FFCP PHASE1:Hg19::chr14:64565121..64565132,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17084 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-30bp_to_ENST00000555323_5end | |||
|description=CAGE_peak_10_at_SYNE2_5end | |||
|id=chr14:64565121..64565132,+ | |||
|ontology_enrichment_celltype=CL:0002537!2.58e-10!5;CL:0002541!5.04e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.56e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.62e-15,5 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.43e-08;10!UBERON:0007687;3.43e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!3.42e-12!11;UBERON:0001155!6.52e-10!9;UBERON:0005631!2.20e-09!14;UBERON:0000158!2.20e-09!14;UBERON:0000476!5.04e-08!3;UBERON:0000920!5.04e-08!3;UBERON:0002048!5.18e-08!22;UBERON:0000117!5.18e-08!22;UBERON:0000171!5.18e-08!22;UBERON:0000170!5.18e-08!22;UBERON:0005597!5.18e-08!22;UBERON:0000118!5.18e-08!22;UBERON:0000305!1.74e-07!7;UBERON:0002171!7.77e-07!1;UBERON:0006518!7.77e-07!1;UBERON:0008949!7.77e-07!1;UBERON:0000101!7.77e-07!1;UBERON:0002167!7.77e-07!1;UBERON:0001007!7.89e-07!155;UBERON:0001555!7.89e-07!155;UBERON:0007026!7.89e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.06e-19;1!UBERON:0006518;2.06e-19;1!UBERON:0008949;2.06e-19;1!UBERON:0000101;2.06e-19;1!UBERON:0002167;2.06e-19;1!UBERON:0001155;9.78e-19;9!UBERON:0000059;1.85e-15;11!UBERON:0000305;2.24e-11;7!UBERON:0000160;1.07e-09;17!UBERON:0005631;3.08e-08;10!UBERON:0000158;3.08e-08;10!UBERON:0002048;5.45e-08;22!UBERON:0000117;5.45e-08;22!UBERON:0000171;5.45e-08;22!UBERON:0000170;5.45e-08;22!UBERON:0005409;1.04e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.71e-19,1;UBERON:0006518,2.71e-19,1;UBERON:0008949,2.71e-19,1;UBERON:0000101,2.71e-19,1;UBERON:0002167,2.71e-19,1;UBERON:0001155,9.79e-19,9;UBERON:0000059,1.85e-15,11;UBERON:0000305,2.30e-11,7;UBERON:0004871,4.62e-10,8;UBERON:0000160,1.07e-09,17;UBERON:0002048,5.52e-08,22;UBERON:0000117,5.52e-08,22;UBERON:0000171,5.52e-08,22;UBERON:0000170,5.52e-08,22;UBERON:0005597,5.52e-08,22;UBERON:0000118,5.52e-08,22;UBERON:0005409,6.97e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,3.58116727106535,0.296964680832639,2.76444631889309,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.14994833854341,6.11030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51639951094387,1.20645552710496,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28144895081234,2.82967749179399,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0,0.190941474834495,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@SYNE2 | |||
}} |
Revision as of 20:32, 11 January 2014
Short description: | p10@SYNE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYNE2_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000555323_5end |
EntrezGene: | SYNE2 |
HGNC: | 17084 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.62e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.71e-19 | 1 |
right lung lobe | 2.71e-19 | 1 |
lower lobe of lung | 2.71e-19 | 1 |
lobe of lung | 2.71e-19 | 1 |
right lung | 2.71e-19 | 1 |
colon | 9.79e-19 | 9 |
large intestine | 1.85e-15 | 11 |
amnion | 2.30e-11 | 7 |
somatic layer of lateral plate mesoderm | 4.62e-10 | 8 |
intestine | 1.07e-09 | 17 |
lung | 5.52e-08 | 22 |
respiratory tube | 5.52e-08 | 22 |
respiration organ | 5.52e-08 | 22 |
pair of lungs | 5.52e-08 | 22 |
lung primordium | 5.52e-08 | 22 |
lung bud | 5.52e-08 | 22 |
gastrointestinal system | 6.97e-07 | 25 |