FFCP PHASE1:Hg19::chr15:34880646..34880655,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=23015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31972 | |||
|TSSclassifier=not | |||
|UniProt=F5H2E4 | |||
|association_with_transcript=48bp_to_ENST00000543376_5end | |||
|description=CAGE_peak_2_at_GOLGA8A_5end | |||
|id=chr15:34880646..34880655,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.89e-28!239;DOID:162!2.96e-27!235;DOID:0050687!3.62e-17!143;DOID:0050686!4.71e-15!137;DOID:305!6.91e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.25e-27,239;DOID:162,2.75e-26,235;DOID:0050687,4.48e-17,143;DOID:0050686,2.72e-14,137;DOID:305,1.09e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.06e-12!94;UBERON:0001016!2.06e-12!94;UBERON:0001017!1.46e-10!82;UBERON:0005743!1.66e-10!86;UBERON:0000924!4.36e-10!173;UBERON:0006601!4.36e-10!173;UBERON:0000475!1.01e-09!365;UBERON:0000955!1.25e-09!69;UBERON:0006238!1.25e-09!69;UBERON:0004121!6.52e-09!169;UBERON:0000033!2.73e-08!123;UBERON:0001049!1.11e-07!57;UBERON:0005068!1.11e-07!57;UBERON:0006241!1.11e-07!57;UBERON:0007135!1.11e-07!57;UBERON:0002346!1.54e-07!90;UBERON:0000153!1.56e-07!129;UBERON:0007811!1.56e-07!129;UBERON:0002616!2.70e-07!59;UBERON:0002780!3.90e-07!41;UBERON:0001890!3.90e-07!41;UBERON:0006240!3.90e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.75e-13,89;UBERON:0001017,9.56e-11,81;UBERON:0000955,2.37e-10,68;UBERON:0006238,2.37e-10,68;UBERON:0004121,9.73e-10,171;UBERON:0000924,9.73e-10,171;UBERON:0006601,9.73e-10,171;UBERON:0001049,3.05e-08,56;UBERON:0005068,3.05e-08,56;UBERON:0006241,3.05e-08,56;UBERON:0007135,3.05e-08,56;UBERON:0002780,1.45e-07,41;UBERON:0001890,1.45e-07,41;UBERON:0003080,1.45e-07,41;UBERON:0006240,1.45e-07,41;UBERON:0000073,1.56e-07,53;UBERON:0002616,1.56e-07,53;UBERON:0001893,4.64e-07,34 | |||
|phase1_expression=2.54349730978779,1.49870366723688,4.65149533516705,0,4.46961094427288,2.61701557230111,5.06599756336621,0,0.783556884599516,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0.495065411840187,0.331397375727916,0,0,0,0,1.10808952269109,1.02000345622126,0.940364164434263,2.28988789704845,2.87436292653057,1.38096903554283,0,0.0821005894499457,0,0,0,0.154816123316076,0.919421224478927,0.6024118375565,2.21852406100073,0.0774672005803016,4.54941543959749,2.64240395401362,0.553995408531877,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0,0.272906150057846,0,0,0.641858054152187,0,0,0,0.426224750532694,0,0,0.622822248995575,0.502497330513487,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0.790152254325231,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.255725123687061,5.78302643815306,1.00267582127178,1.59331170856906,5.5670016293577,3.89307896242109,3.02511414925017,1.55210578223795,2.72287835648691,3.53643503843824,0,1.11235332835329,2.59637914923747,1.91542711029194,1.86141144726411,0.476981248610684,0,0.74291500265913,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0.208994966536811,1.03366703667732,2.13459757612026,0.66944122552934,0,0,0.24406205754817,0,0,1.69669483739752,1.12264686313085,0.563057402416611,0,0.949265659568129,0.366403487860815,0,0,0,2.48485975847659,0.633152558322899,9.53346101855175,14.9155042789383,0.709336764396714,0,0,0.98667019366864,0.933633106199299,1.0776853765575,1.30769522490767,2.27036141467397,0.576175924479999,0.468642863667593,1.5608003841516,0,0.747243402759005,1.17434498643765,0.971237666208789,1.26405726032024,1.42907919878425,2.33385202892359,2.06651562351531,4.75201142912821,1.7308685049499,0.910161361938026,0,1.68336113954066,1.7516592782075,2.49357703935765,1.31693286264251,0.30648779579902,1.95309476578576,0.453728732640084,12.1984952268426,2.13557388818567,3.17897851739343,11.1033705551229,1.8549455262919,12.8820270022815,2.79175284497385,8.77636927654584,2.04617710838517,11.8643873894734,1.38074847963449,1.61646056818812,13.1353549231147,1.61203357164224,2.54340888465731,0.386521706326594,1.90922284413584,0.860413786167011,4.26907971453584,4.5060121229305,2.5562667431294,3.31715376049185,3.02785021050754,2.55484151353081,1.56449532329816,2.57296375277154,0,4.64367928031979,5.0531563716871,0.709840800239063,0.674338760312407,0.241011029883482,0.220587945464788,0,0.237270619111097,0,0.588664395376038,0.38474715694639,0,0,1.2347220339942,1.47008711385542,1.26755034821831,2.94848165003288,2.95394953340702,5.29755719297581,0.614942192715568,1.20097467208968,1.86575485194663,1.1240175325762,1.20634766893957,1.48141512253647,1.62904152655162,0,0,0.579652024875384,0.70445216541493,0.144366447761074,0,0.190254152234598,1.58040879591855,0,0,0,0.445893486866185,2.81201501960331,1.84780341018745,2.83550194484773,3.22410681730254,2.3250715081117,0.383382679165211,0.985326475791887,0.264145302039678,0,0.432359860250884,0,1.0159663086747,1.14596527667483,0,1.71072446022705,2.57068731758309,0.600686115687835,3.14409075893636,0.448524337381443,2.1798003441664,0.51336800074665,5.17086863031111,0,0.845302752556,4.25500986535793,6.24044621468197,0.257207374262142,0,2.1313774321288,0.857867961948885,0.542621605391443,2.46972101034231,2.28015329005615,0.710783897485092,0.791951872933429,3.01439377059586,0.871533458600294,1.89948683245908,0,0,0,5.75099653179798,1.14861935834114,0,3.90909528002464,2.26023954805422,3.40215830155802,1.2329365839288,0.197030760201927,0.215627574859517,0,6.35236560556159,5.20559415430487,1.54657762555539,0.670065061337395,1.91381625495949,0,0,0,0.24538298343828,0,0.271265023699736,1.66376689224646,2.49800584316026,5.04647728108591,1.7571212248907,0.601892199455438,2.27407504055985,0,2.65690239414175,0.921845842708516,1.91143951829782,0.195801157462741,1.02943027143257,0,0,0,0,0,0.30239029332968,1.73675465473144,7.05925077125087,3.36792113319688,3.07533958213682,1.53512174720011,2.89537058058494,2.96836132889982,1.85051632563187,1.77561725313127,2.7101961484557,0,1.27831416305955,1.20859449591622,1.00253235151642,3.59115856849996,1.37777337797528,3.45973219212762,0.917870904715969,0,1.46329140498388,1.56869953835371,0,1.47772280450026,0,0.340187410553031,0.647747748306418,0,0.812839312631559,0,1.52925763827023,0.831076008928724,0.895499018888713,0,0,0.512900250232778,2.62411716559765,1.62689197332152,0.206082023295445,4.39533431128048,5.77566499444116,0.574265537996172,0,1.6068392984416,4.54352375972973,2.46477787383431,1.84204409671355,1.51620229732984,3.75970857038958,1.88521702088497,1.78975917573812,2.67096106940212,2.97512847649761,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| |||
|short_description=p2@GOLGA8A | |||
}} |
Revision as of 22:45, 11 January 2014
Short description: | p2@GOLGA8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GOLGA8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000543376_5end |
EntrezGene: | GOLGA8A |
HGNC: | 31972 |
UniProt: | F5H2E4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.75e-13 | 89 |
central nervous system | 9.56e-11 | 81 |
brain | 2.37e-10 | 68 |
future brain | 2.37e-10 | 68 |
ectoderm-derived structure | 9.73e-10 | 171 |
ectoderm | 9.73e-10 | 171 |
presumptive ectoderm | 9.73e-10 | 171 |
neural tube | 3.05e-08 | 56 |
neural rod | 3.05e-08 | 56 |
future spinal cord | 3.05e-08 | 56 |
neural keel | 3.05e-08 | 56 |
regional part of forebrain | 1.45e-07 | 41 |
forebrain | 1.45e-07 | 41 |
anterior neural tube | 1.45e-07 | 41 |
future forebrain | 1.45e-07 | 41 |
regional part of nervous system | 1.56e-07 | 53 |
regional part of brain | 1.56e-07 | 53 |
telencephalon | 4.64e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.25e-27 | 239 |
cancer | 2.75e-26 | 235 |
cell type cancer | 4.48e-17 | 143 |
organ system cancer | 2.72e-14 | 137 |
carcinoma | 1.09e-08 | 106 |