FFCP PHASE1:Hg19::chr14:81421324..81421348,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12373 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000557096_5end | |||
|coexpression_cluster_id=C1733 | |||
|description=CAGE_peak_2_at_TSHR_5end | |||
|id=chr14:81421324..81421348,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.32e-07!25;CL:0000827!2.32e-07!25;CL:0000542!8.91e-07!53;CL:0000051!8.91e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.02e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.15e-07,25;CL:0000827,2.15e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.59e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;6.59e-07;1!DOID:0060061;6.59e-07;1!DOID:8691;6.59e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,6.60e-07,1;DOID:0060061,6.60e-07,1;DOID:8691,6.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-15!115;UBERON:0001049!2.29e-13!57;UBERON:0005068!2.29e-13!57;UBERON:0006241!2.29e-13!57;UBERON:0007135!2.29e-13!57;UBERON:0002616!1.35e-10!59;UBERON:0003076!1.00e-09!15;UBERON:0003057!1.00e-09!15;UBERON:0000955!3.27e-09!69;UBERON:0006238!3.27e-09!69;UBERON:0004733!8.67e-09!12;UBERON:0002028!8.67e-09!12;UBERON:0007277!8.67e-09!12;UBERON:0000073!3.10e-08!94;UBERON:0001016!3.10e-08!94;UBERON:0004732!6.33e-08!13;UBERON:0001017!7.96e-08!82;UBERON:0005743!8.99e-08!86;UBERON:0002308!9.72e-08!9;UBERON:0000125!9.72e-08!9;UBERON:0003075!2.83e-07!86;UBERON:0007284!2.83e-07!86;UBERON:0002780!5.90e-07!41;UBERON:0001890!5.90e-07!41;UBERON:0006240!5.90e-07!41;UBERON:0002298!7.94e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.86e-13;2!UBERON:0005058;8.86e-13;2!UBERON:0009113;8.86e-13;2!UBERON:0000341;2.08e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,2.02e-12,2;UBERON:0000974,1.94e-09,10;UBERON:0009722,1.14e-08,11;UBERON:0007690,1.14e-08,11;UBERON:0007029,7.82e-07,1;UBERON:0002370,8.52e-07,4;UBERON:0005058,8.52e-07,4;UBERON:0009113,8.52e-07,4;UBERON:0003295,8.52e-07,4;UBERON:0005562,8.52e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,1.17903228824749,0.205601498999509,0.668745981562712,0.651844533267181,1.4203434172042,1.94826728407911,1.00269411196656,9.13278313171995,6.86755073209225,10.0197429593056,2.17755243533648,1.43065282315866,0.328875809207352,0.276350017785848,0,0,0,0,0.226618685395132,0,1.71813722741315,1.01207876807801,0,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0999870760007,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0,0,0,0,0,0,0.106727557803444,0.303127571446259,0,1.81434175997808,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.773365746336976,0.154048617114644,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0.557409525377156,0.144269212976445,4.97992903438899,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0.95497793895076,0.890894042497916,0.921482106297696,0,0.140669416410513,0.333926115068718,0,0,0.19924798825107,1.10513566212459,0.251932747854276,0,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0.482385754501632,0,0.552896299656123,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,4.08773192782946,0,0,0,0,0,0.189753732724185,0,0,0,0,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0.741383633679017,1.25306339406546,0,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,1.72022758707021,0.776503360757966,0.372578417648301,0.415045904808692,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0,2.19986135440423,0.426766918776564,1.54993481694734,0,0,0,0,1.15104934173287,0.323474434190045,0,1.74735421107222,0,0,0,0,0,1.02520268501629,0,0,0,0.385375350578757,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0,0,0,0.19024743058172,0.546974809018219,0,0.496211178389294,0,0,1.60710550763486,0.672567444437648,0,0.455324382702595,0.266107110487916,0.460935950223117,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0.785577949580009,0,0,0,0,0.643288897589907,0,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,1.94284397223656,0,0.994753875806841,0,0.11294608203896,0.549702583727146,0,0,0,0,0,0,0.196308467114945,0,1.2679671827502,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0.315543124386369,0.0679914901909147,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,3.62497769231668,10.7128994158683,16.7285276475256,18.1258165743905,0,14.1296691377526,11.9249141485349,0.217716747896961,0.342233301085281,1.01028079521881,0.215166616178029,0.332660356546013,0,0.213454691755431,0,0,2.34640942403454,0,0,0,4.83057104618463,0 | |||
|short_description=p2@TSHR | |||
}} |
Revision as of 21:17, 11 January 2014
Short description: | p2@TSHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSHR_5end |
Coexpression cluster: | C1733_thymus_thyroid_throat_Hodgkin_CD4_vein_chronic |
Association with transcript: | 0bp_to_ENST00000557096_5end |
EntrezGene: | TSHR |
HGNC: | 12373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.15e-07 | 25 |
pro-T cell | 2.15e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
throat | 2.02e-12 | 2 |
neck | 1.94e-09 | 10 |
entire pharyngeal arch endoderm | 1.14e-08 | 11 |
early pharyngeal endoderm | 1.14e-08 | 11 |
surface | 7.82e-07 | 1 |
thymus | 8.52e-07 | 4 |
hemolymphoid system gland | 8.52e-07 | 4 |
thymic region | 8.52e-07 | 4 |
pharyngeal gland | 8.52e-07 | 4 |
thymus primordium | 8.52e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 6.60e-07 | 1 |
cutaneous T cell lymphoma | 6.60e-07 | 1 |
mycosis fungoides | 6.60e-07 | 1 |