FFCP PHASE1:Hg19::chr16:2069778..2069797,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283869 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30509 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N729 | |||
|association_with_transcript=257bp_to_ENST00000329610,NM_001099456,uc002coh.3_5end | |||
|coexpression_cluster_id=C3541 | |||
|description=CAGE_peak_1_at_NPW_5end | |||
|id=chr16:2069778..2069797,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.47e-13!180;CL:0002321!6.17e-11!248;CL:0000220!1.57e-10!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.08e-10,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!8.64e-12!143;UBERON:0000490!1.12e-11!138;UBERON:0000119!2.98e-11!312;UBERON:0000483!7.85e-11!309;UBERON:0000475!4.36e-09!365;UBERON:0002100!4.93e-08!216;UBERON:0000481!7.08e-08!347;UBERON:0003914!4.10e-07!118;UBERON:0003104!6.04e-07!238;UBERON:0009142!6.04e-07!238;UBERON:0003929!9.33e-07!54 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,7.03e-12,148;UBERON:0003104,3.84e-11,160;UBERON:0009142,3.84e-11,160;UBERON:0005256,1.20e-09,122;UBERON:0000119,8.55e-09,309;UBERON:0000483,2.08e-08,306;UBERON:0007503,1.80e-07,78 | |||
|phase1_expression=9.99231085988061,3.63970890614671,5.3562673556469,11.0080628188443,2.23480547213644,3.48935409640147,2.53299878168311,8.84407822797563,4.70134130759709,12.7781646980785,4.18680700783456,0.655324116390517,0.527533956456907,20.0501491795276,20.8780346708587,0,0,0.730310090387373,0.487932798790507,3.20114750999649,19.380065668204,1.25381888591235,2.0036519099174,2.87436292653057,2.76193807108566,0.229240217243854,0.738905305049512,0.393553906568396,0,0,0.154816123316076,1.83884244895785,2.71085326900425,2.21852406100073,0,0,30.5344456908241,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,6.60856642895129,4.48406850385229,22.9144153754317,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.70700859703636,12.6583936225095,10.1202962667679,6.51739283826656,20.7130522113978,0,2.43317435151318,5.48301939551594,12.8603050528287,15.1075831392177,3.1434978119451,2.91436230634034,2.22470665670658,1.9472843619281,2.26368658489047,1.72845348674525,0,0,0,3.7764857399674,2.58070378531837,3.47140501607594,1.69592382577203,5.87299210693868,10.1793675517825,2.50793959844173,0.516833518338658,0.35576626268671,1.00416183829401,0.805658634218294,3.80136052859256,2.92874469057803,1.47065232138347,12.9622711661082,3.30408994651095,4.26605807989723,8.33324955576584,4.5994991239765,0.949265659568129,1.83201743930407,0,0,11.7745394078484,1.49091585508596,2.27934920996244,0,9.75244510545967,3.90135220418193,5.60677600142307,3.20246987189115,4.9333509683432,7.78027588499416,1.88594940897563,5.23078089963068,4.54072282934794,9.79499071615998,14.5279287736954,12.4864030732128,2.2818872861778,14.9448680551801,3.64046945795671,3.23745888736263,3.08991774744947,0.816616685019573,3.68502951935304,2.89312187292143,2.37600571456411,1.23633464639278,14.5625817910084,30.181961956282,0.673344455816265,1.62654075833553,1.10825646193673,2.19488810440419,1.5324389789951,1.95309476578576,4.3104229600808,4.12596162084383,4.27114777637135,3.39091041855299,8.70264178644767,4.12210116953756,4.89517026086695,4.65292140828975,2.86919764810153,3.80004320128675,2.52433774244115,2.57739716198438,2.90962902273861,11.3603069605317,3.42557133973977,5.76506013855658,1.73934767846967,4.90943017063502,1.14721838155602,12.6852654374779,4.37348235460901,10.4574548582567,13.164953986952,20.6903097718015,10.9493207722749,1.56449532329816,1.92972281457866,1.38134921352481,0.928735856063958,10.1063127433742,0,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,5.60967095213783,23.8712926572212,41.1624391879517,13.9430538304014,84.5231406342758,33.0842347741586,0,9.71608664490597,15.7842385474644,1.64625428112938,5.62008766288098,1.20634766893957,7.40707561268237,17.9194567920679,5.19967392639789,7.21656710126366,2.55046890945169,12.0930955062896,4.18662698507114,6.48179717607255,4.94660795809955,0,0,0,0,0.297262324577456,2.81201501960331,0.503946384596579,4.82035330624114,0.985143749731331,1.16253575405585,4.60059214998253,1.97065295158377,1.40877494421162,0.207328115540772,0,0.12624243342638,4.508350494744,2.67391897890794,3.51652341630141,5.13217338068116,12.2364716316955,36.0411669412701,2.5724378936752,2.01835951821649,8.7192013766656,4.400297149257,0.904902010304444,67.9547247118577,9.298330278116,6.11657668145202,13.5209667984776,15.4324424557285,14.1849132023278,26.3757957225938,5.86209773998405,9.76718889704597,16.4648067356154,1.95441710576241,4.97548728239564,16.630989331602,0.602878754119172,0,0.399891964728228,0,0,0,7.18874566474748,2.29723871668228,2.85273810081437,2.46128221334885,47.4650305091386,0.895304816199478,0,0,0,0,1.01637849688985,0,1.54657762555539,1.00509759200609,1.91381625495949,0,0,0,42.4512561348224,85.0289885801451,13.0207211375873,2.49565033836969,3.56857977594324,2.52323864054295,1.40569697991256,7.22270639346525,0,9.31257641632544,11.9560607736379,10.1403042697937,6.42938747063813,26.6289574149327,18.8728883095971,0,0,0,0,0,3.32629322662648,1.24053903909388,0,0.841980283299221,3.84417447767103,2.04682899626681,2.41280881715411,8.90508398669946,0.771048469013278,6.39222211127257,1.14978018419333,2.07701771673448,1.27831416305955,39.2793211172772,0.601519410909855,5.43277834721788,6.65923799354719,11.2896524164165,20.9799063935079,1.35359883872224,0.539107359730903,11.7652465376528,7.30696123266303,1.89992932007176,3.4120015221269,3.06168669497728,10.5798798890048,35.4722681187666,24.3851793789468,26.0878682404524,1.52925763827023,0.831076008928724,2.91037181138832,0,0.784306353074702,22.8240611353586,48.8741822092562,48.1560024103169,47.5019063696,0.27470839445503,0.082509499920588,2.87132768998086,3.25030123018261,0,2.22342652071881,14.0184241574326,16.8854042198742,3.72158745708233,6.1229539574916,7.68588477745411,11.2499148189253,11.8412607410161,0.826424576804891,1.72971060628596,1.14851441245126,4.046311234222,3.71876439437829,10.0739950985805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| |||
|short_description=p1@NPW | |||
}} |
Revision as of 01:50, 12 January 2014
Short description: | p1@NPW |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPW_5end |
Coexpression cluster: | C3541_neuroectodermal_carcinoid_osteosarcoma_neuroepithelioma_acute_gastrointestinal_peripheral |
Association with transcript: | 257bp_to_ENST00000329610, NM_001099456, uc002coh.3_5end |
EntrezGene: | NPW |
HGNC: | 30509 |
UniProt: | Q8N729 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.08e-10 | 250 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 7.03e-12 | 148 |
mesenchyme | 3.84e-11 | 160 |
entire embryonic mesenchyme | 3.84e-11 | 160 |
trunk mesenchyme | 1.20e-09 | 122 |
cell layer | 8.55e-09 | 309 |
epithelium | 2.08e-08 | 306 |
epithelial vesicle | 1.80e-07 | 78 |