FFCP PHASE1:Hg19::chr13:53030077..53030083,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:53030077..53030083,- | |||
|id=chr13:53030077..53030083,- | |||
|ontology_enrichment_celltype=CL:0000064!6.58e-08!3;CL:0005012!6.58e-08!3;CL:0000067!6.58e-08!3;CL:0002304!6.58e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.55e-98;1!CL:0002625;1.55e-98;1!CL:0000216;1.55e-98;1!CL:0000154;8.34e-18;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.55e-98,1;CL:0002625,2.55e-98,1;CL:0000216,2.55e-98,1;CL:0000154,9.07e-18,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.87e-11;10!UBERON:0005564;2.87e-11;10 | |||
|ontology_enrichment_disease=DOID:154!7.64e-07!2;DOID:4236!7.64e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!6.58e-08!3;UBERON:0001775!6.58e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.55e-98;1!UBERON:0001343;1.55e-98;1!UBERON:0004910;1.55e-98;1!UBERON:0004813;1.55e-98;1!UBERON:0004909;3.52e-50;2!UBERON:0000473;3.99e-50;8!UBERON:0003135;6.80e-37;11!UBERON:0005904;6.30e-26;4!UBERON:0000991;4.86e-20;21!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0000058;2.87e-11;10!UBERON:0003133;8.24e-08;44!UBERON:0002323;3.42e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.55e-98,1;UBERON:0001343,2.55e-98,1;UBERON:0004910,2.55e-98,1;UBERON:0005154,2.55e-98,1;UBERON:0005295,2.55e-98,1;UBERON:0004813,2.55e-98,1;UBERON:0005297,2.55e-98,1;UBERON:0005294,2.55e-98,1;UBERON:0010141,2.55e-98,1;UBERON:0005891,2.55e-98,1;UBERON:0000473,3.99e-50,8;UBERON:0004909,4.52e-50,2;UBERON:0003135,6.80e-37,11;UBERON:0005904,7.14e-26,4;UBERON:0000991,4.86e-20,21;UBERON:0009196,4.86e-20,21;UBERON:0009117,4.86e-20,21;UBERON:0005564,4.86e-20,21;UBERON:0004176,3.41e-19,22;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0004871,1.07e-13,8;UBERON:0004876,2.37e-10,11;UBERON:0002323,7.07e-10,46;UBERON:0003133,1.62e-09,48;UBERON:0004458,2.38e-09,49;UBERON:0003886,1.34e-08,54;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59;UBERON:0004122,5.93e-08,15;UBERON:0002553,9.44e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,1.6068392984416,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.579684114443301,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0,0,0,0.127894371303652,0.215649622793364,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0.198950775161368,0,0.22589216407792,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.985123076837112,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:53030077..53030083,- | |||
}} |
Revision as of 17:54, 11 January 2014
Short description: | p@chr13:53030077..53030083, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:53030077..53030083, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.55e-98 | 1 |
seminiferous tubule epithelial cell | 2.55e-98 | 1 |
Sertoli cell | 2.55e-98 | 1 |
protein secreting cell | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.55e-98 | 1 |
seminiferous tubule of testis | 2.55e-98 | 1 |
epithelium of male gonad | 2.55e-98 | 1 |
epithelial cord | 2.55e-98 | 1 |
sex cord | 2.55e-98 | 1 |
seminiferous tubule epithelium | 2.55e-98 | 1 |
testis sex cord | 2.55e-98 | 1 |
genital ridge | 2.55e-98 | 1 |
primitive sex cord of indifferent gonad | 2.55e-98 | 1 |
coelomic epithelium | 2.55e-98 | 1 |
testis | 3.99e-50 | 8 |
epithelium of gonad | 4.52e-50 | 2 |
male reproductive organ | 6.80e-37 | 11 |
duct of male reproductive system | 7.14e-26 | 4 |
gonad | 4.86e-20 | 21 |
indifferent external genitalia | 4.86e-20 | 21 |
indifferent gonad | 4.86e-20 | 21 |
gonad primordium | 4.86e-20 | 21 |
external genitalia | 3.41e-19 | 22 |
male organism | 3.41e-19 | 22 |
male reproductive system | 3.41e-19 | 22 |
somatic layer of lateral plate mesoderm | 1.07e-13 | 8 |
urogenital ridge | 2.37e-10 | 11 |
body cavity | 7.07e-10 | 46 |
reproductive organ | 1.62e-09 | 48 |
body cavity or lining | 2.38e-09 | 49 |
body cavity precursor | 1.34e-08 | 54 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
genitourinary system | 5.93e-08 | 15 |
anatomical cavity | 9.44e-08 | 61 |