FFCP PHASE1:Hg19::chr15:29561979..29562038,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56160 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7677 | |||
|TSSclassifier=strong | |||
|UniProt=Q96MG7 | |||
|association_with_transcript=0bp_to_ENST00000332303,NM_138704,uc001zco.2_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_1_at_NDNL2_5end | |||
|id=chr15:29561979..29562038,- | |||
|ontology_enrichment_celltype=CL:0000838!8.08e-16!52;CL:0000542!4.47e-15!53;CL:0000051!4.47e-15!53;CL:0000791!1.54e-11!18;CL:0000789!1.54e-11!18;CL:0002420!1.54e-11!18;CL:0002419!1.54e-11!18;CL:0000790!1.54e-11!18;CL:0000084!2.07e-08!25;CL:0000827!2.07e-08!25;CL:0000625!6.14e-08!11;CL:0000738!2.34e-07!140;CL:0000945!4.26e-07!24;CL:0000826!4.26e-07!24;CL:0000236!7.36e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-11;18!CL:0000789;1.59e-11;18!CL:0002419;1.59e-11;18!CL:0000542;1.30e-08;53!CL:0000084;2.01e-08;25!CL:0000625;6.20e-08;11!CL:0000945;5.04e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.08e-16,52;CL:0000542,4.47e-15,53;CL:0000051,4.47e-15,53;CL:0000791,1.54e-11,18;CL:0000789,1.54e-11,18;CL:0002420,1.54e-11,18;CL:0002419,1.54e-11,18;CL:0000790,1.54e-11,18;CL:0000084,2.07e-08,25;CL:0000827,2.07e-08,25;CL:0000738,3.32e-08,136;CL:0000625,6.14e-08,11;CL:0002031,1.55e-07,120;CL:0002087,2.63e-07,115;CL:0000945,4.26e-07,24;CL:0000826,4.26e-07,24;CL:0000236,7.36e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-11;18!CL:0000051;1.30e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=32.5204298894296,31.2586764880835,32.9833305584573,35.0256544235956,25.4767823823554,41.8722491568177,37.9949817252466,24.0053551902196,42.8344430247735,29.7338063166826,35.5878595665938,32.5477644473957,30.5969694745006,27.8474294160105,22.5350215494983,30.2546315903299,39.7778388495825,24.8305430731707,28.7880351286399,36.6900753068828,41.2081396313391,46.7047535002351,20.036519099174,22.3105312868801,24.2297294417969,53.8714510523056,43.4312118190213,45.4948315993066,54.2842702051488,45.2918689754711,42.8840661585531,17.4690032650996,25.301297177373,19.9667165490065,11.2327440841437,28.1495080325095,28.4792426154802,50.4135821764008,50.7377452099458,52.0826089718044,21.2719700527928,20.0814072931767,22.9242255194426,19.047169280123,23.4283085087062,22.5603176904669,19.2916100631718,31.2487594896588,18.5823822537062,26.4677000936378,29.9708026639048,22.4658118394156,25.8559260552464,28.4013260776883,12.1883837934908,18.6359916147179,24.5615535052061,16.6295378489363,26.3232147438976,30.1673285451528,23.0161365287655,18.8015241106428,26.7281301212987,24.7210355308963,27.2796684310869,43.6886623012178,29.272645702792,21.1048878815664,26.5956288394303,23.2392063834475,23.005181100068,33.881542510856,20.8865175710984,32.744569378351,36.7805438939525,38.7868494190495,31.3396880898721,29.7350247826183,22.1801309641971,40.4718096112573,39.9822521170171,42.7434119809243,65.1186104506894,49.698613624854,63.1551570243124,51.6343569305474,81.2803853683105,59.7742537552663,72.7149360063348,71.5540315901523,93.920139903059,65.7705652095451,68.426907834416,25.1125524300149,25.2228853341691,22.3876472058815,93.2404310339569,112.401078146261,110.819207960735,37.9513344536839,123.850461320764,149.136058806441,161.706184578566,43.004436357677,95.7469199293221,99.2471847734623,90.1776866337502,40.7330396727647,42.6594659996401,40.4517245325043,56.9281036638848,39.9928258314372,89.4167975867224,90.1612590662333,108.716944757176,29.9136664721575,93.5058004388688,104.462743426719,72.8696713016168,66.8987370080603,72.9213468319189,66.5316431113862,51.9484160818316,48.1229657940613,68.7118996037902,49.7232229292435,65.6902397536837,84.8764388976123,76.2204557982996,77.3362316734147,26.8187552945358,34.8764447045891,29.664114347699,20.6020316859203,34.5923158338764,41.1364113848739,40.5595832996061,49.1501219005662,28.1713755148922,25.7206101056574,29.5124879928903,36.3466934506153,34.6080523877915,25.2133421093412,24.9901493114106,21.7662171624084,25.2620124985844,28.3803842923357,32.0317150036872,19.6872475704669,20.2737655514039,36.1298529944572,29.5069426366455,28.2653970962005,26.847963917434,23.9352696487859,23.4074362521228,20.414923974377,15.6537155582153,19.0790749275862,22.5584417581122,22.0478910658369,29.7755710208767,18.7508170976393,29.1651101237433,14.7344551668732,19.5340554184768,18.8061172407148,22.9974956198825,22.7823758296351,27.8466650774219,2.63560834872127,7.75560528296651,31.3987717542625,30.8122610051097,25.9592548912389,11.9168262731897,25.2416226258956,25.5361235182817,38.6867544098192,28.8222288470203,33.7934541331509,22.7184055841829,23.1702355959863,22.5577426296573,38.4447866218126,31.1134999219199,44.2867506165876,24.0363259159347,27.953119255678,28.0963519437386,29.2411901622975,22.9859581002747,23.8766371393822,23.2735755230578,25.426703683536,31.6176890397842,45.144108576718,37.3373063210621,39.1369385633351,69.7059597561751,23.5670559535693,28.7772595705518,21.3339368922821,28.5335453572545,36.1655599042843,35.6064199608634,21.8924113498841,22.9618733681743,36.7318708767936,30.3062618658173,23.7071965906678,27.6180778359016,17.7771972631484,32.9426835706914,13.1645539148188,27.964420481264,18.6800992940645,35.6233107745698,27.3181836023792,23.7856426986132,30.6286378612026,41.5423451160695,23.5778240859222,25.0926430943568,21.2235400587863,31.8351372998244,28.0963108841549,33.6962434321603,36.0740471453489,25.9890476401897,29.5631660851422,15.6449532329816,34.0917697242229,27.6269842704961,37.1494342425583,44.7565278635143,26.8556436090446,27.9850585529649,24.5831250481152,25.2573197557182,26.5812921792736,24.4388737684429,20.494358840345,18.2485962566572,23.4695765737298,33.2169954581092,39.2676966649648,32.1027728838492,36.7521778463855,17.7457048750563,26.5363348502959,21.2684366405305,35.7585110525867,19.9241270439844,24.0194934417936,28.3155736354254,19.1082980537953,27.1428225511403,20.9249886058277,51.4777122390313,41.5973914111831,37.5261489265711,26.5480627392926,29.7043996416629,15.0141105671517,17.1304639653346,21.1182108980404,15.8040879591855,23.1791263765616,21.667096535691,14.9762729689112,25.5645599136613,32.8068418953719,24.5253907170335,23.6764412394785,21.5836039713864,27.0289562817985,26.0700221832344,38.9203957937795,30.376709734563,45.1975291878883,56.062661879198,37.872730027914,23.4942208881025,27.1211782146377,25.7878383862103,25.6608669034058,28.0719055080073,21.0240140490742,23.4377674757074,34.4242428940257,31.8250850248294,29.0419611850962,35.420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| |||
|short_description=p1@NDNL2 | |||
}} |
Revision as of 22:34, 11 January 2014
Short description: | p1@NDNL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDNL2_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_ENST00000332303, NM_138704, uc001zco.2_5end |
EntrezGene: | NDNL2 |
HGNC: | 7677 |
UniProt: | Q96MG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.08e-16 | 52 |
lymphocyte | 4.47e-15 | 53 |
common lymphoid progenitor | 4.47e-15 | 53 |
mature alpha-beta T cell | 1.54e-11 | 18 |
alpha-beta T cell | 1.54e-11 | 18 |
immature T cell | 1.54e-11 | 18 |
mature T cell | 1.54e-11 | 18 |
immature alpha-beta T cell | 1.54e-11 | 18 |
T cell | 2.07e-08 | 25 |
pro-T cell | 2.07e-08 | 25 |
leukocyte | 3.32e-08 | 136 |
CD8-positive, alpha-beta T cell | 6.14e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 1.55e-07 | 120 |
nongranular leukocyte | 2.63e-07 | 115 |
lymphocyte of B lineage | 4.26e-07 | 24 |
pro-B cell | 4.26e-07 | 24 |
B cell | 7.36e-07 | 14 |