FFCP PHASE1:Hg19::chr14:89960518..89960534,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1112 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1928 | |||
|TSSclassifier=strong | |||
|UniProt=G3V4N5 | |||
|association_with_transcript=0bp_to_ENST00000553904_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_23_at_FOXN3_5end | |||
|id=chr14:89960518..89960534,- | |||
|ontology_enrichment_celltype=CL:0000764!1.50e-07!2;CL:0000765!1.50e-07!2;CL:0000050!1.50e-07!2;CL:0000038!1.50e-07!2;CL:0000558!1.50e-07!2;CL:0000547!1.50e-07!2;CL:0000549!1.50e-07!2;CL:0000550!1.50e-07!2;CL:0000552!1.50e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.28e-13;13!CL:0000945;2.30e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.95e-12,14;CL:0000945,2.15e-07,24;CL:0000826,2.15e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.88e-55;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-53!57;UBERON:0005068!1.48e-53!57;UBERON:0006241!1.48e-53!57;UBERON:0007135!1.48e-53!57;UBERON:0002616!3.20e-48!59;UBERON:0007023!1.01e-47!115;UBERON:0000955!3.12e-42!69;UBERON:0006238!3.12e-42!69;UBERON:0002780!1.28e-38!41;UBERON:0001890!1.28e-38!41;UBERON:0006240!1.28e-38!41;UBERON:0002619!1.12e-37!22;UBERON:0003080!1.42e-37!42;UBERON:0003075!2.45e-37!86;UBERON:0007284!2.45e-37!86;UBERON:0001950!5.47e-37!20;UBERON:0001017!1.07e-36!82;UBERON:0002020!3.29e-36!34;UBERON:0003528!3.29e-36!34;UBERON:0001893!5.11e-36!34;UBERON:0002346!2.68e-35!90;UBERON:0001869!6.63e-35!32;UBERON:0005743!1.26e-34!86;UBERON:0002791!8.70e-34!33;UBERON:0000956!8.10e-33!25;UBERON:0000203!8.10e-33!25;UBERON:0000073!1.35e-30!94;UBERON:0001016!1.35e-30!94;UBERON:0003056!2.73e-26!61;UBERON:0000033!6.86e-25!123;UBERON:0000153!2.47e-23!129;UBERON:0007811!2.47e-23!129;UBERON:0000200!4.39e-19!6;UBERON:0000178!4.40e-17!15;UBERON:0000179!4.40e-17!15;UBERON:0000463!4.40e-17!15;UBERON:0004733!5.36e-17!12;UBERON:0002028!5.36e-17!12;UBERON:0007277!5.36e-17!12;UBERON:0004121!8.52e-17!169;UBERON:0003076!1.17e-16!15;UBERON:0003057!1.17e-16!15;UBERON:0000924!3.30e-16!173;UBERON:0006601!3.30e-16!173;UBERON:0004732!1.40e-15!13;UBERON:0002680!2.54e-13!9;UBERON:0001895!2.54e-13!9;UBERON:0010092!2.54e-13!9;UBERON:0001872!4.32e-11!5;UBERON:0000025!5.99e-11!194;UBERON:0002021!1.07e-10!5;UBERON:0002771!2.11e-10!3;UBERON:0001871!2.99e-10!7;UBERON:0000988!3.54e-10!3;UBERON:0002298!6.31e-10!8;UBERON:0004111!5.67e-08!241;UBERON:0001870!6.50e-08!2;UBERON:0000477!8.37e-08!286;UBERON:0000064!2.30e-07!219;UBERON:0002148!3.30e-07!2;UBERON:0009662!3.30e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.49e-28;6!UBERON:0002680;5.67e-19;9!UBERON:0001895;5.67e-19;9!UBERON:0004733;2.10e-14;12!UBERON:0002028;2.10e-14;12!UBERON:0004732;2.39e-13;13!UBERON:0000178;1.96e-11;15!UBERON:0000179;1.96e-11;15!UBERON:0000463;1.96e-11;15!UBERON:0002114;2.88e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.10e-28,6;UBERON:0006215,4.10e-28,6;UBERON:0002680,5.33e-19,9;UBERON:0001895,5.33e-19,9;UBERON:0010092,5.33e-19,9;UBERON:0004733,2.00e-14,12;UBERON:0002028,2.00e-14,12;UBERON:0007277,2.00e-14,12;UBERON:0004732,2.29e-13,13;UBERON:0003076,1.14e-11,15;UBERON:0003057,1.14e-11,15;UBERON:0000178,2.34e-11,15;UBERON:0000179,2.34e-11,15;UBERON:0000463,2.34e-11,15;UBERON:0002114,2.63e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,2.84606484554724,1.76171156811282,1.14681968437569,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,0.822724546172388,0.648473311192717,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,6.10326945268333,5.75012151642368,2.95547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0.41023272848151,0.252071696221718,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.253663240775627,1.09394961803644,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0.339848664884159,0.328863867814245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0.339957450954573,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@FOXN3 | |||
}} |
Revision as of 21:25, 11 January 2014
Short description: | p23@FOXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_FOXN3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 0bp_to_ENST00000553904_5end |
EntrezGene: | FOXN3 |
HGNC: | 1928 |
UniProt: | G3V4N5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.95e-12 | 14 |
lymphocyte of B lineage | 2.15e-07 | 24 |
pro-B cell | 2.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.10e-28 | 6 |
rhombic lip | 4.10e-28 | 6 |
regional part of metencephalon | 5.33e-19 | 9 |
metencephalon | 5.33e-19 | 9 |
future metencephalon | 5.33e-19 | 9 |
segmental subdivision of hindbrain | 2.00e-14 | 12 |
hindbrain | 2.00e-14 | 12 |
presumptive hindbrain | 2.00e-14 | 12 |
segmental subdivision of nervous system | 2.29e-13 | 13 |
posterior neural tube | 1.14e-11 | 15 |
chordal neural plate | 1.14e-11 | 15 |
blood | 2.34e-11 | 15 |
haemolymphatic fluid | 2.34e-11 | 15 |
organism substance | 2.34e-11 | 15 |
duodenum | 2.63e-07 | 2 |