FFCP PHASE1:Hg19::chr15:39884859..39884872,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-373bp_to_ENST00000484734_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_36_at_THBS1_5end | |||
|id=chr15:39884859..39884872,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.91e-12!75;CL:0002139!2.03e-11!24;CL:0000115!8.48e-11!35;CL:0000055!2.86e-10!180;CL:0002371!2.91e-10!591;CL:0002078!2.41e-09!44;CL:0000071!1.55e-08!18;CL:0002546!1.55e-08!18;CL:0000144!3.46e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.19e-12;12!CL:0002580;1.52e-10;3!CL:0002579;8.87e-10;3!CL:0002559;2.51e-09;5!CL:0000197;4.03e-08;6!CL:0000098;4.03e-08;6!CL:0002167;4.03e-08;6!CL:0000136;5.39e-08;13!CL:0002617;5.08e-07;2!CL:0002561;8.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,9.11e-12,12;CL:0002580,1.48e-10,3;CL:0002579,9.76e-10,3;CL:0002559,1.55e-09,5;CL:0000057,1.90e-09,76;CL:0000197,3.23e-08,6;CL:0000098,3.23e-08,6;CL:0002167,3.23e-08,6;CL:0000115,1.53e-07,36;CL:0002617,3.29e-07,2;CL:0000136,6.74e-07,15;CL:0002561,8.57e-07,2;CL:0002078,9.41e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.24e-14;5!DOID:450;2.24e-14;5!DOID:66;2.24e-14;5!DOID:423;2.24e-14;5!DOID:0080000;2.24e-14;5!DOID:11722;2.24e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.54e-14,5;DOID:450,2.54e-14,5;DOID:66,2.54e-14,5;DOID:423,2.54e-14,5;DOID:0080000,2.54e-14,5;DOID:11722,2.54e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.43e-13!69;UBERON:0001981!7.05e-12!60;UBERON:0007500!7.05e-12!60;UBERON:0004537!7.05e-12!60;UBERON:0006965!7.05e-12!60;UBERON:0002049!9.59e-12!79;UBERON:0007798!9.59e-12!79;UBERON:0004872!1.67e-10!84;UBERON:0003914!5.73e-09!118;UBERON:0001986!1.55e-08!18;UBERON:0004638!1.55e-08!18;UBERON:0004852!1.55e-08!18;UBERON:0004535!4.26e-08!110;UBERON:0003102!5.08e-08!95;UBERON:0000487!6.74e-08!22;UBERON:0000468!8.31e-08!659;UBERON:0001637!1.64e-07!42;UBERON:0003509!1.64e-07!42;UBERON:0004572!1.64e-07!42;UBERON:0001009!1.67e-07!113;UBERON:0000467!6.29e-07!625;UBERON:0003688!6.89e-07!6;UBERON:0002358!6.89e-07!6;UBERON:0003684!6.89e-07!6;UBERON:0001178!6.89e-07!6;UBERON:0000480!7.74e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.36e-12;6!UBERON:0002358;1.36e-12;6!UBERON:0003684;1.36e-12;6!UBERON:0001178;1.36e-12;6!UBERON:0002073;2.51e-09;5!UBERON:0004457;2.90e-08;9!UBERON:0000042;2.90e-08;9!UBERON:0000310;1.02e-07;10!UBERON:0005406;3.99e-07;2!UBERON:0001443;5.62e-07;11!UBERON:0005933;8.17e-07;2!UBERON:0005942;8.17e-07;2!UBERON:0005932;8.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.62e-12,6;UBERON:0002358,1.62e-12,6;UBERON:0003684,1.62e-12,6;UBERON:0001178,1.62e-12,6;UBERON:0002073,1.55e-09,5;UBERON:0005086,1.55e-09,5;UBERON:0000310,8.19e-08,10;UBERON:0005406,3.60e-07,2;UBERON:0001443,4.63e-07,11;UBERON:0005933,8.57e-07,2;UBERON:0005942,8.57e-07,2;UBERON:0005932,8.57e-07,2;UBERON:0000055,9.53e-07,68 | |||
|phase1_expression=1.99846217197612,4.06790995392868,0.845726424575827,5.00366491765652,1.34088328328186,6.97870819280295,2.53299878168311,0,0,0.245733936501509,0,0.436882744260345,0.791300934685361,0,0.331397375727916,1.34465029290355,1.20538905604795,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0,0,0,0,0.290796477559129,0,0,0.464858073811369,0,0,0,0,0,0.689491361473237,0,0,0.188242339542605,0,0.449446968890169,0.612167784741805,0,0,0,0,0,1.7412554317715,0,0,0.251248665256743,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0,3.39184765154406,0.419499436209906,0.550236083880135,0.835979866147242,0.516833518338658,0,0.66944122552934,1.20848795132744,1.52054421143703,0.488124115096339,0.367663080345869,2.43042584364528,0.625098097988558,0.44905874525234,0.112611480483322,0,0,1.28241220751285,0,0,0,4.96971951695318,0.506522046658319,0.926864265692532,0.573673241497627,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,2.37600571456411,4.20353779773547,0,0,0,0,0.277064115484183,0.438977620880838,1.83892677479412,2.55404700141215,0.113432183160021,2.15267562826634,1.70845911054854,1.69545520927649,2.10063767259082,1.03052529238439,0.772921620136887,0.37223371266318,2.36286865137773,0.779496041289589,0.504867548488229,0.920498986422993,0.323292113637624,0.710019185033229,0.403008392910561,0,0,0.272746120590835,0.860413786167011,0,0,0,0,0,0,1.56449532329816,1.92972281457866,0,2.3218396401599,1.44375896333917,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,1.58803092537181,4.1668696131895,2.47330397904978,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0.53735113621709,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0.500170521059677,0,1.66376689224646,4.46072471992904,2.83864347061082,1.28855556491985,0.300946099727719,0,0,0,0.737476674166813,0.434418072340414,0,0,0,0.215714200818617,0,0,1.66435439510497,0,4.21783273291921,5.52463103837025,3.92924132206303,1.40953064181271,4.60536524160033,2.2519548960105,1.48418066444991,0.308419387605311,0.355123450626254,0,0,0,0,0.601519410909855,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,1.13733384070897,0.170093705276516,0.647747748306418,4.62681758070868,0,0.501689773854853,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0.290033387828457,0,0.0890320356467374,0,0.192190067365106,1.53135254993501,0.30347334256665,0,0,0,0,0,0,0.55597265731176,0.286249773483982,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,1.26377536871694,0,0,1.05650146756755,0.272999822815972,0,0,0,0,0.438450885253763,0.578775534266688,0,1.01455188481352,0.92947049429925,0,0.573645408816206,0.0982490410131212,1.426684205925,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0.43050537267123,0,1.33029046061003,1.60806380144872,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,2.14870036263921,0.890894042497916,2.45728561679386,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,2.48831670129446,0.808815160325942,0,0,0.197286811273867,0,3.33410970433911,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0.638002319463839,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,1.71906176567983,0,1.11712960508902,0,0.717873024576814,0,0,0,0.0671834724867263,5.76479813667846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,1.70388021785422,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0.727394636810238,0.107410557042488,0.464033759878494,2.78667122089031,0.400027764663154,0.686791410365586,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.352675943690684,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0.762764190934334,0,0,0,0,0.781514011233092,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0,0,0,0,3.20684545892101,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,6.62715747282486,0.187967835959707,0.128915775947154,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0,0.244209805832924,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p36@THBS1 | |||
}} |
Revision as of 22:56, 11 January 2014
Short description: | p36@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -373bp_to_ENST00000484734_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 9.11e-12 | 12 |
preadipocyte of the breast | 1.48e-10 | 3 |
omentum preadipocyte | 9.76e-10 | 3 |
hair follicle cell | 1.55e-09 | 5 |
fibroblast | 1.90e-09 | 76 |
receptor cell | 3.23e-08 | 6 |
sensory epithelial cell | 3.23e-08 | 6 |
olfactory epithelial cell | 3.23e-08 | 6 |
endothelial cell | 1.53e-07 | 36 |
adipocyte of breast | 3.29e-07 | 2 |
fat cell | 6.74e-07 | 15 |
outer root sheath cell | 8.57e-07 | 2 |
meso-epithelial cell | 9.41e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.62e-12 | 6 |
peritoneum | 1.62e-12 | 6 |
abdominal cavity | 1.62e-12 | 6 |
visceral peritoneum | 1.62e-12 | 6 |
hair follicle | 1.55e-09 | 5 |
hair follicle placode | 1.55e-09 | 5 |
breast | 8.19e-08 | 10 |
perirenal fat | 3.60e-07 | 2 |
chest | 4.63e-07 | 11 |
hair root sheath | 8.57e-07 | 2 |
hair outer root sheath | 8.57e-07 | 2 |
bulb of hair follicle | 8.57e-07 | 2 |
vessel | 9.53e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.54e-14 | 5 |
myotonic disease | 2.54e-14 | 5 |
muscle tissue disease | 2.54e-14 | 5 |
myopathy | 2.54e-14 | 5 |
muscular disease | 2.54e-14 | 5 |
myotonic dystrophy | 2.54e-14 | 5 |