FFCP PHASE1:Hg19::chr16:14724131..14724142,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5073 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8609 | |||
|TSSclassifier=strong | |||
|UniProt=B3KN69,B4DDG8,B4DWR4,O95453 | |||
|association_with_transcript=-3bp_to_NM_001134477,NM_001242992,NM_002582_5end | |||
|description=CAGE_peak_2_at_PARN_5end | |||
|id=chr16:14724131..14724142,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.60e-12!115;UBERON:0003075!3.42e-08!86;UBERON:0007284!3.42e-08!86;UBERON:0005743!1.82e-07!86;UBERON:0002346!1.85e-07!90;UBERON:0004121!2.42e-07!169;UBERON:0000955!2.86e-07!69;UBERON:0006238!2.86e-07!69;UBERON:0001049!3.51e-07!57;UBERON:0005068!3.51e-07!57;UBERON:0006241!3.51e-07!57;UBERON:0007135!3.51e-07!57;UBERON:0000073!3.54e-07!94;UBERON:0001016!3.54e-07!94;UBERON:0001017!3.69e-07!82;UBERON:0000924!6.73e-07!173;UBERON:0006601!6.73e-07!173;UBERON:0000033!8.55e-07!123;UBERON:0000153!9.32e-07!129;UBERON:0007811!9.32e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.34e-13,114;UBERON:0003075,3.29e-08,82;UBERON:0007284,3.29e-08,82;UBERON:0001017,3.32e-08,81;UBERON:0001016,3.84e-08,89;UBERON:0000955,3.88e-08,68;UBERON:0006238,3.88e-08,68;UBERON:0001049,2.05e-07,56;UBERON:0005068,2.05e-07,56;UBERON:0006241,2.05e-07,56;UBERON:0007135,2.05e-07,56;UBERON:0002346,4.15e-07,86;UBERON:0000073,5.99e-07,53;UBERON:0002616,5.99e-07,53 | |||
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| |||
|short_description=p2@PARN | |||
}} | |||
Revision as of 02:28, 12 January 2014
| Short description: | p2@PARN |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PARN_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -3bp_to_NM_001134477, NM_001242992, NM_002582_5end |
| EntrezGene: | PARN |
| HGNC: | 8609 |
| UniProt: | B3KN69B4DDG8B4DWR4O95453 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 4.34e-13 | 114 |
| neural plate | 3.29e-08 | 82 |
| presumptive neural plate | 3.29e-08 | 82 |
| central nervous system | 3.32e-08 | 81 |
| nervous system | 3.84e-08 | 89 |
| brain | 3.88e-08 | 68 |
| future brain | 3.88e-08 | 68 |
| neural tube | 2.05e-07 | 56 |
| neural rod | 2.05e-07 | 56 |
| future spinal cord | 2.05e-07 | 56 |
| neural keel | 2.05e-07 | 56 |
| neurectoderm | 4.15e-07 | 86 |
| regional part of nervous system | 5.99e-07 | 53 |
| regional part of brain | 5.99e-07 | 53 |
