,0.469919589899268,0.902410431630081,0,0,0,0,0,4.58729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74291005901951,1.33982065078089,0,0.103432995861895,0.213233981900981,0,0,0,0,0.25458863311266,0,0.653150243690884,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,156.713531442435,13.8344700627351,2.66302709674205,1.00636896795513,0 | |||
|short_description=p1@PGR | |||
}} |
Revision as of 09:59, 11 January 2014
Short description: | p1@PGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PGR_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000537623, NM_000926, uc001pgh.2, uc001pgi.2, uc001pgj.2, uc009yww.1, uc009ywx.1_5end |
EntrezGene: | PGR |
HGNC: | 8910 |
UniProt: | F5GXE8P06401Q8TDS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.45e-20 | 114 |
valve | 5.13e-12 | 3 |
cardiac mesenchyme | 5.13e-12 | 3 |
cardial valve | 5.13e-12 | 3 |
tunica intima | 5.13e-12 | 3 |
heart layer | 5.13e-12 | 3 |
endocardium | 5.13e-12 | 3 |
endocardial cushion | 5.13e-12 | 3 |
presumptive endocardium | 5.13e-12 | 3 |
duct of male reproductive system | 1.27e-09 | 4 |
pituitary gland | 7.28e-09 | 2 |
atrioventricular valve | 9.57e-09 | 2 |
male reproductive organ | 1.27e-08 | 11 |
testis | 8.51e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.94e-10 | 4 |
breast cancer | 8.94e-10 | 4 |