FFCP PHASE1:Hg19::chr12:12713844..12713856,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17909 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-24bp_to_ENST00000536236_5end | |||
|description=CAGE_peak_29_at_DUSP16_5end | |||
|id=chr12:12713844..12713856,- | |||
|ontology_enrichment_celltype=CL:1000415!1.13e-07!2;CL:0000181!2.20e-07!12;CL:0000417!2.20e-07!12;CL:0000668!2.20e-07!12;CL:0000414!2.20e-07!12;CL:0000412!2.20e-07!12;CL:0000182!2.20e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-17;12!CL:0000138;1.38e-09;6!CL:0000153;8.14e-07;9!CL:0000447;8.14e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.85e-17,12;CL:0000058,1.32e-09,6;CL:0000138,1.32e-09,6;CL:0000153,7.91e-07,9;CL:0000447,7.91e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.14e-19;11!UBERON:0009497;2.84e-16;13!UBERON:0001041;1.17e-07;30!UBERON:0003104;3.58e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;3.10e-50;1!DOID:4549;3.10e-50;1!DOID:5861;3.10e-50;1!DOID:6496;3.10e-50;1!DOID:201;1.38e-09;6!DOID:0060100;1.38e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.42e-50,1;DOID:4549,2.42e-50,1;DOID:5861,2.42e-50,1;DOID:6496,2.42e-50,1;DOID:201,1.32e-09,6;DOID:0060100,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000077!1.91e-11!130;UBERON:0004921!2.23e-10!129;UBERON:0004185!2.23e-10!129;UBERON:0001007!2.17e-09!155;UBERON:0001555!2.17e-09!155;UBERON:0007026!2.17e-09!155;UBERON:0001041!2.46e-09!98;UBERON:0004119!4.23e-08!169;UBERON:0000925!4.23e-08!169;UBERON:0006595!4.23e-08!169;UBERON:0009497!7.40e-08!25;UBERON:0000015!7.40e-08!25;UBERON:0002423!7.40e-08!25;UBERON:0006235!7.40e-08!25;UBERON:0004161!7.40e-08!25;UBERON:0005911!3.47e-07!82;UBERON:0008947!3.77e-07!38;UBERON:0003258!3.77e-07!38;UBERON:0000065!9.44e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;8.69e-18;3!UBERON:0004755;8.69e-18;3!UBERON:0002107;1.72e-11;19!UBERON:0006925;1.72e-11;19!UBERON:0002423;5.49e-09;25!UBERON:0002368;3.58e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,8.00e-18,3;UBERON:0004755,8.00e-18,3;UBERON:0002107,1.91e-11,19;UBERON:0006925,1.91e-11,19;UBERON:0008836,1.91e-11,19;UBERON:0008835,4.96e-10,22;UBERON:0003894,4.96e-10,22;UBERON:0009854,1.22e-09,23;UBERON:0007499,5.95e-09,25;UBERON:0009497,5.95e-09,25;UBERON:0000015,5.95e-09,25;UBERON:0002423,5.95e-09,25;UBERON:0006235,5.95e-09,25;UBERON:0004161,5.95e-09,25;UBERON:0009856,1.20e-08,26;UBERON:0002365,2.05e-07,31;UBERON:0002330,2.05e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0.221533894583621,1.89562704635511,0.128091319725675,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0.984678443688556,0,0,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.524759999977174,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6768664071385,0,0,0,0,0.391102765469606,0.0801588202515337,0,0,0.576361668616424,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.86661500537946,1.56590130924216,1.07845670166696,0.0984274815147488,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0.90356865631168,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p29@DUSP16 | |||
}} |
Revision as of 12:17, 11 January 2014
Short description: | p29@DUSP16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_DUSP16_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000536236_5end |
EntrezGene: | DUSP16 |
HGNC: | 17909 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.85e-17 | 12 |
chondroblast | 1.32e-09 | 6 |
chondrocyte | 1.32e-09 | 6 |
GAG secreting cell | 7.91e-07 | 9 |
carbohydrate secreting cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 8.00e-18 | 3 |
skeletal tissue | 8.00e-18 | 3 |
liver | 1.91e-11 | 19 |
digestive gland | 1.91e-11 | 19 |
liver bud | 1.91e-11 | 19 |
hepatic diverticulum | 4.96e-10 | 22 |
liver primordium | 4.96e-10 | 22 |
digestive tract diverticulum | 1.22e-09 | 23 |
epithelial sac | 5.95e-09 | 25 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
sac | 1.20e-08 | 26 |
exocrine gland | 2.05e-07 | 31 |
exocrine system | 2.05e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.42e-50 | 1 |
extraosseous chondrosarcoma | 2.42e-50 | 1 |
myxoid chondrosarcoma | 2.42e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 2.42e-50 | 1 |
connective tissue cancer | 1.32e-09 | 6 |
musculoskeletal system cancer | 1.32e-09 | 6 |