FFCP PHASE1:Hg19::chr13:40177342..40177361,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10186 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6586 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y693 | |||
|association_with_transcript=0bp_to_NM_005780,uc001uxf.2_5end | |||
|coexpression_cluster_id=C3371 | |||
|description=CAGE_peak_2_at_LHFP_5end | |||
|id=chr13:40177342..40177361,- | |||
|ontology_enrichment_celltype=CL:0000057!2.17e-10!75;CL:0000055!2.83e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.61e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.71e-10,76;CL:0000136,4.67e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.89e-13!659;UBERON:0000475!5.71e-13!365;UBERON:0000924!9.25e-13!173;UBERON:0006601!9.25e-13!173;UBERON:0004121!3.40e-12!169;UBERON:0007023!2.27e-11!115;UBERON:0000467!2.36e-10!625;UBERON:0000480!3.30e-10!626;UBERON:0004923!2.29e-09!57;UBERON:0002616!2.40e-09!59;UBERON:0000073!2.55e-09!94;UBERON:0001016!2.55e-09!94;UBERON:0000119!3.41e-09!312;UBERON:0005743!3.82e-09!86;UBERON:0001017!6.23e-09!82;UBERON:0002346!1.28e-08!90;UBERON:0000064!1.37e-08!219;UBERON:0000483!2.03e-08!309;UBERON:0000955!3.28e-08!69;UBERON:0006238!3.28e-08!69;UBERON:0001049!3.31e-08!57;UBERON:0005068!3.31e-08!57;UBERON:0006241!3.31e-08!57;UBERON:0007135!3.31e-08!57;UBERON:0003075!4.27e-08!86;UBERON:0007284!4.27e-08!86;UBERON:0000033!4.59e-08!123;UBERON:0000153!1.25e-07!129;UBERON:0007811!1.25e-07!129;UBERON:0000481!2.66e-07!347;UBERON:0000477!6.48e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.77e-11,114;UBERON:0004121,7.44e-11,171;UBERON:0000924,7.44e-11,171;UBERON:0006601,7.44e-11,171;UBERON:0010314,1.31e-10,132;UBERON:0004923,1.54e-10,66;UBERON:0001016,1.37e-07,89;UBERON:0002346,2.32e-07,86;UBERON:0000119,2.34e-07,309;UBERON:0010371,2.36e-07,104;UBERON:0001049,2.43e-07,56;UBERON:0005068,2.43e-07,56;UBERON:0006241,2.43e-07,56;UBERON:0007135,2.43e-07,56;UBERON:0001017,3.36e-07,81;UBERON:0003075,5.57e-07,82;UBERON:0007284,5.57e-07,82;UBERON:0000955,8.77e-07,68;UBERON:0006238,8.77e-07,68 | |||
|phase1_expression=7.08545679155171,2.14100523890983,7.18867460889453,6.00439790118782,6.70441641640932,9.59572376510406,2.53299878168311,3.15859936713415,2.87304191019822,2.21160542851358,0,2.62129646556207,3.16520373874144,3.09415882400117,1.65698687863958,0,1.20538905604795,0.730310090387373,2.92759679274304,3.20114750999649,2.65200898617529,2.82109249330279,0.85870796139317,1.50561867580173,1.63205431473244,1.29902789771517,1.23150884174919,0.787107813136792,0,0,0.154816123316076,0,0.6024118375565,0,2.32401601740905,2.13253848731132,1.17440175733939,0,0,0,0,0,0.257575567634187,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,1.27867425159808,0,0,0,0.290209238628584,0,1.24564449799115,0.251248665256743,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0.211255286311942,0,0.419317291016752,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,3.35350429851818,1.53435074212236,5.06014813338393,4.01070328508712,4.77993512570718,3.9764297352555,4.37971383272372,1.03988298880475,1.33037638477538,0.87834785693126,2.61958150995425,1.82147644146271,0.370784442784429,1.9472843619281,1.21890816109487,1.86141144726411,0.476981248610684,0,0.371457501329565,0.596287222100115,0.860234595106124,2.77712401286075,1.13061588384802,2.09749718104953,0.550236083880135,0.208994966536811,1.29208379584664,0.35576626268671,1.00416183829401,1.61131726843659,3.04108842287405,2.92874469057803,2.20597848207521,1.62028389576352,1.7859945656816,2.2452937262617,1.46394924628319,0,0,0.549605231791222,0,0,1.3082821564276,3.47880366186723,1.51956613997496,1.58891016975863,6.3104056564739,3.19201543978521,1.68203280042692,3.20246987189115,1.2333377420858,3.11211035399766,2.42479209725439,2.28846664358842,13.9248833433337,9.79499071615998,2.10889288650417,2.49728061464256,0,3.13842229158782,1.996386476944,1.29498355494505,2.24721290723598,1.22492502752936,1.84251475967652,3.09977343527296,9.50402285825643,7.66527480763526,6.37112953356618,5.74894513452991,0.841680569770331,1.12606667884768,4.15596173226274,6.14568669233173,3.67785354958824,8.86404547548921,1.24775401476023,3.40840307808838,6.83383644219416,3.39091041855299,3.60109315301283,4.32820622801443,2.31876486041066,5.02515512095292,3.71307930930786,1.85130309806277,2.52433774244115,5.06274442532646,3.23292113637624,5.68015348026583,2.01504196455281,1.69560592310488,0.193260853163297,1.36373060295417,3.15485054927904,0,0.265059536642971,0.348581828608555,0.725627385107593,0,0.72995471815166,7.8224766164908,6.43240938192885,1.38134921352481,7.42988684851167,7.21879481669586,0.709840800239063,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.474541238222193,0.134831308160164,0,0,3.69077727312324,2.80483547606892,2.4694440679884,1.47008711385542,0,0,0.590789906681404,0,0,4.28919525746314,1.86575485194663,2.24803506515239,1.91005047582099,1.66659201285353,0.325808305310325,1.03993478527958,0,1.97081688457631,1.17408694235822,2.88732895522148,3.24089858803628,4.18559134916116,0,0,0,0.234004265139238,0.297262324577456,0,1.6798212819886,1.41775097242386,2.7763142037883,1.74380363108377,0,0,0,0.621984346622316,0.720599767084807,0,0.888970520090367,0.763976851116555,0,0,0.925447434329912,0.901029173531752,0.285826432630578,8.52196241024741,10.0270815831654,4.2536205776151,2.45616259939778,7.15312891703765,2.535908257668,5.58470044828228,4.16029747645464,2.05765899409714,4.25547396069835,2.66422179016099,1.71573592389777,0.542621605391443,0.823240336780769,2.93162565864362,0.710783897485092,0.791951872933429,1.80863626235752,0,1.69954085009497,0,0,0,6.23024624278115,10.3375742250703,7.13184525203592,3.76431397335706,2.87666851570537,5.19276793395697,0,0,0.431255149719035,0,1.01637849688985,2.60279707715243,1.54657762555539,1.34013012267479,1.91381625495949,0,0,0,2.94459580125936,2.00068208423871,2.17012018959788,3.32753378449291,3.56857977594324,6.30809660135739,4.33423235473039,2.10662269809403,0,3.10419213877515,1.32845119707087,2.02806085395873,2.43274120510632,8.02784745597236,11.6668764095691,0,0,0,1.81876542867756,4.99306318531491,5.14063498660456,6.20269519546942,4.45039722535381,4.49056151092918,5.76626171650654,7.16390148693385,3.53878626515936,4.45254199334973,4.00945203886904,4.08391968220192,2.62806899244189,3.11552657510173,1.85936605535935,0,1.20303882181971,0.644566922551274,3.21480454860899,4.37018803216121,3.93373244878272,1.35359883872224,0.616122696835318,0.784349769176855,1.46139224653261,0.949964660035881,2.27466768141793,1.87103075804167,2.37507507712353,6.16909010761157,0.812839312631559,1.50506932156456,0.509752546090077,1.66215201785745,0.223874754722178,0,0,1.53870075069834,0.656029291399411,3.90454073597164,3.709476419318,1.37354197227515,1.48517099857058,6.89118645595407,2.60024098414608,3.21367859688319,2.32009723901093,3.69716681075147,2.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| |||
|short_description=p2@LHFP | |||
}} |
Revision as of 17:25, 11 January 2014
Short description: | p2@LHFP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LHFP_5end |
Coexpression cluster: | C3371_normal_left_heart_lung_diaphragm_aorta_tenocyte |
Association with transcript: | 0bp_to_NM_005780, uc001uxf.2_5end |
EntrezGene: | LHFP |
HGNC: | 6586 |
UniProt: | Q9Y693 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.71e-10 | 76 |
fat cell | 4.67e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.77e-11 | 114 |
ectoderm-derived structure | 7.44e-11 | 171 |
ectoderm | 7.44e-11 | 171 |
presumptive ectoderm | 7.44e-11 | 171 |
structure with developmental contribution from neural crest | 1.31e-10 | 132 |
organ component layer | 1.54e-10 | 66 |
nervous system | 1.37e-07 | 89 |
neurectoderm | 2.32e-07 | 86 |
cell layer | 2.34e-07 | 309 |
ecto-epithelium | 2.36e-07 | 104 |
neural tube | 2.43e-07 | 56 |
neural rod | 2.43e-07 | 56 |
future spinal cord | 2.43e-07 | 56 |
neural keel | 2.43e-07 | 56 |
central nervous system | 3.36e-07 | 81 |
neural plate | 5.57e-07 | 82 |
presumptive neural plate | 5.57e-07 | 82 |
brain | 8.77e-07 | 68 |
future brain | 8.77e-07 | 68 |