FFCP PHASE1:Hg19::chr15:40532837..40532851,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56924 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000560806_5end | |||
|description=CAGE_peak_8_at_PAK6_5end | |||
|id=chr15:40532837..40532851,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.02e-33!43;CL:0000223!1.67e-24!59;CL:0002368!9.94e-19!13;CL:0002251!5.11e-18!21;CL:0002159!2.21e-15!13;CL:0000066!8.40e-15!254;CL:0000622!1.05e-13!5;CL:0000154!2.43e-11!6;CL:0000244!2.80e-10!4;CL:0000731!2.80e-10!4;CL:0002202!3.16e-10!9;CL:0002632!3.16e-10!9;CL:0002166!5.66e-09!3;CL:0002623!6.44e-09!3;CL:0000076!7.51e-09!62;CL:0002328!9.25e-09!3;CL:0000068!1.05e-08!3;CL:0000069!1.05e-08!3;CL:0000307!1.05e-08!3;CL:0000377!1.05e-08!3;CL:0002621!2.89e-08!3;CL:0000150!2.17e-07!9;CL:0002327!7.43e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;7.49e-31;13!CL:0002076;2.17e-28;42!CL:0000622;4.71e-26;5!CL:0002251;9.08e-24;20!CL:0002159;6.05e-23;14!CL:0000154;1.10e-21;6!CL:0002166;1.51e-16;3!CL:0000307;2.76e-16;3!CL:0002623;3.40e-16;3!CL:0002202;1.65e-14;9!CL:0002632;1.65e-14;9!CL:0000150;2.16e-14;9!CL:0002327;1.31e-12;4!CL:0000317;1.24e-11;2!CL:1000448;1.24e-11;2!CL:0002308;1.24e-11;2!CL:0002140;1.24e-11;2!CL:0000575;2.11e-11;2!CL:0002328;4.08e-08;3!CL:0002077;8.41e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.62e-40,42;CL:0002368,1.29e-30,13;CL:0000223,1.22e-27,58;CL:0000622,4.27e-26,5;CL:0002251,8.92e-24,20;CL:0002159,5.34e-23,14;CL:0000154,1.01e-21,6;CL:0000066,9.78e-20,253;CL:0002166,1.60e-16,3;CL:0002623,2.08e-16,3;CL:0000068,5.59e-16,3;CL:0000069,5.59e-16,3;CL:0000307,5.59e-16,3;CL:0000377,5.59e-16,3;CL:0000150,2.05e-14,9;CL:0002202,2.29e-14,9;CL:0002632,2.29e-14,9;CL:0002327,1.22e-12,4;CL:0000575,1.15e-11,2;CL:0000317,1.85e-11,2;CL:1000448,1.85e-11,2;CL:0002308,1.85e-11,2;CL:0002140,1.85e-11,2;CL:0000076,3.41e-11,63;CL:0002321,3.86e-10,250;CL:0002077,9.74e-09,34;CL:0002328,3.81e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.76e-16;3!CL:0000223;4.53e-15;58 | |||
|ontology_enrichment_disease=DOID:1749!1.42e-16!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.50e-17;14!DOID:3151;7.55e-07;1!DOID:3149;7.55e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.88e-17,14;DOID:3151,7.77e-07,1;DOID:3149,7.77e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000161!5.13e-16!35;UBERON:0000166!6.88e-15!21;UBERON:0001004!4.78e-14!72;UBERON:0003729!7.32e-13!5;UBERON:0000165!2.17e-12!28;UBERON:0000930!2.17e-12!28;UBERON:0000365!3.85e-12!5;UBERON:0004119!6.03e-12!169;UBERON:0000925!6.03e-12!169;UBERON:0006595!6.03e-12!169;UBERON:0003343!1.18e-10!4;UBERON:0004785!1.18e-10!4;UBERON:0005910!4.71e-10!6;UBERON:0003102!7.14e-10!95;UBERON:0000344!3.14e-09!12;UBERON:0000153!9.16e-09!129;UBERON:0007811!9.16e-09!129;UBERON:0004815!9.25e-09!3;UBERON:0002031!9.25e-09!3;UBERON:0000033!9.66e-09!123;UBERON:0001444!2.23e-08!48;UBERON:0007196!2.54e-08!14;UBERON:0001558!2.54e-08!14;UBERON:0001949!2.89e-08!3;UBERON:0000065!3.38e-07!53;UBERON:0004121!5.74e-07!169;UBERON:0001911!7.43e-07!4;UBERON:0005333!7.43e-07!4;UBERON:0008425!7.43e-07!4;UBERON:0005311!7.43e-07!4;UBERON:0001708!8.50e-07!4;UBERON:0001704!8.50e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.31e-12;4!UBERON:0001708;1.54e-12;4!UBERON:0008895;1.54e-12;4!UBERON:0000161;1.79e-12;19!UBERON:0000166;1.79e-12;19!UBERON:0003343;2.41e-12;4!UBERON:0004785;2.41e-12;4!UBERON:0002419;1.24e-11;2!UBERON:0007771;1.24e-11;2!UBERON:0003297;1.24e-11;2!UBERON:0001821;1.24e-11;2!UBERON:0003487;1.24e-11;2!UBERON:0001820;1.24e-11;2!UBERON:0000165;1.42e-10;28!UBERON:0011159;3.99e-10;5!UBERON:0003729;1.04e-09;13!UBERON:0002365;1.50e-09;31!UBERON:0002330;1.50e-09;31!UBERON:0007196;1.33e-08;15!UBERON:0001558;1.33e-08;15!UBERON:0000974;2.20e-08;6!UBERON:0001044;2.44e-08;6!UBERON:0003293;2.44e-08;6!UBERON:0003294;2.44e-08;6!UBERON:0010047;2.44e-08;6!UBERON:0003408;2.44e-08;6!UBERON:0000167;2.44e-08;6!UBERON:0004815;4.08e-08;3!UBERON:0002031;4.08e-08;3!UBERON:0003126;3.03e-07;7!UBERON:0001005;3.03e-07;7!UBERON:0001004;3.05e-07;65!UBERON:0007811;6.32e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.43e-14,74;UBERON:0000033,5.67e-13,56;UBERON:0001911,1.22e-12,4;UBERON:0005333,1.22e-12,4;UBERON:0008425,1.22e-12,4;UBERON:0005311,1.22e-12,4;UBERON:0001708,1.60e-12,4;UBERON:0008895,1.60e-12,4;UBERON:0003343,2.77e-12,4;UBERON:0004785,2.77e-12,4;UBERON:0003102,1.78e-11,99;UBERON:0000153,1.85e-11,62;UBERON:0007811,1.85e-11,62;UBERON:0002419,1.85e-11,2;UBERON:0007771,1.85e-11,2;UBERON:0003297,1.85e-11,2;UBERON:0001821,1.85e-11,2;UBERON:0003487,1.85e-11,2;UBERON:0001820,1.85e-11,2;UBERON:0005089,1.85e-11,2;UBERON:0005088,1.85e-11,2;UBERON:0000166,1.01e-10,22;UBERON:0000165,3.49e-10,29;UBERON:0000930,3.49e-10,29;UBERON:0011159,4.12e-10,5;UBERON:0002365,1.14e-09,31;UBERON:0002330,1.14e-09,31;UBERON:0003729,1.17e-09,13;UBERON:0004119,2.32e-09,160;UBERON:0000925,2.32e-09,160;UBERON:0006595,2.32e-09,160;UBERON:0001444,9.40e-09,49;UBERON:0007196,1.61e-08,15;UBERON:0001558,1.61e-08,15;UBERON:0010188,1.69e-08,6;UBERON:0002539,1.69e-08,6;UBERON:0008816,1.69e-08,6;UBERON:0001044,1.92e-08,6;UBERON:0003293,1.92e-08,6;UBERON:0003294,1.92e-08,6;UBERON:0010047,1.92e-08,6;UBERON:0000167,1.92e-08,6;UBERON:0004815,3.81e-08,3;UBERON:0002031,3.81e-08,3;UBERON:0000065,1.11e-07,54;UBERON:0005085,1.76e-07,31;UBERON:0003126,4.05e-07,7;UBERON:0001005,4.05e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.90361775633475,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,2.91436230634034,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.818238361772504,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63400684980701,0,0.603173834469785,1.20364978706088,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,2.18376766658517,1.55952606966625,1.70161193135412,2.3250715081117,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,4.01985876597321,1.30012049207304,0,0,0,0,0,0,0,0,0,1.32227932288782,1.72971060628596,2.29702882490251,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,1.34060455107157,4.3556393944529,0.564862804660675,0.43050537267123,1.68471475667626,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27259784006895,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,2.61724931056649,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,1.53366118706464,0.384751292518985,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07791637155815,0.957651272384428,0,0,0,0,0,0.678923115418936,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35434687599266,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0.484426936895553,0,4.6129427695482,0.235939446695481,1.65085738669511,1.27078232765372,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,1.14986184875636,0,0,0,0,0.887023701626388,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,1.86494547746733,1.53646629384555,3.45629830907046,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.435433495793923,0,0.404112318087525,0.860666464712116,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@PAK6 | |||
}} |
Revision as of 23:00, 11 January 2014
Short description: | p8@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560806_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.62e-40 | 42 |
respiratory epithelial cell | 1.29e-30 | 13 |
endodermal cell | 1.22e-27 | 58 |
acinar cell | 4.27e-26 | 5 |
epithelial cell of alimentary canal | 8.92e-24 | 20 |
general ecto-epithelial cell | 5.34e-23 | 14 |
protein secreting cell | 1.01e-21 | 6 |
epithelial cell | 9.78e-20 | 253 |
epithelial cell of Malassez | 1.60e-16 | 3 |
acinar cell of salivary gland | 2.08e-16 | 3 |
duct epithelial cell | 5.59e-16 | 3 |
branched duct epithelial cell | 5.59e-16 | 3 |
tracheal epithelial cell | 5.59e-16 | 3 |
tracheoblast | 5.59e-16 | 3 |
glandular epithelial cell | 2.05e-14 | 9 |
epithelial cell of tracheobronchial tree | 2.29e-14 | 9 |
epithelial cell of lower respiratory tract | 2.29e-14 | 9 |
mammary gland epithelial cell | 1.22e-12 | 4 |
corneal epithelial cell | 1.15e-11 | 2 |
sebum secreting cell | 1.85e-11 | 2 |
epithelial cell of sweat gland | 1.85e-11 | 2 |
epithelial cell of skin gland | 1.85e-11 | 2 |
acinar cell of sebaceous gland | 1.85e-11 | 2 |
squamous epithelial cell | 3.41e-11 | 63 |
embryonic cell | 3.86e-10 | 250 |
ecto-epithelial cell | 9.74e-09 | 34 |
bronchial epithelial cell | 3.81e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.88e-17 | 14 |
skin squamous cell carcinoma | 7.77e-07 | 1 |
keratoacanthoma | 7.77e-07 | 1 |