FFCP PHASE1:Hg19::chr15:39886511..39886611,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=242bp_to_ENST00000559746_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_12_at_THBS1_5end | |||
|id=chr15:39886511..39886611,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.69e-18!180;CL:0002371!7.42e-17!591;CL:0000057!2.90e-15!75;CL:0000144!3.45e-13!625;CL:0000222!1.06e-12!119;CL:0000220!2.46e-12!246;CL:0002321!5.90e-12!248;CL:0002139!6.42e-12!24;CL:0000115!4.33e-11!35;CL:0000548!1.08e-10!679;CL:0000004!1.08e-10!679;CL:0000255!1.08e-10!679;CL:0000012!2.52e-10!682;CL:0002078!5.78e-10!44;CL:0000071!6.97e-09!18;CL:0002546!6.97e-09!18;CL:0000192!1.50e-07!42;CL:0000514!1.50e-07!42;CL:0000359!2.01e-07!32;CL:0002620!3.08e-07!23;CL:0002334!3.90e-07!12;CL:0000213!4.63e-07!57;CL:0000215!4.63e-07!57;CL:0000680!7.24e-07!57;CL:0000056!7.24e-07!57;CL:0000355!7.24e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.36e-14;24!CL:0000071;1.30e-10;18!CL:0000115;2.70e-10;36!CL:0002620;6.51e-08;23!CL:0002334;1.36e-07;12!CL:0000359;2.10e-07;32!CL:0002078;2.57e-07;45!CL:0000349;4.57e-07;19!CL:0000057;8.40e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.84e-17,76;CL:0002139,2.58e-14,24;CL:0000222,6.86e-12,121;CL:0000115,8.68e-12,36;CL:0000071,1.40e-10,18;CL:0002546,1.40e-10,18;CL:0002078,7.48e-10,45;CL:0000723,2.54e-09,433;CL:0002321,4.05e-09,250;CL:0000048,8.62e-09,427;CL:0000034,2.70e-08,441;CL:0002620,6.90e-08,23;CL:0000359,8.19e-08,32;CL:0002334,1.37e-07,12;CL:0000213,1.86e-07,58;CL:0000215,1.86e-07,58;CL:0000192,2.21e-07,43;CL:0000514,2.21e-07,43;CL:0000349,5.16e-07,19 | |||
|ontology_enrichment_development_v019=CL:0002546;1.30e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.66e-17!79;UBERON:0007798!1.66e-17!79;UBERON:0000055!1.68e-17!69;UBERON:0004872!9.97e-17!84;UBERON:0000468!3.95e-16!659;UBERON:0001981!1.00e-15!60;UBERON:0007500!1.00e-15!60;UBERON:0004537!1.00e-15!60;UBERON:0006965!1.00e-15!60;UBERON:0000467!1.65e-14!625;UBERON:0000480!1.82e-14!626;UBERON:0001009!1.38e-13!113;UBERON:0004535!1.72e-13!110;UBERON:0003914!4.58e-13!118;UBERON:0003102!5.76e-12!95;UBERON:0001637!1.17e-11!42;UBERON:0003509!1.17e-11!42;UBERON:0004572!1.17e-11!42;UBERON:0000490!4.93e-11!138;UBERON:0000926!3.58e-10!448;UBERON:0004120!3.58e-10!448;UBERON:0006603!3.58e-10!448;UBERON:0002100!1.65e-09!216;UBERON:0002199!2.15e-09!45;UBERON:0002416!2.15e-09!45;UBERON:0005256!6.65e-09!143;UBERON:0001986!6.97e-09!18;UBERON:0004638!6.97e-09!18;UBERON:0004852!6.97e-09!18;UBERON:0000914!1.10e-08!83;UBERON:0002329!1.10e-08!83;UBERON:0003077!1.10e-08!83;UBERON:0003059!1.10e-08!83;UBERON:0007282!1.10e-08!83;UBERON:0009618!1.10e-08!83;UBERON:0007285!1.10e-08!83;UBERON:0000487!1.27e-08!22;UBERON:0000486!1.50e-08!82;UBERON:0004573!2.16e-08!33;UBERON:0004571!2.16e-08!33;UBERON:0002097!2.45e-08!40;UBERON:0006914!5.13e-08!25;UBERON:0000475!4.18e-07!365;UBERON:0004923!4.51e-07!57;UBERON:0003081!5.27e-07!216;UBERON:0004290!9.75e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.03e-10;22!UBERON:0004638;1.30e-10;18!UBERON:0001986;1.30e-10;18!UBERON:0004852;1.30e-10;18!UBERON:0006914;3.74e-10;25!UBERON:0001637;5.65e-10;42!UBERON:0003509;5.65e-10;42!UBERON:0004572;5.65e-10;42!UBERON:0007500;9.38e-10;56!UBERON:0001981;9.38e-10;56!UBERON:0004537;9.38e-10;56!UBERON:0000055;2.29e-09;65!UBERON:0002097;5.14e-08;41!UBERON:0004573;8.01e-08;33!UBERON:0004571;8.01e-08;33!UBERON:0002199;1.83e-07;46!UBERON:0002416;1.83e-07;46!UBERON:0002049;5.62e-07;75!UBERON:0007798;5.62e-07;75!UBERON:0000490;8.06e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.30e-18,68;UBERON:0004872,8.99e-17,83;UBERON:0002049,1.27e-16,78;UBERON:0007798,1.27e-16,78;UBERON:0007500,1.86e-16,59;UBERON:0001981,1.86e-16,59;UBERON:0004537,1.86e-16,59;UBERON:0006965,1.86e-16,59;UBERON:0003914,1.49e-12,117;UBERON:0001637,3.50e-12,42;UBERON:0003509,3.50e-12,42;UBERON:0004572,3.50e-12,42;UBERON:0003102,4.78e-12,99;UBERON:0004535,1.58e-11,109;UBERON:0001009,5.06e-11,112;UBERON:0002199,7.46e-11,46;UBERON:0002416,7.46e-11,46;UBERON:0004638,1.40e-10,18;UBERON:0001986,1.40e-10,18;UBERON:0004852,1.40e-10,18;UBERON:0000487,1.55e-10,22;UBERON:0000490,4.60e-10,148;UBERON:0006914,5.08e-10,25;UBERON:0002097,6.17e-10,41;UBERON:0000926,1.04e-08,315;UBERON:0004120,1.04e-08,315;UBERON:0006603,1.04e-08,315;UBERON:0004923,1.16e-08,66;UBERON:0003081,2.01e-08,203;UBERON:0004573,2.56e-08,33;UBERON:0004571,2.56e-08,33;UBERON:0000486,2.91e-07,83 | |||
|phase1_expression=29.4318974418302,74.0787812662802,17.1964372997085,55.0403140942217,14.3027550216732,50.5956343978214,10.1319951267324,1.26343974685366,0.522371256399677,5.16041266653169,0.697801167972428,6.334799791775,9.49561121622433,0.866364470720326,2.31978163009541,18.8251041006497,7.8350288643117,10.9546513558106,16.5897151588772,0.492484232307152,0.816002764977012,0.626909442956176,0.572471974262113,1.23186982565596,1.50651167513763,0,0,0,1.18009283054671,0,1.85779347979291,0.919421224478927,2.10844143144775,1.47901604066715,0,0,0,1.10799081706375,6.61796676651468,0,0.447830948479849,0,0.515151135268373,2.4717700592526,0,0,11.8538808821899,1.23350366406548,0.309706370895104,11.507695692886,1.7931249457037,0.47296445977717,13.4450815487281,1.93645405075148,0,9.60035931667284,1.09162460023138,0.674170453335254,12.8555234795779,1.28371610830437,0.639337125799041,5.27762080298746,0.199463657621632,0.852449501065388,30.1817608173727,2.26954089876456,3.73693349397345,11.8086872670669,6.77927793946262,0.65156653411535,15.1349875658342,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0.22465726229299,2.70318407114711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,5.62595272111533,1.80719576192283,8.02140657017423,3.91085601194224,3.9764297352555,13.1391414981712,0.661743720148475,1.33037638477538,0.614843499851882,0.327447688744282,1.82147644146271,3.33705998505986,0,0,0,0.238490624305342,0,0,7.35420907256809,4.30117297553062,7.28995053375948,7.91431118693613,7.1314904155684,15.9568464325239,8.15080369493561,8.78616981175718,5.33649394030065,10.3763389957048,7.25092770796465,7.60272105718513,9.51842024437861,9.19157700864672,23.494116488571,6.42958043645374,3.81699933464489,5.51796254368279,6.13266549863533,5.69559395740877,8.42728022079873,0,0,2.18047026071267,59.1396622517429,12.4097901431288,12.9760997196954,5.44989579422746,0.354668382198357,3.36406560085384,17.0798393167528,19.4867363249556,1.55605517699883,2.02066008104532,4.57693328717684,1.05950199351452,1.15235184896,0,0.312160076830321,1.1409436430889,1.64393548606981,0,0.161872944368132,0.421352420106746,2.04154171254893,1.47401180774122,2.06651562351531,13.0680314301026,35.8537047453907,0.910161361938026,0,0.336672227908132,0.250237039743928,2.21651292387346,6.58466431321257,28.1968772135098,18.629519304418,6.57906662328122,31.213796609862,23.2777553812239,19.0738711043606,11.4034616512073,9.2747276314595,14.9431513226465,13.5865305122061,15.864975230679,7.60008640257349,11.8643873894734,12.9790357085642,6.7891343863901,23.0756235135799,5.13835700960965,8.47802961552438,4.05847791642923,5.72766853240753,4.58887352622406,0.121973706129595,0,0.116193942869518,0.207322110030741,0.252320850875628,0,18.7739438795779,50.8160341172379,9.66944449467364,21.825292617503,5.77503585335668,0.473227200159376,0.505754070234305,0.241011029883482,0.661763836394364,0.871517776369625,0.71181185733329,0.404493924480493,0.196221465125346,1.15424147083917,2.21446636387394,1.40241773803446,1.6462960453256,0,0,0,0,0,0.245976877086227,0.514703430895577,6.69476740992616,2.24803506515239,3.9206299240536,2.87024179991442,0.325808305310325,3.11980435583874,0,0.231860809950154,0.352226082707465,11.693682268647,30.5570438300563,24.7330397904978,1.58040879591855,0,0,0,0,6.56136837907439,8.7350706663407,3.82792762554443,7.07512329352502,2.90633938513962,10.3513323374607,0,0,0,0,0,0.190493682876507,0,0,1.71072446022705,0.719792448923265,0,0,0,0,0.07333828582095,1.80980402060889,0,2.535908257668,11.4353390131494,3.12022310734098,1.28603687131071,0,0.532844358032199,1.57275793023962,0,3.29296134712308,1.30294473717494,2.48774364119782,0,0,0,0,0,0,0,6.46987109827273,2.29723871668228,0,3.90909528002464,4.31500277355805,4.29746311775749,0,0,0,0.128343036279748,0,0,0.773288812777695,0.670065061337395,2.55175500661265,0,0,0,0.981531933753119,1.00034104211935,0.813795071099207,30.9876583680903,69.4088766420959,30.9096733466512,28.8167880882074,5.71797589482666,9.09630016223939,2.0694614258501,4.64957918974806,3.13427586520895,7.38510722978704,0.783204629850962,0.343143423810856,0.82707210449155,0.215714200818617,0.960548020230999,2.12189300012382,8.32177197552485,5.14063498660456,34.9832009024475,58.929397742616,73.2522846470322,15.2485587614284,35.3078001856025,57.2639959271243,19.2943486378488,6.9394362211195,6.39222211127257,0.98552587216571,5.71179872101983,2.20799719073923,0.362578348774867,13.2334270400168,1.10497186723076,3.21480454860899,1.45672934405374,3.2781103739856,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,5.68666920354483,5.10281115829547,9.50030030849413,23.1340879035434,0.812839312631559,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,1.31205858279882,0,0.206082023295445,0.0915694648183434,0.247528499761764,3.44559322797703,11.7010844286574,11.2478750890912,0.386682873168488,0,0.307007349452259,1.37836572484531,0.859361958946189,1.59518363305651,0.340906509664404,0.445160178233687,4.79326254546837,10.7626437724459,12.2508203994801,1.31505115112215,0.464845549297286,10.7036197922418,1.3940745403212,0.924100740528266,2.66153015158511,0,6.67167188774112,0.858749320451947,1.116475108079,2.21465597303108,1.71567174531442,0.255897791311334,0.855877976067841,0,2.35484592059769,4.49681143958287,1.37268514868027,1.17812402345686,1.2130948894399,3.17020642346017,2.94880919367287,0,3.41198885483798,7.39551027297288,1.09199929126389,5.09059555033366,1.13008116620243,2.75682671773062,9.28814565337708,14.0304283281204,1.73632660280006,3.27947376023316,6.49313206280653,9.914351939192,3.94373843545138,1.72093622644862,2.84922218938051,14.9801841622125,0.354761064070598,2.11107635297664,1.64647446479951,0.379473173765715,0.349934720244983,1.92444225451024,5.3624182042863,1.08890984861323,0.376575203107117,7.74909670808214,3.36942951335251,5.76459199597678,21.1345528190403,0,0,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,11.5497582631603,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0,0.146508179271894,0,0,0,16.4733694469006,5.93929361665277,34.0948379330148,0,0,0.445234820091624,0,0,0.398495976502139,0.828851746593443,0,0.818149460017238,0,16.4850981460758,6.20091622916555,0.179021174675609,0,1.87422470710174,0,11.1136990144637,0,0.0927680981618513,0,1.04171104434093,0.0874599999961957,0,0,1.01701460117107,0,0,0,0,0,0.120596438625408,0,0,0,0,0.435753854075961,0.41827123283581,0.461701551022782,1.93701494939902,0,0,0,7.33702667383415,6.3202339447285,2.13213910407454,0,0,0,0,0,0,0,0,0,0.489698424477443,0.424059214301822,0,0,0.265372693510018,0,0,0,0,0,2.40773294189637,0,0,0.19566461893209,0,0.394584402849391,3.62972148145992,1.83643656978294,1.39010475182674,0,0,0.664653872707185,0.661983911750998,0.313932918407225,1.19472429772959,0.569219092059585,0.832048038078832,0,0.391969589657511,1.30588809870604,1.39781334593624,0,0,0,0,0.193978032976839,0,0.90392296312213,0.959293472527256,0,0.0633107959558787,0.391102765469606,2.64524106830061,1.06726497369676,0,0,0,0,0.288109595976299,0.124252535565433,0.707082103850386,0.135904206073614,0.104602846312333,3.46793939963494,0,0,0,0,4.72741985561953,0.525774708558629,4.18923601908381,0.229160424011684,4.30723814746088,0.798716001995964,0.858452096273142,1.11585728720936,0.53746777989381,48.2801843946821,0,0.236349546921671,0.247247575143499,0.337017719270924,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.577000469484979,0.211200673038813,0,1.53532157855556,0,2.64836788146173,0,0,1.72844298240254,0.326587360109409,1.19730191562487,0,18.0611303092547,0.453248366080503,0.146552233678082,1.32506888912221,0.129282956361551,0,0,0,3.41719720216623,1.88645166119599,0.414239055347196,0.992332043623902,0.197611631897944,0,0.638341257770182,0,0.5013797880454,0,1.31149052283922,0,0,0,0,0.573409195690071,0,0,0,1.12482367165896,0,0,0.235265819698172,0.468334905806882,0.28984205722165,1.04478362020812,2.10341978862502,3.32883516901568,2.46223906857616,3.27038272278348,1.77962244319307,0,1.36107831386915,0.777186002913902,2.66139269981341,1.11507737014592,0,2.79473322377267,0,4.25346743292792,10.9566462980464,1.95334891696384,1.90402606084398,1.22061219961398,4.9099137984691,0.429642228169954,3.71227007902795,26.6724245428073,30.0020823497365,4.12074846219351,3.03074539889327,0,0.57785949122191,0.214441591374926,0.260994291965212,13.3756496052241,6.01958433241968,2.93684045407761,0.537266523244462,0,0,0.176689145945881,0,0,1.02496607435179,1.0362910251936,0.303859956177382,0,0,0,0,1.63804924423206,0.983091635014877,0,0,0,0,2.27006381426734,1.28874165176289,0.139879507719444,1.86623178009892,0,0,0,0,0,0,0,0,17.1722349352846,0,0,7.75887076119505,15.6185193450132,0,0,0,0,0.252071696221718,0,0,0,0,0.353909170043221,0.733714394086716,4.38997531371285,6.10211352747467,0,0.596748666348824,0.752103283492572,1.0085253435176,0,0,9.66254313309571,1.18284868973636,0.0675375846183947,0,0,0,0.546974809018219,0,0.992422356778588,0,2.04419884223352,0,0,0.606965604236632,0,0.354809480650555,0,5.31612829255997,0,0,0,0.556157009460346,0.39246546425257,0,0.840816489941367,0.913158720509496,2.15927591218621,0.47775168788705,0,0,0,0.869291361512897,10.4222477414933,0.828864656652147,0.3414369541879,0,0,0.236664001461131,0.255640214277473,0.423387050190929,1.3746412112643,0,0,0,0,0.121917924982269,0,0.307988420568741,0,1.94284397223656,0,0,0,0,0,0,0.308696632431779,0,0,0.735444965261716,0,0.392616934229891,0,0,38.4035279194466,1.4097587696978,0.580120991762195,0,0,1.05868461514708,0.882655033580851,1.46067277649303,0.458729283404541,0,0,0.0679914901909147,0.436350690340377,3.1741610430924,29.3876064351734,6.00828317220844,9.08515780459957,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0.103432995861895,0,0.476128862927481,0,0.124149428591716,2.91542842709595,0.572824424503484,1.41482032270754,0.870866991587845,0.684466602170562,0.26940821205835,1.07583308089015,1.33064142618405,0.732629417498771,0.747091421144008,19.307228228694,0.0898252021065869,4.69281884806909,0.977931553462932,0,1.33151354837103,0,0 | |||
|short_description=p12@THBS1 | |||
}} |
Revision as of 22:56, 11 January 2014
Short description: | p12@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 242bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.84e-17 | 76 |
endothelial cell of vascular tree | 2.58e-14 | 24 |
mesodermal cell | 6.86e-12 | 121 |
endothelial cell | 8.68e-12 | 36 |
blood vessel endothelial cell | 1.40e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.40e-10 | 18 |
meso-epithelial cell | 7.48e-10 | 45 |
somatic stem cell | 2.54e-09 | 433 |
embryonic cell | 4.05e-09 | 250 |
multi fate stem cell | 8.62e-09 | 427 |
stem cell | 2.70e-08 | 441 |
skin fibroblast | 6.90e-08 | 23 |
vascular associated smooth muscle cell | 8.19e-08 | 32 |
preadipocyte | 1.37e-07 | 12 |
lining cell | 1.86e-07 | 58 |
barrier cell | 1.86e-07 | 58 |
smooth muscle cell | 2.21e-07 | 43 |
smooth muscle myoblast | 2.21e-07 | 43 |
extraembryonic cell | 5.16e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.30e-18 | 68 |
splanchnic layer of lateral plate mesoderm | 8.99e-17 | 83 |
vasculature | 1.27e-16 | 78 |
vascular system | 1.27e-16 | 78 |
epithelial tube open at both ends | 1.86e-16 | 59 |
blood vessel | 1.86e-16 | 59 |
blood vasculature | 1.86e-16 | 59 |
vascular cord | 1.86e-16 | 59 |
epithelial tube | 1.49e-12 | 117 |
artery | 3.50e-12 | 42 |
arterial blood vessel | 3.50e-12 | 42 |
arterial system | 3.50e-12 | 42 |
surface structure | 4.78e-12 | 99 |
cardiovascular system | 1.58e-11 | 109 |
circulatory system | 5.06e-11 | 112 |
integument | 7.46e-11 | 46 |
integumental system | 7.46e-11 | 46 |
blood vessel endothelium | 1.40e-10 | 18 |
endothelium | 1.40e-10 | 18 |
cardiovascular system endothelium | 1.40e-10 | 18 |
simple squamous epithelium | 1.55e-10 | 22 |
unilaminar epithelium | 4.60e-10 | 148 |
squamous epithelium | 5.08e-10 | 25 |
skin of body | 6.17e-10 | 41 |
mesoderm | 1.04e-08 | 315 |
mesoderm-derived structure | 1.04e-08 | 315 |
presumptive mesoderm | 1.04e-08 | 315 |
organ component layer | 1.16e-08 | 66 |
lateral plate mesoderm | 2.01e-08 | 203 |
systemic artery | 2.56e-08 | 33 |
systemic arterial system | 2.56e-08 | 33 |
multilaminar epithelium | 2.91e-07 | 83 |