FFCP PHASE1:Hg19::chr12:54394309..54394336,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3225 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5130 | |||
|TSSclassifier=weak | |||
|UniProt=Q8N561 | |||
|association_with_transcript=334bp_to_BC032769_5end | |||
|description=CAGE_peak_2_at_HOXC9_5end | |||
|id=chr12:54394309..54394336,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.13e-12!180;CL:0000136!5.98e-11!15;CL:0002334!4.09e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.63e-13;13!CL:0002334;7.08e-11;12!CL:0000188;5.62e-08;9!CL:0002540;1.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.80e-12,15;CL:0002334,5.80e-11,12;CL:0000188,3.52e-08,9;CL:0002540,1.64e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.05e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.42e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001013!1.06e-08!14;UBERON:0003886!5.01e-08!63;UBERON:0002100!1.87e-07!216;UBERON:0002553!9.75e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.87e-12;16!UBERON:0002036;3.87e-12;16!UBERON:0004457;2.38e-09;9!UBERON:0000042;2.38e-09;9!UBERON:0001013;2.79e-09;14!UBERON:0003688;5.99e-08;6!UBERON:0002358;5.99e-08;6!UBERON:0003684;5.99e-08;6!UBERON:0001178;5.99e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.65e-09,14;UBERON:0003688,4.84e-08,6;UBERON:0002358,4.84e-08,6;UBERON:0003684,4.84e-08,6;UBERON:0001178,4.84e-08,6;UBERON:0002100,7.47e-07,199 | |||
|phase1_expression=9.6289541013395,11.3473277662221,6.06103937612676,11.0080628188443,8.93922188854576,9.59572376510406,2.53299878168311,0.631719873426831,1.30592814099919,0.491467873003018,0,0,0,1.73272894144065,2.98257638155124,0,2.41077811209591,1.46062018077475,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.80719576192283,1.50401373190767,3.0417768981773,3.1811437882044,0.486634870302636,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,1.61131726843659,4.56163263431108,0.488124115096339,0,0,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,1.09921046358244,0,0,0,2.98183171017191,0.12663051166458,0.397227542439656,0,1.06400514659507,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0,1.19558944441441,3.64046945795671,2.26622122115384,1.54495887372473,0,0,0,0,0,7.28129089550421,15.8095991199572,0,0,0,0,0,0,0.226864366320042,0.717558542755448,1.06778694409284,2.7551147150743,0,4.01904864029912,0.257640540045629,3.16398655763703,0.506328996723799,3.50773218580315,1.26216887122057,3.68199594569197,0,0.710019185033229,2.51880245569101,2.37384829234683,0,0,0,0,0,0,0,0,0,0,0,0,8.8229906326076,5.0531563716871,0.709840800239063,0.842923450390509,0.482022059766964,0.110293972732394,0.871517776369625,0.949082476444386,0.943819157121151,0.784885860501384,1.53898862778556,0,2.80483547606892,0,1.47008711385542,0,0,0,0,0,0,0.658501712451753,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,1.52249488594842,1.16253575405585,2.30029607499127,0,0,0.414656231081544,0,0.12624243342638,2.22242630022592,5.72982638337417,1.17217447210047,0,3.18765227380303,4.80548892550268,4.28739648945867,0,0,0,2.58543431515556,10.7296933755565,1.690605505112,0.531876233169741,1.04007436911366,4.8869401109807,14.1849132023278,4.79559922228979,0,1.62786481617433,3.29296134712308,1.95441710576241,0,0,0.602878754119172,0.871533458600294,2.69927076191554,0,0,0,0,0,2.85273810081437,3.76431397335706,0.61642896765115,4.1184021545176,0,0,0,0,0,0,0,0,0,0,0,0,1.59498939234882,3.00102312635806,2.17012018959788,0,0,0,0,1.80567659836631,13.6444502433591,2.0694614258501,2.65690239414175,1.65932251687533,1.39013783148933,0,0,0,0,0,0,0,0,9.6762045049323,0.920771839728375,9.26178311629143,5.89440086576224,4.60536524160033,3.86049410744658,2.96836132889982,5.70575867069826,5.68197521002007,4.02423064467665,2.07701771673448,4.88083589531829,0,0.200506470303285,0,0,0,0.131124414959424,0.451199612907412,0.616122696835318,3.13739907670742,2.92278449306521,1.16106791782163,0,0.170093705276516,2.15915916102139,0,3.52230368807009,4.51520796469368,1.78413391131527,2.49322802678617,3.58199607555485,0,0,0,0,0,0.103041011647722,0.640986253728404,0.330037999682352,0.574265537996172,4.55042172225565,3.21367859688319,3.19013370364003,2.15668063960502,1.84204409671355,3.30807773962873,2.90034661144339,2.90033387828457,3.92042486114064,2.1367688555217,0,0,0,0,0.929691098594572,0,0,1.54016790088044,0.532306030317022,0,0.18532421910392,0,0,0,0,0.767693373934002,0,0,0,0.539617372749944,0,0.235624804691373,0.808729926293264,0,0,0,6.58026422004468,10.5650146756755,0,0,0,0.551365343546124,0,0.876901770507525,0,0,2.84074527747786,1.8589409885985,1.69017361519345,1.86434757865267,1.57198465620994,2.85336841185,0,1.47775344708365,2.96365403663912,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,3.80921266106924,1.8204078262427,0,2.27308917445131,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0.796991953004279,0.828851746593443,0.251932747854276,1.73856760253663,0,0,0,0,0,0.493217028184668,0,5.55684950723184,0,0,0,0.260427761085233,0,7.97499532978273,0,0,0.236387681767936,0,0.291604613383254,1.38899995946634,0,0,0,0,0,0,0.435753854075961,0,0,0,1.84451123510448,0.628303510868405,0.760531603454056,0,0.274792780205587,0,0,0,0,0.451191321234361,0.588187602953219,0.839107934879214,0.37950746544837,0,0,0,0,0.216388639742091,0.995261931078505,0,0,0.296521128680622,0.988511511572023,2.19286093961456,0,1.60515529459758,0,0,0.391329237864179,0,0,0,0,0,1.05226393590145,2.17745201934219,0.664653872707185,0.330991955875499,2.19753042885058,1.19472429772959,0,1.24807205711825,0,0,0.34823682632161,0.873633341210151,1.0319161948297,1.45134496933628,1.24251839046515,0.739039113478883,0.290967049465258,0.529536760149002,0,3.28900619152202,3.17943378724783,0.0633107959558787,0,0,0,0.39961921916426,0.432271251462318,1.03082936549324,0,0,0,0.235694034616795,1.08723364858891,1.255234155748,0.713987523454252,0,0,0,0,5.58695073845944,0,0,0,0,0.199679000498991,0,0,0,1.44119953416961,5.82479747637269,0,0,0.0674035438541849,1.08270229666224,0,0,0,0,0,0,0,0,0,0,1.73372556058236,1.25891011523995,0,0.179287339332845,0.767660789277781,0,0,3.051222451857,2.71499800876856,0,0,1.19730191562487,0.164185041498678,1.70388021785422,3.17273856256352,0,0,0,0,2.05304205461195,0,0,0,0,0.992332043623902,0,0,0.638341257770182,8.70428485391158,7.0193170326356,10.7220951867212,10.4919241827137,0.628216385000937,0,0,0,0,0,0,1.52183498429854,0.74988244777264,1.97143852804142,1.14186133417987,0,0,0,4.6268988894931,5.37540612648616,5.54805861502613,4.16686611605196,3.0188148210309,4.44905610798268,0.686520205190771,0.151230923763239,0.777186002913902,0.73927574994817,5.73468361789329,0.449803112163605,4.9684146200403,1.65882483136342,3.98762571836992,4.69570555630561,1.6528336989694,1.90402606084398,2.84809513243263,3.09142720644351,1.28892668450986,3.24823631914946,2.78667122089031,2.80019435264208,0.686791410365586,5.05124233148879,3.78554694685953,0.385239660814607,2.78774068787403,0,5.66764813780681,2.31522474323834,1.71315693154527,1.61179956973339,3.08801447160972,2.41212454536578,0,1.15748422962549,0,0.256241518587947,0.345430341731199,0.303859956177382,0,0.194860308839388,0,0,1.63804924423206,0,1.47918486351039,0.19998739585493,0,0,1.13503190713367,0.368211900503681,0,0,0.255788742607303,0.970423302570136,0,1.20130602011215,0,0.212574920101683,0.123935764259002,0,2.54403480522735,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.235939446695481,0,0,0.381382095467167,4.8325194824207,0.994581110581374,0.977734268540344,0.80682027481408,0,0.261906694481422,0,0.591424344868181,0,0,0,0,0,0.548257766857182,2.97726707033577,0.175871244359621,1.78867398695433,0,0,0,0,0.0887023701626388,0,0,0,0,1.06374456795571,0,0.156986185701028,0,0.560544326627578,0,0.215927591218621,0,0,1.73814972905999,0.464965701472501,3.82488199065675,0,0,0,0,0,2.60330401607244,2.2155485237381,0,0.4582137370881,0,0,0.335566295393377,0.588901401691458,0,10.3588613950063,4.20917508110613,4.6392577253528,0.485710993059139,0,0.596852325484105,0.475680363110274,0.5647304101948,0.879524133963433,0.150962843566674,0.0771741581079447,0,0,0.245148321753905,0.707029641304878,0,0.297046400327086,5.4945244585842,5.26774055532232,0,0,0,0.892769693028288,1.05868461514708,0.160482733378337,0,0,0,1.41994405973866,0,0,0,3.71995018166751,4.62175628631418,4.32626562123789,0,0,0,0,0,0.459474497674225,0,0.833565680400634,0.267964130156178,0,0,0.426467963801962,0,0,0.124149428591716,0,0.190941474834495,0.606351566874658,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0.213454691755431,3.8614456457388,2.78458126530419,0,0.366724332548599,0,0.665756774185513,0.603821380773079,0 | |||
|short_description=p2@HOXC9 | |||
}} |
Revision as of 13:47, 11 January 2014
Short description: | p2@HOXC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 334bp_to_BC032769_5end |
EntrezGene: | HOXC9 |
HGNC: | 5130 |
UniProt: | Q8N561 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.80e-12 | 15 |
preadipocyte | 5.80e-11 | 12 |
cell of skeletal muscle | 3.52e-08 | 9 |
mesenchymal stem cell of the bone marrow | 1.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.65e-09 | 14 |
omentum | 4.84e-08 | 6 |
peritoneum | 4.84e-08 | 6 |
abdominal cavity | 4.84e-08 | 6 |
visceral peritoneum | 4.84e-08 | 6 |
trunk | 7.47e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.42e-08 | 14 |