FFCP PHASE1:Hg19::chr12:118498888..118498899,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55884 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19222 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000540129_5end | |||
|description=CAGE_peak_7_at_WSB2_5end | |||
|id=chr12:118498888..118498899,- | |||
|ontology_enrichment_celltype=CL:0000055!3.04e-15!180;CL:0000183!2.88e-08!59;CL:0000680!3.27e-08!57;CL:0000056!3.27e-08!57;CL:0000355!3.27e-08!57;CL:0000187!1.37e-07!54;CL:0000393!1.44e-07!60;CL:0000211!1.44e-07!60;CL:0000192!1.99e-07!42;CL:0000514!1.99e-07!42;CL:0002321!6.45e-07!248;CL:0000220!8.24e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.15e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.18e-07,58;CL:0000056,1.18e-07,58;CL:0000355,1.18e-07,58;CL:0000192,2.91e-07,43;CL:0000514,2.91e-07,43;CL:0000359,3.56e-07,32;CL:0000187,5.71e-07,55;CL:0002494,7.46e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!8.27e-09!70;UBERON:0001134!1.23e-08!61;UBERON:0002036!1.23e-08!61;UBERON:0003082!1.23e-08!61;UBERON:0000119!1.34e-08!312;UBERON:0000914!1.85e-08!83;UBERON:0002329!1.85e-08!83;UBERON:0003077!1.85e-08!83;UBERON:0003059!1.85e-08!83;UBERON:0007282!1.85e-08!83;UBERON:0009618!1.85e-08!83;UBERON:0007285!1.85e-08!83;UBERON:0000475!2.34e-08!365;UBERON:0000483!3.88e-08!309;UBERON:0002385!5.16e-08!63;UBERON:0001015!5.16e-08!63;UBERON:0000383!5.16e-08!63;UBERON:0000025!5.64e-08!194;UBERON:0003075!1.99e-07!86;UBERON:0007284!1.99e-07!86;UBERON:0000481!3.84e-07!347;UBERON:0005743!7.13e-07!86;UBERON:0000467!8.16e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,7.38e-09,192;UBERON:0001134,1.37e-07,62;UBERON:0002036,1.37e-07,62;UBERON:0003082,1.37e-07,62;UBERON:0010314,3.24e-07,132;UBERON:0000119,3.65e-07,309;UBERON:0002385,4.63e-07,64;UBERON:0001015,4.63e-07,64;UBERON:0000383,4.63e-07,64;UBERON:0002329,5.11e-07,71;UBERON:0003059,5.11e-07,71;UBERON:0007282,5.11e-07,71;UBERON:0004290,5.11e-07,71;UBERON:0009618,5.11e-07,71;UBERON:0003075,5.65e-07,82;UBERON:0007284,5.65e-07,82;UBERON:0007503,6.06e-07,78;UBERON:0000948,7.54e-07,24;UBERON:0005498,7.54e-07,24;UBERON:0004140,7.54e-07,24;UBERON:0009881,7.54e-07,24;UBERON:0004141,7.54e-07,24;UBERON:0003084,7.54e-07,24;UBERON:0007005,7.54e-07,24;UBERON:0004139,7.54e-07,24;UBERON:0004291,7.54e-07,24;UBERON:0003077,8.73e-07,72;UBERON:0007285,8.73e-07,72 | |||
|phase1_expression=1.99846217197612,1.49870366723688,0.986680828671798,0,2.23480547213644,3.48935409640147,0,1.89515962028049,0.522371256399677,1.96587149201207,0.697801167972428,0.218441372130172,0.791300934685361,0.866364470720326,1.65698687863958,0,1.20538905604795,0,0.487932798790507,0.369363174230364,1.63200552995402,0.313454721478088,1.71741592278634,1.36874425072884,2.38531015230125,0.916960868975415,0.57470412614962,0.393553906568396,0,0,0.154816123316076,0,0,1.10926203050036,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0,0.895661896959697,0.647787332037959,0.257575567634187,0.290796477559129,0,0.485168122375632,0.464858073811369,1.23350366406548,2.16794459626573,0.863077176966451,1.2808035326455,0.945928919554341,0.344745680736619,0.645484683583826,0,0.188242339542605,0.545812300115692,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0,0.852449501065388,0,2.26954089876456,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0.950452044448374,0,0.127986611154418,0,0,0,0.80642697289893,0.267440195783507,0.144824403882799,0,0.670700859703636,1.02290049474824,2.1686349143074,1.50401373190767,1.44846518960824,0,1.45990461090791,1.51255707462509,2.21729397462564,3.24988707064566,0.458426764241994,0,0,1.9472843619281,1.56716763569341,5.18536046023574,0,0,0,0.39752481473341,0,0,0.56530794192401,0.838998872419812,0.825354125820202,1.67195973229448,1.03366703667732,0.35576626268671,0.33472061276467,0.402829317109147,0,0.732186172644509,0.367663080345869,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.732806975721629,0,0,0,0.496971951695318,1.8994576749687,0.397227542439656,0,1.41867352879343,2.80338800071154,2.1349799145941,4.68668341992604,1.55605517699883,1.34710672069688,1.63461903113459,0.756787138224657,0.576175924479999,0.234321431833797,0.936480230490962,0.570471821544449,0.896692083310806,0,0.485618833104395,0.421352420106746,0.61246251376468,0.61417158655884,0.309977343527296,1.18800285728205,1.23633464639278,0,1.43723628363248,0.336672227908132,0.250237039743928,0.277064115484183,2.19488810440419,1.5324389789951,0.901428353439581,2.83580457900053,0,1.06778694409284,0.847727604638247,0.300091096084402,0.618315175430633,0.257640540045629,0.744467425326359,0.675105328965065,1.16924406193438,0.252433774244115,0.736399189138395,0.484938170456436,0.355009592516614,1.0075209822764,1.69560592310488,0.193260853163297,0,0,0.975789649036763,0.530119073285941,0.348581828608555,0.310983165046111,0.504641701751257,0,1.56449532329816,1.28648187638577,1.38134921352481,0.928735856063958,1.44375896333917,0.236613600079688,0.168584690078102,0.241011029883482,0.55146986366197,0.435758888184812,0.71181185733329,0.404493924480493,0.392442930250692,0,2.21446636387394,5.60967095213783,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,1.02940686179115,0.109750285408626,0,0.603173834469785,0.277765335475589,0.651616610620649,1.03993478527958,1.44331342025273,0.927443239800615,0.70445216541493,0.866198686566443,0,0.380508304469197,0,0,1.23108503043699,6.31811515875942,3.41851673264075,0,0.335964256397719,0.425325291727159,0.268675568108545,0,0.766765358330422,2.95597942737566,5.10680917276711,0.207328115540772,0.144119953416961,0.37872730027914,1.46045156871989,1.90994212779139,2.34434894420094,3.4214489204541,1.95372236136315,2.10240140490742,0,1.00917975910825,1.30788020649984,1.3200891447771,2.06834745212444,0,0.845302752556,2.6593811658487,2.08014873822732,2.57207374262142,1.41849132023278,2.93064396917709,1.14382394926518,0,0,1.62868092146868,0.355391948742546,0.791951872933429,0.904318131178758,3.48613383440118,2.39935178836937,1.2162378064119,1.00451418286425,0,2.39624855491583,0,0,0.434343920002738,2.87666851570537,1.79060963239896,0,0,0.215627574859517,0.128343036279748,0.76228387266739,0,2.31986643833309,0.502548796003046,0.637938751653163,0,0,0,0.858840442033979,2.00068208423871,1.08506009479894,2.07970861530807,1.24900292158013,0.473107245101804,1.05427273493442,2.40756879782175,0,1.03473071292505,3.32112799267718,4.60922921354258,0.521301686808497,0.783204629850962,3.0882908142977,0,0.215714200818617,0.106727557803444,0,0,0.907170879989041,0.992431231275107,0.153461973288062,1.96462066103151,1.15325234330131,3.07024349440022,4.82561763430822,0,2.46735510084249,3.55123450626254,1.39616165223476,1.03850885836724,2.32420756919918,0.241718899183244,0.802025881213139,0.552485933615378,1.60740227430449,2.91345868810747,1.83574180943194,0.451199612907412,0.462092022626489,0,1.46139224653261,0.422206515571503,1.13733384070897,0.170093705276516,0.863663664408557,0,1.35473218771926,1.50506932156456,1.01950509218015,0,0.6716242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| |||
|short_description=p7@WSB2 | |||
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Revision as of 16:09, 11 January 2014
Short description: | p7@WSB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_WSB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540129_5end |
EntrezGene: | WSB2 |
HGNC: | 19222 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.18e-07 | 58 |
myoblast | 1.18e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.18e-07 | 58 |
smooth muscle cell | 2.91e-07 | 43 |
smooth muscle myoblast | 2.91e-07 | 43 |
vascular associated smooth muscle cell | 3.56e-07 | 32 |
muscle cell | 5.71e-07 | 55 |
cardiocyte | 7.46e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
tube | 7.38e-09 | 192 |
skeletal muscle tissue | 1.37e-07 | 62 |
striated muscle tissue | 1.37e-07 | 62 |
myotome | 1.37e-07 | 62 |
structure with developmental contribution from neural crest | 3.24e-07 | 132 |
cell layer | 3.65e-07 | 309 |
muscle tissue | 4.63e-07 | 64 |
musculature | 4.63e-07 | 64 |
musculature of body | 4.63e-07 | 64 |
somite | 5.11e-07 | 71 |
presomitic mesoderm | 5.11e-07 | 71 |
presumptive segmental plate | 5.11e-07 | 71 |
dermomyotome | 5.11e-07 | 71 |
trunk paraxial mesoderm | 5.11e-07 | 71 |
neural plate | 5.65e-07 | 82 |
presumptive neural plate | 5.65e-07 | 82 |
epithelial vesicle | 6.06e-07 | 78 |
heart | 7.54e-07 | 24 |
primitive heart tube | 7.54e-07 | 24 |
primary heart field | 7.54e-07 | 24 |
anterior lateral plate mesoderm | 7.54e-07 | 24 |
heart tube | 7.54e-07 | 24 |
heart primordium | 7.54e-07 | 24 |
cardiac mesoderm | 7.54e-07 | 24 |
cardiogenic plate | 7.54e-07 | 24 |
heart rudiment | 7.54e-07 | 24 |
paraxial mesoderm | 8.73e-07 | 72 |
presumptive paraxial mesoderm | 8.73e-07 | 72 |