FFCP PHASE1:Hg19::chr15:39420495..39420503,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr15:39420495..39420503,+ | |||
|id=chr15:39420495..39420503,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.72e-25!75;CL:0002139!2.14e-23!24;CL:0000115!8.59e-20!35;CL:0000136!3.49e-15!15;CL:0000071!8.57e-15!18;CL:0002546!8.57e-15!18;CL:0000055!1.37e-14!180;CL:0002078!2.62e-14!44;CL:0002620!9.38e-14!23;CL:0002371!4.50e-13!591;CL:0000048!3.15e-12!430;CL:0000144!8.14e-12!625;CL:0000723!1.00e-11!436;CL:0000213!1.42e-11!57;CL:0000215!1.42e-11!57;CL:0002334!4.35e-11!12;CL:0000034!4.45e-11!444;CL:0005020!8.03e-11!6;CL:0002138!8.03e-11!6;CL:0005022!8.03e-11!6;CL:0000222!2.80e-10!119;CL:0000548!1.89e-08!679;CL:0000004!1.89e-08!679;CL:0000255!1.89e-08!679;CL:0000012!2.80e-08!682;CL:1000413!3.32e-08!9;CL:0002559!1.19e-07!4;CL:1000306!1.65e-07!4;CL:0002547!1.65e-07!4;CL:0000134!2.05e-07!358;CL:0002320!6.08e-07!365;CL:0002544!8.25e-07!6;CL:0002580!9.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;4.30e-17;3!CL:0002620;6.51e-17;23!CL:0002334;1.34e-15;12!CL:0002138;4.86e-09;6!CL:0000346;3.67e-08;3!CL:1000428;3.67e-08;3!CL:0002579;4.88e-08;3!CL:0000136;8.63e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,3.77e-17,3;CL:0002620,9.04e-17,23;CL:0000057,2.25e-16,76;CL:0002334,8.87e-16,12;CL:0005020,4.93e-09,6;CL:0002138,4.93e-09,6;CL:0005022,4.93e-09,6;CL:0000136,7.64e-09,15;CL:0000346,2.97e-08,3;CL:1000428,2.97e-08,3;CL:0002579,3.68e-08,3;CL:0000048,9.54e-08,427;CL:0000723,1.52e-07,433;CL:0000034,2.77e-07,441 | |||
|ontology_enrichment_development_v019=CL:0005022;4.86e-09;6 | |||
|ontology_enrichment_disease=DOID:17!6.05e-09!5;DOID:450!6.05e-09!5;DOID:66!6.05e-09!5;DOID:423!6.05e-09!5;DOID:0080000!6.05e-09!5;DOID:11722!6.05e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.00e-10;5!DOID:450;4.00e-10;5!DOID:66;4.00e-10;5!DOID:423;4.00e-10;5!DOID:0080000;4.00e-10;5!DOID:11722;4.00e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.20e-10,5;DOID:450,4.20e-10,5;DOID:66,4.20e-10,5;DOID:423,4.20e-10,5;DOID:0080000,4.20e-10,5;DOID:11722,4.20e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.19e-19!69;UBERON:0002049!5.19e-18!79;UBERON:0007798!5.19e-18!79;UBERON:0004535!2.99e-17!110;UBERON:0001009!1.88e-16!113;UBERON:0004872!6.88e-16!84;UBERON:0001986!8.57e-15!18;UBERON:0004638!8.57e-15!18;UBERON:0004852!8.57e-15!18;UBERON:0001981!8.64e-15!60;UBERON:0007500!8.64e-15!60;UBERON:0004537!8.64e-15!60;UBERON:0006965!8.64e-15!60;UBERON:0003914!1.94e-11!118;UBERON:0000487!2.05e-11!22;UBERON:0003688!4.18e-11!6;UBERON:0002358!4.18e-11!6;UBERON:0003684!4.18e-11!6;UBERON:0001178!4.18e-11!6;UBERON:0002097!5.95e-11!40;UBERON:0002199!2.65e-10!45;UBERON:0002416!2.65e-10!45;UBERON:0006914!1.32e-09!25;UBERON:0001637!3.89e-09!42;UBERON:0003509!3.89e-09!42;UBERON:0004572!3.89e-09!42;UBERON:0003915!3.32e-08!9;UBERON:0004700!3.32e-08!9;UBERON:0001917!3.32e-08!9;UBERON:0001473!7.47e-08!8;UBERON:0004536!7.47e-08!8;UBERON:0006558!7.47e-08!8;UBERON:0002073!1.19e-07!4;UBERON:0005086!1.19e-07!4;UBERON:0000415!1.65e-07!4;UBERON:0007240!1.65e-07!4;UBERON:0005742!1.65e-07!4;UBERON:0005734!1.65e-07!4;UBERON:0004664!1.65e-07!4;UBERON:0004663!1.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.82e-09;41!UBERON:0000310;6.04e-09;10!UBERON:0002199;7.44e-09;46!UBERON:0002416;7.44e-09;46!UBERON:0003688;1.29e-08;6!UBERON:0002358;1.29e-08;6!UBERON:0003684;1.29e-08;6!UBERON:0001178;1.29e-08;6!UBERON:0000412;3.67e-08;3!UBERON:0001992;3.67e-08;3!UBERON:0001443;3.88e-08;11!UBERON:0001473;7.07e-07;8!UBERON:0004536;7.07e-07;8!UBERON:0006558;7.07e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.49e-13,41;UBERON:0002199,1.18e-11,46;UBERON:0002416,1.18e-11,46;UBERON:0000310,5.80e-09,10;UBERON:0003688,1.12e-08,6;UBERON:0002358,1.12e-08,6;UBERON:0003684,1.12e-08,6;UBERON:0001178,1.12e-08,6;UBERON:0000412,2.97e-08,3;UBERON:0001992,2.97e-08,3;UBERON:0001443,3.75e-08,11;UBERON:0001473,7.16e-07,8;UBERON:0004536,7.16e-07,8;UBERON:0006558,7.16e-07,8 | |||
|phase1_expression=2.72517568905835,0.856402095563933,0.986680828671798,2.00146596706261,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993812036833525,0,0.347140501607594,0.56530794192401,0,0.275118041940067,1.25396979922086,0.775250277507987,0.71153252537342,0.33472061276467,0.402829317109147,3.04108842287405,0.488124115096339,0.367663080345869,0.81014194788176,0.446498641420399,0.44905874525234,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0.506522046658319,20.9206505684886,1.43418310374407,0.354668382198357,0,0,0.74000264525148,0.933633106199299,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0.453728732640084,3.94657198515496,1.06778694409284,1.48352330811693,0.300091096084402,0.515262646192195,2.83404594050192,0.930584281657949,1.0126579934476,0.779496041289589,0.252433774244115,1.38074847963449,1.2931684545505,1.42003837006646,0.302256294682921,1.18692414617341,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,4.14404764057442,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3204282985047,4.1668696131895,6.27838702374174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32969058292435,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.535286966391485,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,3.72161711728165,6.29194090481056,1.40330047216537,1.66580894032411,2.55853624533352,0.965123526861645,1.48418066444991,0,0.532685175939381,0.246381468041427,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0.340187410553031,0.431831832204279,9.25363516141736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,1.56989728039846,0,0,0.117812402345686,0.202182481573316,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0.92947049429925,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63205341010842,0.5013797880454,2.75711019087115,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,2.77402930751307,0,0.754703705257725,0,0,1.20984739010591,0,0.295710299979268,0.63718706865481,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,1.71697852591396,0.673498977531838,0,0,0,0,0.226705925512272,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:39420495..39420503,+ | |||
}} |
Revision as of 22:51, 11 January 2014
Short description: | p@chr15:39420495..39420503, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:39420495..39420503, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 3.77e-17 | 3 |
skin fibroblast | 9.04e-17 | 23 |
fibroblast | 2.25e-16 | 76 |
preadipocyte | 8.87e-16 | 12 |
lymphangioblast | 4.93e-09 | 6 |
endothelial cell of lymphatic vessel | 4.93e-09 | 6 |
vascular lymphangioblast | 4.93e-09 | 6 |
fat cell | 7.64e-09 | 15 |
hair follicle dermal papilla cell | 2.97e-08 | 3 |
stem cell of epidermis | 2.97e-08 | 3 |
omentum preadipocyte | 3.68e-08 | 3 |
multi fate stem cell | 9.54e-08 | 427 |
somatic stem cell | 1.52e-07 | 433 |
stem cell | 2.77e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.49e-13 | 41 |
integument | 1.18e-11 | 46 |
integumental system | 1.18e-11 | 46 |
breast | 5.80e-09 | 10 |
omentum | 1.12e-08 | 6 |
peritoneum | 1.12e-08 | 6 |
abdominal cavity | 1.12e-08 | 6 |
visceral peritoneum | 1.12e-08 | 6 |
dermal papilla | 2.97e-08 | 3 |
papillary layer of dermis | 2.97e-08 | 3 |
chest | 3.75e-08 | 11 |
lymphatic vessel | 7.16e-07 | 8 |
lymph vasculature | 7.16e-07 | 8 |
lymphatic part of lymphoid system | 7.16e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.20e-10 | 5 |
myotonic disease | 4.20e-10 | 5 |
muscle tissue disease | 4.20e-10 | 5 |
myopathy | 4.20e-10 | 5 |
muscular disease | 4.20e-10 | 5 |
myotonic dystrophy | 4.20e-10 | 5 |