FFCP PHASE1:Hg19::chr15:33024771..33024780,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=26585 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2001 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=24bp_to_AL359059_5end | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_24_at_GREM1_5end | |||
|id=chr15:33024771..33024780,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.72e-24!75;CL:0000055!8.68e-24!180;CL:0002620!2.63e-19!23;CL:0002334!5.41e-15!12;CL:0000048!4.47e-14!430;CL:0000723!1.61e-13!436;CL:0000034!8.40e-13!444;CL:0002320!1.66e-08!365;CL:0000134!3.34e-08!358;CL:0002371!3.65e-08!591;CL:0000219!4.79e-07!390;CL:0000680!5.52e-07!57;CL:0000056!5.52e-07!57;CL:0000355!5.52e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.60e-18;23!CL:0002579;5.44e-15;3!CL:0000135;1.83e-14;3!CL:0000388;1.83e-14;3!CL:0002334;9.96e-10;12!CL:0002580;2.93e-07;3!CL:0000057;4.77e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.45e-24,76;CL:0002620,4.91e-18,23;CL:0002579,1.01e-14,3;CL:0000135,1.46e-14,3;CL:0000388,1.46e-14,3;CL:0002334,1.40e-09,12;CL:0000048,9.84e-08,427;CL:0000134,1.17e-07,354;CL:0000723,1.62e-07,433;CL:0002320,2.27e-07,361;CL:0000034,3.10e-07,441;CL:0002580,3.44e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.04e-10!14;DOID:17!5.33e-09!5;DOID:450!5.33e-09!5;DOID:66!5.33e-09!5;DOID:423!5.33e-09!5;DOID:0080000!5.33e-09!5;DOID:11722!5.33e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;6.86e-15;5!DOID:450;6.86e-15;5!DOID:66;6.86e-15;5!DOID:423;6.86e-15;5!DOID:0080000;6.86e-15;5!DOID:11722;6.86e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.91e-15,5;DOID:450,8.91e-15,5;DOID:66,8.91e-15,5;DOID:423,8.91e-15,5;DOID:0080000,8.91e-15,5;DOID:11722,8.91e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.18e-15!45;UBERON:0002416!5.18e-15!45;UBERON:0002097!1.38e-14!40;UBERON:0003688!3.15e-10!6;UBERON:0002358!3.15e-10!6;UBERON:0003684!3.15e-10!6;UBERON:0001178!3.15e-10!6;UBERON:0000914!6.00e-10!83;UBERON:0002329!6.00e-10!83;UBERON:0003077!6.00e-10!83;UBERON:0003059!6.00e-10!83;UBERON:0007282!6.00e-10!83;UBERON:0009618!6.00e-10!83;UBERON:0007285!6.00e-10!83;UBERON:0003102!8.89e-10!95;UBERON:0002384!3.79e-09!375;UBERON:0004290!3.21e-08!70;UBERON:0002118!1.42e-07!5;UBERON:0004532!1.42e-07!5;UBERON:0001134!7.31e-07!61;UBERON:0002036!7.31e-07!61;UBERON:0003082!7.31e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.83e-14;3!UBERON:0000043;1.83e-14;3!UBERON:0007845;1.83e-14;3!UBERON:0003688;9.00e-13;6!UBERON:0002358;9.00e-13;6!UBERON:0003684;9.00e-13;6!UBERON:0001178;9.00e-13;6!UBERON:0002097;7.30e-11;41!UBERON:0002199;4.27e-09;46!UBERON:0002416;4.27e-09;46!UBERON:0004457;1.55e-08;9!UBERON:0000042;1.55e-08;9!UBERON:0003102;3.62e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.46e-14,3;UBERON:0000043,1.46e-14,3;UBERON:0007845,1.46e-14,3;UBERON:0002097,1.02e-13,41;UBERON:0003688,2.05e-12,6;UBERON:0002358,2.05e-12,6;UBERON:0003684,2.05e-12,6;UBERON:0001178,2.05e-12,6;UBERON:0002199,5.87e-12,46;UBERON:0002416,5.87e-12,46;UBERON:0003102,2.11e-08,99;UBERON:0002384,1.16e-07,371 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.563817616383885,1.0007329835313,0.446961094427288,3.48935409640147,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0.602694528023977,2.19093027116212,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0.860509862246441,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0.485618833104395,0.140450806702248,0,0,0,0,1.97813543422845,0,0,0,0,0,2.63386572528503,1.5324389789951,0.901428353439581,0,1.07633781413317,1.2813443329114,1.69545520927649,2.70081986475962,0.515262646192195,0.515281080091258,2.41951913231067,0.843881661206331,1.85130309806277,0.757301322732344,1.38074847963449,0.161646056818812,2.84007674013291,1.20902517873168,1.3564847384839,0,0,0,0,0,0,0,0,0,0,5.14592750554308,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,3.03329280955175,1.26161932027148,0.585707074963566,0,0,0,1.32845119707087,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,1.24053903909388,0.920771839728375,3.36792113319688,1.15325234330131,2.04682899626681,3.05622450172854,0,0.616838775210622,0.710246901252508,0.0821271560138091,0.519254429183621,0.348631135379878,0,0,0,0.229628896329213,0.546273504020151,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0,0,0,0,0,2.32422774648643,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,1.78335525740625,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.86623752597084,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0,0.889811221596536,0,0,0.466311601748341,1.03498604992744,0.477890301491107,0,0.155262956876259,0.414706207840855,1.86089200190596,0,0.150257608997218,0.380805212168795,0.406870733204662,1.27294061441792,0.107410557042488,0.464033759878494,0.796191777397232,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,2.46873160583479,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86919826156599,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,2.60396512716726,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p24@GREM1 | |||
}} |
Revision as of 22:40, 11 January 2014
Short description: | p24@GREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_24_at_GREM1_5end |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | 24bp_to_AL359059_5end |
EntrezGene: | GREM1 |
HGNC: | 2001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.45e-24 | 76 |
skin fibroblast | 4.91e-18 | 23 |
omentum preadipocyte | 1.01e-14 | 3 |
fibrocyte | 1.46e-14 | 3 |
tendon cell | 1.46e-14 | 3 |
preadipocyte | 1.40e-09 | 12 |
multi fate stem cell | 9.84e-08 | 427 |
mesenchymal cell | 1.17e-07 | 354 |
somatic stem cell | 1.62e-07 | 433 |
connective tissue cell | 2.27e-07 | 361 |
stem cell | 3.10e-07 | 441 |
preadipocyte of the breast | 3.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.46e-14 | 3 |
tendon | 1.46e-14 | 3 |
regular connective tissue | 1.46e-14 | 3 |
skin of body | 1.02e-13 | 41 |
omentum | 2.05e-12 | 6 |
peritoneum | 2.05e-12 | 6 |
abdominal cavity | 2.05e-12 | 6 |
visceral peritoneum | 2.05e-12 | 6 |
integument | 5.87e-12 | 46 |
integumental system | 5.87e-12 | 46 |
surface structure | 2.11e-08 | 99 |
connective tissue | 1.16e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.91e-15 | 5 |
myotonic disease | 8.91e-15 | 5 |
muscle tissue disease | 8.91e-15 | 5 |
myopathy | 8.91e-15 | 5 |
muscular disease | 8.91e-15 | 5 |
myotonic dystrophy | 8.91e-15 | 5 |