FFCP PHASE1:Hg19::chr14:100705140..100705188,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7528 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12856 | |||
|TSSclassifier=strong | |||
|UniProt=P25490 | |||
|association_with_transcript=38bp_to_NM_003403,uc001ygy.1_5end | |||
|description=CAGE_peak_2_at_YY1_5end | |||
|id=chr14:100705140..100705188,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.81e-07!143;DOID:305!7.40e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.81e-07,143;DOID:305,7.40e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-26!115;UBERON:0001049!3.64e-10!57;UBERON:0005068!3.64e-10!57;UBERON:0006241!3.64e-10!57;UBERON:0007135!3.64e-10!57;UBERON:0003075!6.61e-09!86;UBERON:0007284!6.61e-09!86;UBERON:0002346!7.25e-09!90;UBERON:0002780!2.28e-08!41;UBERON:0001890!2.28e-08!41;UBERON:0006240!2.28e-08!41;UBERON:0005743!2.71e-08!86;UBERON:0000073!2.86e-08!94;UBERON:0001016!2.86e-08!94;UBERON:0002616!3.56e-08!59;UBERON:0001017!4.31e-08!82;UBERON:0003080!8.07e-08!42;UBERON:0000955!1.82e-07!69;UBERON:0006238!1.82e-07!69;UBERON:0001893!8.58e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.54e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.85e-26,114;UBERON:0001049,1.03e-10,56;UBERON:0005068,1.03e-10,56;UBERON:0006241,1.03e-10,56;UBERON:0007135,1.03e-10,56;UBERON:0000073,2.22e-10,53;UBERON:0002616,2.22e-10,53;UBERON:0003075,5.22e-09,82;UBERON:0007284,5.22e-09,82;UBERON:0002346,5.90e-09,86;UBERON:0001017,1.83e-08,81;UBERON:0001016,2.07e-08,89;UBERON:0002780,2.28e-08,41;UBERON:0001890,2.28e-08,41;UBERON:0003080,2.28e-08,41;UBERON:0006240,2.28e-08,41;UBERON:0000955,7.43e-08,68;UBERON:0006238,7.43e-08,68;UBERON:0011216,7.73e-08,223;UBERON:0001893,8.58e-07,34 | |||
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| |||
|short_description=p2@YY1 | |||
}} |
Revision as of 21:54, 11 January 2014
Short description: | p2@YY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YY1_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_NM_003403, uc001ygy.1_5end |
EntrezGene: | YY1 |
HGNC: | 12856 |
UniProt: | P25490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.85e-26 | 114 |
neural tube | 1.03e-10 | 56 |
neural rod | 1.03e-10 | 56 |
future spinal cord | 1.03e-10 | 56 |
neural keel | 1.03e-10 | 56 |
regional part of nervous system | 2.22e-10 | 53 |
regional part of brain | 2.22e-10 | 53 |
neural plate | 5.22e-09 | 82 |
presumptive neural plate | 5.22e-09 | 82 |
neurectoderm | 5.90e-09 | 86 |
central nervous system | 1.83e-08 | 81 |
nervous system | 2.07e-08 | 89 |
regional part of forebrain | 2.28e-08 | 41 |
forebrain | 2.28e-08 | 41 |
anterior neural tube | 2.28e-08 | 41 |
future forebrain | 2.28e-08 | 41 |
brain | 7.43e-08 | 68 |
future brain | 7.43e-08 | 68 |
organ system subdivision | 7.73e-08 | 223 |
telencephalon | 8.58e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.81e-07 | 143 |
carcinoma | 7.40e-07 | 106 |