FFCP PHASE1:Hg19::chr12:7053172..7053197,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113246 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29521 | |||
|TSSclassifier=strong | |||
|UniProt=Q99622 | |||
|association_with_transcript=0bp_to_ENST00000229281_5end | |||
|description=CAGE_peak_1_at_C12orf57_5end | |||
|id=chr12:7053172..7053197,+ | |||
|ontology_enrichment_celltype=CL:0000192!2.57e-10!42;CL:0000514!2.57e-10!42;CL:0000791!8.00e-10!18;CL:0000789!8.00e-10!18;CL:0002420!8.00e-10!18;CL:0002419!8.00e-10!18;CL:0000790!8.00e-10!18;CL:0000183!1.88e-09!59;CL:0000393!2.03e-09!60;CL:0000211!2.03e-09!60;CL:0000359!2.35e-09!32;CL:0000187!1.27e-08!54;CL:0000055!1.58e-08!180;CL:0000084!9.27e-08!25;CL:0000827!9.27e-08!25;CL:0000680!1.04e-07!57;CL:0000056!1.04e-07!57;CL:0000355!1.04e-07!57;CL:0000625!2.10e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.18e-10;18!CL:0000789;8.18e-10;18!CL:0002419;8.18e-10;18!CL:0000359;7.94e-09;32!CL:0000084;9.59e-08;25!CL:0000192;1.89e-07;43!CL:0000625;2.10e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.92e-10,43;CL:0000514,3.92e-10,43;CL:0000791,8.00e-10,18;CL:0000789,8.00e-10,18;CL:0002420,8.00e-10,18;CL:0002419,8.00e-10,18;CL:0000790,8.00e-10,18;CL:0000359,2.35e-09,32;CL:0000393,2.62e-09,61;CL:0000211,2.62e-09,61;CL:0000187,1.64e-08,55;CL:0000084,9.27e-08,25;CL:0000827,9.27e-08,25;CL:0000680,1.29e-07,58;CL:0000056,1.29e-07,58;CL:0000355,1.29e-07,58;CL:0000625,2.10e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.18e-10;18!CL:0000514;1.89e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!1.15e-07!61;UBERON:0002036!1.15e-07!61;UBERON:0003082!1.15e-07!61;UBERON:0002385!1.73e-07!63;UBERON:0001015!1.73e-07!63;UBERON:0000383!1.73e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.40e-07,62;UBERON:0002036,1.40e-07,62;UBERON:0003082,1.40e-07,62;UBERON:0002385,2.08e-07,64;UBERON:0001015,2.08e-07,64;UBERON:0000383,2.08e-07,64;UBERON:0007503,9.11e-07,78 | |||
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| |||
|short_description=p1@C12orf57 | |||
}} |
Revision as of 11:50, 11 January 2014
Short description: | p1@C12orf57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf57_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000229281_5end |
EntrezGene: | C12orf57 |
HGNC: | 29521 |
UniProt: | Q99622 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.92e-10 | 43 |
smooth muscle myoblast | 3.92e-10 | 43 |
mature alpha-beta T cell | 8.00e-10 | 18 |
alpha-beta T cell | 8.00e-10 | 18 |
immature T cell | 8.00e-10 | 18 |
mature T cell | 8.00e-10 | 18 |
immature alpha-beta T cell | 8.00e-10 | 18 |
vascular associated smooth muscle cell | 2.35e-09 | 32 |
electrically responsive cell | 2.62e-09 | 61 |
electrically active cell | 2.62e-09 | 61 |
muscle cell | 1.64e-08 | 55 |
T cell | 9.27e-08 | 25 |
pro-T cell | 9.27e-08 | 25 |
muscle precursor cell | 1.29e-07 | 58 |
myoblast | 1.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-07 | 58 |
CD8-positive, alpha-beta T cell | 2.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.40e-07 | 62 |
striated muscle tissue | 1.40e-07 | 62 |
myotome | 1.40e-07 | 62 |
muscle tissue | 2.08e-07 | 64 |
musculature | 2.08e-07 | 64 |
musculature of body | 2.08e-07 | 64 |
epithelial vesicle | 9.11e-07 | 78 |