FFCP PHASE1:Hg19::chr12:96588368..96588394,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3325 | |||
|TSSclassifier=strong | |||
|UniProt=F8VUJ0 | |||
|association_with_transcript=0bp_to_ENST00000547860_5end | |||
|coexpression_cluster_id=C3347 | |||
|description=CAGE_peak_3_at_ELK3_5end | |||
|id=chr12:96588368..96588394,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.98e-17!24;CL:0000115!3.16e-16!35;CL:0000071!3.58e-13!18;CL:0002546!3.58e-13!18;CL:0002078!7.50e-12!44;CL:0000222!2.85e-10!119;CL:0002057!6.15e-09!42;CL:0000213!7.83e-08!57;CL:0000215!7.83e-08!57;CL:1000413!2.55e-07!9;CL:0000860!4.67e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.50e-18;24!CL:0000115;2.75e-15;36!CL:0000071;5.92e-14;18!CL:0000860;2.80e-13;33!CL:0002057;2.80e-13;33!CL:0000473;6.89e-09;39!CL:0000234;6.89e-09;39!CL:0002078;1.85e-08;45!CL:1000413;1.04e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.97e-18,24;CL:0000115,7.47e-18,36;CL:0000071,7.08e-14,18;CL:0002546,7.08e-14,18;CL:0002078,6.31e-13,45;CL:0000860,5.09e-10,42;CL:0002057,5.09e-10,42;CL:0000222,8.24e-10,121;CL:0000213,1.59e-08,58;CL:0000215,1.59e-08,58;CL:0000473,2.34e-08,48;CL:0000234,2.34e-08,48;CL:1000413,1.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;5.92e-14;18!CL:0002057;4.32e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.27e-21!69;UBERON:0002049!5.35e-21!79;UBERON:0007798!5.35e-21!79;UBERON:0001981!2.04e-17!60;UBERON:0007500!2.04e-17!60;UBERON:0004537!2.04e-17!60;UBERON:0006965!2.04e-17!60;UBERON:0004872!2.13e-17!84;UBERON:0001009!1.31e-16!113;UBERON:0004535!3.59e-16!110;UBERON:0003914!6.03e-15!118;UBERON:0001986!3.58e-13!18;UBERON:0004638!3.58e-13!18;UBERON:0004852!3.58e-13!18;UBERON:0000468!6.42e-13!659;UBERON:0000480!2.12e-12!626;UBERON:0000467!3.31e-12!625;UBERON:0003081!2.20e-11!216;UBERON:0000487!8.37e-11!22;UBERON:0000922!1.83e-10!612;UBERON:0002050!2.96e-10!605;UBERON:0005423!2.96e-10!605;UBERON:0001637!3.38e-10!42;UBERON:0003509!3.38e-10!42;UBERON:0004572!3.38e-10!42;UBERON:0000923!5.79e-10!604;UBERON:0005291!5.79e-10!604;UBERON:0006598!5.79e-10!604;UBERON:0002532!5.79e-10!604;UBERON:0004111!1.51e-09!241;UBERON:0000477!6.30e-09!286;UBERON:0000119!1.43e-08!312;UBERON:0006914!1.53e-08!25;UBERON:0000926!2.19e-08!448;UBERON:0004120!2.19e-08!448;UBERON:0006603!2.19e-08!448;UBERON:0000483!6.09e-08!309;UBERON:0004573!1.56e-07!33;UBERON:0004571!1.56e-07!33;UBERON:0000025!1.96e-07!194;UBERON:0003915!2.55e-07!9;UBERON:0004700!2.55e-07!9;UBERON:0001917!2.55e-07!9;UBERON:0000490!4.38e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.92e-14;18!UBERON:0001986;5.92e-14;18!UBERON:0004852;5.92e-14;18!UBERON:0000487;3.39e-11;22!UBERON:0000055;8.25e-11;65!UBERON:0007500;2.02e-09;56!UBERON:0001981;2.02e-09;56!UBERON:0004537;2.02e-09;56!UBERON:0002049;4.42e-09;75!UBERON:0007798;4.42e-09;75!UBERON:0006914;6.85e-09;25!UBERON:0001637;7.87e-09;42!UBERON:0003509;7.87e-09;42!UBERON:0004572;7.87e-09;42!UBERON:0003914;1.03e-07;74!UBERON:0003915;1.04e-07;9!UBERON:0004700;1.04e-07;9!UBERON:0001917;1.04e-07;9!UBERON:0004573;1.18e-07;33!UBERON:0004571;1.18e-07;33!UBERON:0000947;9.92e-07;21!UBERON:0010191;9.92e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.87e-22,68;UBERON:0002049,4.79e-22,78;UBERON:0007798,4.79e-22,78;UBERON:0004872,9.89e-19,83;UBERON:0007500,1.87e-18,59;UBERON:0001981,1.87e-18,59;UBERON:0004537,1.87e-18,59;UBERON:0006965,1.87e-18,59;UBERON:0001009,4.24e-17,112;UBERON:0004535,1.23e-16,109;UBERON:0003914,1.67e-15,117;UBERON:0000926,8.40e-15,315;UBERON:0004120,8.40e-15,315;UBERON:0006603,8.40e-15,315;UBERON:0003081,4.61e-14,203;UBERON:0004638,7.08e-14,18;UBERON:0001986,7.08e-14,18;UBERON:0004852,7.08e-14,18;UBERON:0000487,2.63e-11,22;UBERON:0000922,2.96e-11,592;UBERON:0001637,1.33e-10,42;UBERON:0003509,1.33e-10,42;UBERON:0004572,1.33e-10,42;UBERON:0005423,6.68e-10,581;UBERON:0002050,9.38e-10,564;UBERON:0000923,3.94e-09,560;UBERON:0010316,3.94e-09,560;UBERON:0005291,3.94e-09,560;UBERON:0006598,3.94e-09,560;UBERON:0010317,3.94e-09,560;UBERON:0002532,3.94e-09,560;UBERON:0006914,4.98e-09,25;UBERON:0004111,2.15e-08,240;UBERON:0000490,5.06e-08,148;UBERON:0004573,8.72e-08,33;UBERON:0004571,8.72e-08,33;UBERON:0003915,1.14e-07,9;UBERON:0004700,1.14e-07,9;UBERON:0001917,1.14e-07,9;UBERON:0000119,3.35e-07,309;UBERON:0003103,6.34e-07,68 | |||
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| |||
|short_description=p3@ELK3 | |||
}} |
Revision as of 15:19, 11 January 2014
Short description: | p3@ELK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ELK3_5end |
Coexpression cluster: | C3347_Endothelial_acute_Hepatic_Renal_Lymphatic_large_CD14 |
Association with transcript: | 0bp_to_ENST00000547860_5end |
EntrezGene: | ELK3 |
HGNC: | 3325 |
UniProt: | F8VUJ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.97e-18 | 24 |
endothelial cell | 7.47e-18 | 36 |
blood vessel endothelial cell | 7.08e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.08e-14 | 18 |
meso-epithelial cell | 6.31e-13 | 45 |
classical monocyte | 5.09e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.09e-10 | 42 |
mesodermal cell | 8.24e-10 | 121 |
lining cell | 1.59e-08 | 58 |
barrier cell | 1.59e-08 | 58 |
defensive cell | 2.34e-08 | 48 |
phagocyte | 2.34e-08 | 48 |
endothelial cell of artery | 1.14e-07 | 9 |