FFCP PHASE1:Hg19::chr14:38064590..38064606,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3169 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |||
|TSSclassifier=strong | |||
|UniProt=P55317 | |||
|association_with_transcript=-101bp_to_NM_004496,uc001wuf.2_5end | |||
|coexpression_cluster_id=C885 | |||
|description=CAGE_peak_2_at_FOXA1_5end | |||
|id=chr14:38064590..38064606,- | |||
|ontology_enrichment_celltype=CL:0000066!2.03e-26!254;CL:0000223!3.41e-09!59;CL:0000181!5.77e-07!12;CL:0000417!5.77e-07!12;CL:0000668!5.77e-07!12;CL:0000414!5.77e-07!12;CL:0000412!5.77e-07!12;CL:0000182!5.77e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.71e-15;12!CL:0002231;4.01e-09;3!CL:0000082;1.56e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.18e-15,12;CL:0000066,1.33e-13,253;CL:0000223,8.77e-12,58;CL:0002231,3.70e-09,3;CL:0000082,1.54e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.38e-27;30!UBERON:0009497;1.51e-13;13!UBERON:0004161;1.69e-12;11!UBERON:0008947;9.70e-12;29!UBERON:0009847;8.09e-10;3!UBERON:0003353;8.09e-10;3!UBERON:0006595;4.72e-09;86!UBERON:0003104;1.50e-07;31!CL:0000223;4.58e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.20e-46!106;DOID:0050687!3.42e-36!143;DOID:162!6.42e-22!235;DOID:14566!7.02e-21!239;DOID:299!1.25e-14!25;DOID:7!1.37e-08!39;DOID:0050615!6.62e-08!16;DOID:1324!2.96e-07!15;DOID:5093!5.45e-07!4;DOID:1612!5.45e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.77e-13;4!DOID:1612;2.77e-13;4!DOID:305;8.38e-10;106!DOID:1324;9.50e-09;15!DOID:7;1.26e-08;39!DOID:0050615;3.92e-08;16!DOID:3905;6.21e-08;9!DOID:3119;4.50e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.43e-24,106;DOID:0050687,8.30e-16,143;DOID:5093,2.66e-13,4;DOID:1612,2.66e-13,4;DOID:7,3.70e-10,39;DOID:1324,9.58e-09,15;DOID:162,1.03e-08,235;DOID:14566,2.41e-08,239;DOID:0050615,3.95e-08,16;DOID:3905,6.27e-08,9;DOID:3119,4.38e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004921!7.22e-30!129;UBERON:0004185!7.22e-30!129;UBERON:0001007!1.10e-25!155;UBERON:0001555!1.10e-25!155;UBERON:0007026!1.10e-25!155;UBERON:0004119!4.80e-24!169;UBERON:0000925!4.80e-24!169;UBERON:0006595!4.80e-24!169;UBERON:0000077!8.22e-24!130;UBERON:0001041!9.51e-18!98;UBERON:0005911!2.19e-17!82;UBERON:0005177!5.44e-17!107;UBERON:0009569!5.86e-17!113;UBERON:0000466!5.97e-15!126;UBERON:0008947!3.53e-14!38;UBERON:0003258!3.53e-14!38;UBERON:0000065!2.09e-12!53;UBERON:0003104!2.74e-12!238;UBERON:0009142!2.74e-12!238;UBERON:0005172!2.39e-11!55;UBERON:0005173!2.39e-11!55;UBERON:0005153!3.41e-11!37;UBERON:0000072!8.70e-11!46;UBERON:0009497!1.06e-10!25;UBERON:0000015!1.06e-10!25;UBERON:0002423!1.06e-10!25;UBERON:0006235!1.06e-10!25;UBERON:0004161!1.06e-10!25;UBERON:0001004!1.40e-10!72;UBERON:0009856!2.94e-10!26;UBERON:0002417!3.99e-10!61;UBERON:0000916!3.99e-10!61;UBERON:0003064!1.27e-09!37;UBERON:0007499!1.52e-09!25;UBERON:0001008!1.82e-09!45;UBERON:0003929!2.36e-09!54;UBERON:0001046!3.88e-09!19;UBERON:0009854!4.46e-09!23;UBERON:0002048!4.78e-09!22;UBERON:0000117!4.78e-09!22;UBERON:0000171!4.78e-09!22;UBERON:0000170!4.78e-09!22;UBERON:0005597!4.78e-09!22;UBERON:0000118!4.78e-09!22;UBERON:0000464!5.00e-09!104;UBERON:0002100!6.84e-09!216;UBERON:0006554!7.46e-09!44;UBERON:0008835!2.28e-08!22;UBERON:0003894!2.28e-08!22;UBERON:0005178!5.30e-08!34;UBERON:0002224!5.30e-08!34;UBERON:0005157!6.86e-08!51;UBERON:0005181!1.25e-07!35;UBERON:0000915!1.37e-07!52;UBERON:0001737!6.09e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.10e-17;25!UBERON:0002107;5.62e-14;19!UBERON:0006925;5.62e-14;19!UBERON:0002048;1.33e-13;22!UBERON:0000117;1.33e-13;22!UBERON:0000171;1.33e-13;22!UBERON:0000170;1.33e-13;22!UBERON:0002365;5.57e-11;31!UBERON:0002330;5.57e-11;31!UBERON:0005178;1.12e-09;34!UBERON:0002224;1.12e-09;34!UBERON:0000915;3.04e-09;52!UBERON:0002367;4.68e-09;11!UBERON:0010147;4.68e-09;11!UBERON:0000160;9.48e-09;17!UBERON:0005181;1.17e-08;35!UBERON:0004802;1.56e-08;19!UBERON:0000115;1.56e-08;19!UBERON:0005409;2.67e-08;22!UBERON:0003937;3.07e-08;12!UBERON:0005399;3.07e-08;12!UBERON:0009569;6.26e-08;110!UBERON:0002530;8.93e-08;57!UBERON:0000310;1.06e-07;10!UBERON:0004921;2.31e-07;33!UBERON:0004807;3.52e-07;22!UBERON:0001443;5.90e-07;11!UBERON:0005172;8.12e-07;52!UBERON:0005173;8.12e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.23e-30,118;UBERON:0005911,1.73e-28,82;UBERON:0001007,1.82e-24,145;UBERON:0001555,1.82e-24,145;UBERON:0007026,1.82e-24,145;UBERON:0004119,3.66e-21,160;UBERON:0000925,3.66e-21,160;UBERON:0006595,3.66e-21,160;UBERON:0005153,5.35e-21,37;UBERON:0007499,5.48e-20,25;UBERON:0009569,7.48e-20,112;UBERON:0009856,4.42e-19,26;UBERON:0003929,5.17e-19,54;UBERON:0009497,2.00e-17,25;UBERON:0000015,2.00e-17,25;UBERON:0002423,2.00e-17,25;UBERON:0006235,2.00e-17,25;UBERON:0004161,2.00e-17,25;UBERON:0001041,2.78e-17,87;UBERON:0008835,4.41e-17,22;UBERON:0003894,4.41e-17,22;UBERON:0009854,3.27e-16,23;UBERON:0005157,1.61e-15,47;UBERON:0002100,3.24e-15,199;UBERON:0005177,4.16e-15,101;UBERON:0002107,5.72e-14,19;UBERON:0006925,5.72e-14,19;UBERON:0008836,5.72e-14,19;UBERON:0000915,8.09e-14,52;UBERON:0002048,1.33e-13,22;UBERON:0000117,1.33e-13,22;UBERON:0000171,1.33e-13,22;UBERON:0000170,1.33e-13,22;UBERON:0005597,1.33e-13,22;UBERON:0000118,1.33e-13,22;UBERON:0002530,9.61e-12,59;UBERON:0005178,2.29e-11,34;UBERON:0002224,2.29e-11,34;UBERON:0002365,2.54e-11,31;UBERON:0002330,2.54e-11,31;UBERON:0011216,4.71e-11,223;UBERON:0005181,5.91e-11,35;UBERON:0008947,7.44e-10,38;UBERON:0003258,7.44e-10,38;UBERON:0002367,4.72e-09,11;UBERON:0010147,4.72e-09,11;UBERON:0009846,4.72e-09,11;UBERON:0003353,4.72e-09,11;UBERON:0004902,4.72e-09,11;UBERON:0003820,4.72e-09,11;UBERON:0009847,4.72e-09,11;UBERON:0000160,6.91e-09,17;UBERON:0005172,1.29e-08,54;UBERON:0005173,1.29e-08,54;UBERON:0001046,1.35e-08,19;UBERON:0004802,1.54e-08,19;UBERON:0000115,1.54e-08,19;UBERON:0003937,3.10e-08,12;UBERON:0005399,3.10e-08,12;UBERON:0000310,1.02e-07,10;UBERON:0002417,2.07e-07,60;UBERON:0000916,2.07e-07,60;UBERON:0005409,2.84e-07,25;UBERON:0001443,5.68e-07,11;UBERON:0000162,5.94e-07,14;UBERON:0001353,5.94e-07,14;UBERON:0000163,5.94e-07,14;UBERON:0006866,5.94e-07,14;UBERON:0000164,5.94e-07,14;UBERON:0000931,5.94e-07,14;UBERON:0003127,8.96e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.47440361900905,4.18680700783456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0,0,0,1.25849830862972,0.825354125820202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0.723033089650446,0.882351781859152,0,0.474541238222193,0.808987848960987,0.196221465125346,0.38474715694639,0,0,0,0,8.87285243752816,7.86261773342101,4.72631925345123,0,34.1907859149856,0,0,0,0,0,0,0,0,0,0,0,0,0,16.5942923571448,15.4527509177077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.7099383597485,1.20303882181971,1.84161977871793,0,0,0,0.451199612907412,0.770153371044148,0.784349769176855,0,0.844413031143006,0,0,0,0,0,1.00337954770971,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0,0,3.60643540767028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,2.54188262097304,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0.561421621224659,0,0.728163130497081,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0.552567831062295,1.0077309914171,0,0,0,0.359473404589307,4.65455054156584,0,0.690503839458535,0,0,0,0,0,5.98983850496036,36.4708199984136,3.62499787717397,1.70690172428249,2.79679015322043,0,0,0.291604613383254,2.77799991893268,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,11.0255395718474,0.216388639742091,2.98578579323551,0.796118080530053,1.83309043480088,1.18608451472249,0.247127877893006,0.104421949505455,0,0,0,0,0.782658475728359,0,0,0,0,0,1.35291077473043,2.79958116772567,0,0,0,0,0.569219092059585,0,1.21491816834592,0.587954384486266,0.174118413160805,0,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0.0882561266915003,0,0,0,0,6.06209286477889,0.64127056201227,0.213452994739353,0,0.144090417154106,2.97795150031381,2.23073497220554,0.14405479798815,3.10631338913581,0.471388069233591,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,1.16495949527454,8.42980050687293,9.14816028030948,8.62765361333567,2.85439696392771,0,0,0,0,0,0,0.449947783103001,0,0,1.34173875039706,0,0.104909176269996,8.55362725807193,4.30289614398828,0,0,0,0,0,0,0,0,0,0,0.226624183040251,6.88795498286987,3.97520666736664,0,0,0.342173675768659,3.52407511158336,1.49502377594773,5.03053776318931,2.48543433208317,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,1.04397716786085,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0.539124056983409,0.314531883711793,0,0,0.425149840203366,0,0.558644917973244,0,0,9.60684897942564,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.707818340086442,0,0.231051332300676,0,0,0,0.150420656698515,0,0,0,0,2.95712172434091,0,0,0,0,0,0,1.98484471355718,0,5.23825953322341,0,0,0,0.227662191351298,0,0,0,0,0,2.2456829767954,5.45033869271139,12.1664293918297,0,0,1.82631744101899,0.431855182437243,0,0,0.316027223465453,0,0,0,0,0,0,1.72090943528111,0,0,0,2.06196181689645,0,0,0.782988022584546,0,0.731507549893617,0,0,0,0.971421986118279,2.80727356154527,19.8950775161368,0,0.33883824611688,1.42922671769058,4.37792246343353,0.154348316215889,1.31135736302374,3.29222107453066,0,0.942706188406504,0,0,0.4226557275834,0,0,0.0644578879735772,0,4.10674058793012,0,0.722172300202514,0,0.458729283404541,0,0.157771562193185,0,0,1.5870805215462,0,0,0,0,0,1.39368351112581,0,0,0,0,0.0757786982182394,0,0,0,1.27940389140589,0.714193294391221,0,0,0,0,0,0.435433495793923,0.342233301085281,0.606168477131288,4.73366555591664,1.99596213927608,0.814032686109745,0,0,0.0898252021065869,0,0,0,0.665756774185513,0,0 | |||
|short_description=p2@FOXA1 | |||
}} |
Revision as of 19:50, 11 January 2014
Short description: | p2@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXA1_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -101bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.18e-15 | 12 |
epithelial cell | 1.33e-13 | 253 |
endodermal cell | 8.77e-12 | 58 |
epithelial cell of prostate | 3.70e-09 | 3 |
epithelial cell of lung | 1.54e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.43e-24 | 106 |
cell type cancer | 8.30e-16 | 143 |
thoracic cancer | 2.66e-13 | 4 |
breast cancer | 2.66e-13 | 4 |
disease of anatomical entity | 3.70e-10 | 39 |
lung cancer | 9.58e-09 | 15 |
cancer | 1.03e-08 | 235 |
disease of cellular proliferation | 2.41e-08 | 239 |
respiratory system cancer | 3.95e-08 | 16 |
lung carcinoma | 6.27e-08 | 9 |
gastrointestinal system cancer | 4.38e-07 | 14 |