FFCP PHASE1:Hg19::chr13:46756351..46756390,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000460190_5end | |||
|coexpression_cluster_id=C2037 | |||
|description=CAGE_peak_2_at_LCP1_5end | |||
|id=chr13:46756351..46756390,- | |||
|ontology_enrichment_celltype=CL:0000037!1.12e-80!172;CL:0000566!1.12e-80!172;CL:0002032!8.37e-76!165;CL:0000837!8.37e-76!165;CL:0000988!2.03e-75!182;CL:0000738!8.65e-69!140;CL:0002031!2.43e-55!124;CL:0002087!6.19e-54!119;CL:0000763!1.72e-48!112;CL:0000049!1.72e-48!112;CL:0000766!2.61e-35!76;CL:0000557!2.99e-31!71;CL:0000839!7.07e-30!70;CL:0002009!1.54e-29!65;CL:0002194!4.64e-28!63;CL:0000576!4.64e-28!63;CL:0000040!4.64e-28!63;CL:0000559!4.64e-28!63;CL:0002057!1.35e-25!42;CL:0000860!9.63e-23!45;CL:0000542!1.00e-22!53;CL:0000051!1.00e-22!53;CL:0000838!4.51e-22!52;CL:0000945!2.44e-12!24;CL:0000826!2.44e-12!24;CL:0000134!3.61e-10!358;CL:0000084!4.73e-10!25;CL:0000827!4.73e-10!25;CL:0000451!2.95e-09!10;CL:0002320!6.75e-09!365;CL:0000990!5.80e-08!8;CL:0000791!4.32e-07!18;CL:0000789!4.32e-07!18;CL:0002420!4.32e-07!18;CL:0002419!4.32e-07!18;CL:0000790!4.32e-07!18;CL:0000094!5.66e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-20;33!CL:0002057;1.32e-20;33!CL:0000473;6.03e-20;39!CL:0000234;6.03e-20;39!CL:0000576;2.36e-19;48!CL:0000766;1.47e-17;69!CL:0002087;3.89e-17;104!CL:0000738;5.10e-17;136!CL:0000763;3.63e-15;100!CL:0000988;1.45e-14;177!CL:0000542;1.71e-14;53!CL:0000945;1.07e-13;24!CL:0000084;4.06e-11;25!CL:0000451;3.14e-10;10!CL:0000990;9.03e-09;8!CL:0000791;8.76e-08;18!CL:0000789;8.76e-08;18!CL:0002419;8.76e-08;18!CL:0000094;1.17e-07;8!CL:0000219;7.76e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.53e-93,168;CL:0000988,1.91e-89,177;CL:0002032,5.12e-88,161;CL:0000837,5.12e-88,161;CL:0000738,7.93e-81,136;CL:0002031,1.90e-65,120;CL:0002087,6.49e-64,115;CL:0000763,3.24e-57,108;CL:0000049,3.24e-57,108;CL:0000766,4.46e-43,72;CL:0000557,2.31e-38,67;CL:0000839,9.78e-37,66;CL:0002009,1.55e-36,61;CL:0002194,8.10e-35,59;CL:0000576,8.10e-35,59;CL:0000040,8.10e-35,59;CL:0000559,8.10e-35,59;CL:0000473,1.08e-31,48;CL:0000234,1.08e-31,48;CL:0000860,1.29e-28,42;CL:0002057,1.29e-28,42;CL:0000542,2.20e-25,53;CL:0000051,2.20e-25,53;CL:0000838,1.20e-24,52;CL:0000134,7.45e-15,354;CL:0000945,1.09e-13,24;CL:0000826,1.09e-13,24;CL:0002320,1.63e-13,361;CL:0000084,4.09e-11,25;CL:0000827,4.09e-11,25;CL:0000451,3.20e-10,10;CL:0000219,4.68e-10,386;CL:0000990,9.11e-09,8;CL:0000791,8.70e-08,18;CL:0000789,8.70e-08,18;CL:0002420,8.70e-08,18;CL:0002419,8.70e-08,18;CL:0000790,8.70e-08,18;CL:0000094,1.18e-07,8;CL:0002393,2.53e-07,9;CL:0002397,2.53e-07,9;CL:0000236,8.54e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-20;42!CL:0000049;4.89e-15;108!CL:0000051;1.71e-14;53!CL:0000790;8.76e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!2.25e-18!51;DOID:0060083!2.25e-18!51;DOID:1240!5.87e-14!39;DOID:8692!4.41e-10!31;DOID:0060058!6.01e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.83e-12;39!DOID:2531;1.34e-11;51!DOID:0060083;1.34e-11;51!DOID:8692;1.87e-10;31!DOID:0060058;1.24e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.37e-19,51;DOID:0060083,1.37e-19,51;DOID:1240,3.79e-15,39;DOID:8692,8.20e-11,31;DOID:0060058,1.26e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.92e-38!102;UBERON:0003061!7.92e-38!102;UBERON:0002193!4.32e-32!112;UBERON:0002371!5.07e-26!80;UBERON:0001474!1.08e-21!86;UBERON:0002405!2.04e-19!115;UBERON:0004765!2.07e-15!101;UBERON:0001434!2.07e-15!101;UBERON:0000178!6.63e-09!15;UBERON:0000179!6.63e-09!15;UBERON:0000463!6.63e-09!15;UBERON:0002384!3.34e-08!375;UBERON:0007023!1.17e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.00e-10;15!UBERON:0000179;8.00e-10;15!UBERON:0000463;8.00e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.23e-46,98;UBERON:0003061,2.23e-46,98;UBERON:0002193,2.39e-40,108;UBERON:0002371,9.66e-33,76;UBERON:0002405,2.05e-31,93;UBERON:0001474,4.97e-28,82;UBERON:0004765,1.41e-23,90;UBERON:0001434,8.39e-19,100;UBERON:0002384,1.77e-12,371;UBERON:0000178,7.96e-10,15;UBERON:0000179,7.96e-10,15;UBERON:0000463,7.96e-10,15;UBERON:0003081,5.75e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,8.3549538410513,1.39560233594486,1.74753097704138,0.527533956456907,0,0,5.3786011716142,0,0,0,0,0,0,0,0,0,93.5300086354924,97.6997014454355,102.796280395665,82.6064981382698,77.9173678137342,56.0434366404195,0,0,0,128.51808576272,143.590924812296,34.9384522808468,61.4934903470384,67.1823899024975,36.4578262802631,37.8417151465472,30.4460046057841,24.4696789252477,44.9280557828855,38.5433462562586,30.5655917096648,72.7502885514793,38.6497814740516,66.5868697424473,60.1277099953294,54.8183911972275,71.1811511964642,101.355230136566,88.4314016509842,105.632659543587,61.5552450304317,51.306356210875,66.2934279113,95.1920905273507,80.5531857960995,92.703883240861,53.435910630248,44.6798593072455,53.7043185671195,136.688551394063,82.8382428049064,128.301383293088,65.8271502972667,43.8045651472969,74.7129625785601,118.052903013507,130.370283139598,174.687237867368,112.176557031641,127.775184278991,96.4429769338529,87.3916750319732,119.540806701839,83.0951283223904,60.7077144168859,82.3515043604233,58.4525292046829,31.6793240030381,25.122376118058,31.1328238852244,21.7632413508919,30.0296990277009,21.2658402783159,33.713288512028,38.1621501814146,15.3687501659551,18.79159005987,14.5263826687587,26.4342657158052,18.4967825783907,29.7624015795837,20.4578160918386,10.6112905942274,20.7657513989504,27.7529582348526,15.6442687984123,16.5706732007157,9.74133642039557,40.3305853924328,20.6224135232386,25.6979317717001,26.5387786489715,25.1058986662323,25.1014540790565,23.350182453722,29.2931018852999,52.7441616037796,33.0679035851395,24.0786745280742,20.9071047609954,43.2841689104703,18.7778041864941,23.7102937383015,29.6033039662818,27.0780602175482,29.9498388773953,22.810849066761,32.3736506017211,38.9079297909432,52.4709051519853,42.8566826199671,25.4549679045524,27.6201238217883,15.2440911596599,13.0341963494519,0,0,0,0,0,0,0,0,0,0,0.351339142772504,2.29213382120997,0.364295288292542,1.11235332835329,124.301651769744,123.283854007881,79.5088603902814,124.969087135999,112.111002512905,93.2358328337208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,143.640655005309,329.613224526077,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,2.18196896472668,0,6.70855383712775,1.19276791489337,13.5946913157337,10.0551223364909,16.1485344560402,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,2.36315962672562,88.2926198829301,9.59309820636286,0,0,3.37205259772859,1.50793458617446,1.38882667737794,0,0,0,0,0,0,0,0,0,0,34.716597858323,141.3385761441,47.561971932393,3.74935335947108,0,0.141775097242386,16.7474437454326,13.0785272331283,18.7857512790953,60.1049150233051,33.1942596229862,18.0375460520472,14.1237554348622,13.1292130763435,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,35.2708963859452,19.5880265658529,44.2751272914366,0,0,0,0.144781306667579,0,0.358121926479791,61.1984886204659,40.3913058413951,22.2096402105303,23.2300895666345,0,0,0,1.00509759200609,0,314.582950057817,239.32916736322,370.07305349838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6205990270567,49.6142661882819,31.698084667623,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,9.54789651773816,0.200506470303285,0.644566922551274,0,0,0,1.35359883872224,4.31285887784723,0,1.46139224653261,1.79437769117889,0,0,0,0,0,0,0,0,0.447749509444357,5.26223703950243,4.18296721639841,0.256450125116389,0,0,12.3649213977267,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0.596586391912706,0,0.661139661443912,0.576570202095319,0.510450849978337,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02770547529675,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,12.6152693040884,1.29151611801369,0,0,3.67557440331135,79.6692746494506,53.5246044999663,67.7880152737253,70.9930690864211,83.5065414364974,94.028630122944,82.0847784601934,55.5187623405989,0,0,33.5705095894013,102.749155844522,34.1918034754174,73.2049568055181,69.988133727953,39.1175568008321,31.9813968121052,26.6708714232092,0.324621940274555,28.9221093456863,43.3645890163065,60.791799559933,15.038068625404,52.3111593406954,76.7610998995684,52.2661241624813,56.6375496128134,68.0140582616414,27.3444280234528,20.1308497103174,26.5290135321935,44.7438738470672,15.5907457381336,12.3087398947712,10.8182271390393,20.9835339838627,8.45922030527097,0,20.9506696358808,0,28.195176222202,0,0.23874448473769,2.07875276582847,0.307160702099232,0,4.78276015795743,0,17.3044067938098,0,2.19172787076177,26.7995398065213,0,0.102268682502155,86.2824486282097,0,0.898683511473268,0,23.0207566602092,3.55116260292961,43.1069566224492,0,0,0.927680981618513,0,1.30213880542617,0,2.17499872630438,1.0241410345695,7.11910220819746,0,2.06846023944879,0.291604613383254,0,0,2.17073589525734,0,0.774054819518572,0.2955476189535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| |||
|short_description=p2@LCP1 | |||
}} |
Revision as of 17:39, 11 January 2014
Short description: | p2@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LCP1_5end |
Coexpression cluster: | C2037_migratory_Neutrophils_Eosinophils_immature_lymphoma_CD14_splenic |
Association with transcript: | -12bp_to_ENST00000460190_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.23e-46 | 98 |
blood island | 2.23e-46 | 98 |
hemolymphoid system | 2.39e-40 | 108 |
bone marrow | 9.66e-33 | 76 |
immune system | 2.05e-31 | 93 |
bone element | 4.97e-28 | 82 |
skeletal element | 1.41e-23 | 90 |
skeletal system | 8.39e-19 | 100 |
connective tissue | 1.77e-12 | 371 |
blood | 7.96e-10 | 15 |
haemolymphatic fluid | 7.96e-10 | 15 |
organism substance | 7.96e-10 | 15 |
lateral plate mesoderm | 5.75e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.37e-19 | 51 |
immune system cancer | 1.37e-19 | 51 |
leukemia | 3.79e-15 | 39 |
myeloid leukemia | 8.20e-11 | 31 |
lymphoma | 1.26e-07 | 10 |