FFCP PHASE1:Hg19::chr16:68678959..68679004,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |||
|TSSclassifier=strong | |||
|UniProt=F5GZX7 | |||
|association_with_transcript=-199bp_to_ENST00000542274_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_7_at_CDH3_5end | |||
|id=chr16:68678959..68679004,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.16e-14!10;CL:0000541!7.16e-14!10;CL:0000147!1.21e-11!14;CL:0000066!2.26e-11!254;CL:0002077!3.42e-11!33;CL:0002076!7.17e-09!43;CL:0000150!6.21e-08!9;CL:0002567!6.51e-08!3;CL:0000075!9.23e-08!27;CL:0000710!1.33e-07!20;CL:0000325!2.44e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.28e-96;10!CL:0000147;4.55e-69;14!CL:0002567;2.98e-60;3!CL:0000710;2.21e-48;20!CL:0000075;7.54e-36;27!CL:0002077;4.27e-25;34!CL:0002566;2.82e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.28e-96,10;CL:0000541,1.28e-96,10;CL:0000147,4.55e-69,14;CL:0002567,2.98e-60,3;CL:0000710,2.21e-48,20;CL:0000075,7.54e-36,27;CL:0002077,1.83e-28,34;CL:0000333,1.71e-22,41;CL:0002566,2.82e-21,1;CL:0000133,8.17e-16,59;CL:0000221,5.31e-13,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.00e-08;59!UBERON:0003056;7.76e-08;3!CL:0000221;2.40e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.0925884451585296,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0.25248486685276,12.2550935983886,7.63976851116555,28.1321873304113,13.6857956818164,5.14137463516618,15.3174959500398,10.5755780073314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0.77380195455795,0,0.670869375198532,0.0788057072991982,0.157363764404994,0.422401346077626,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0.346576998451015,0,0,0,1.0529445968896,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0.354581522651905,0,0,0,0,0,0,0,1.28657779517981,0,0,0,0,0.414432328326074,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0.218531143927391,0,0,0.26721740526556,0.18378979906969,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.611207220914332,0.813792356631477,0,0,0 | |||
|short_description=p7@CDH3 | |||
}} |
Revision as of 12:01, 20 January 2014
Short description: | p7@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CDH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -199bp_to_ENST00000542274_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | F5GZX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.28e-96 | 10 |
melanoblast | 1.28e-96 | 10 |
pigment cell | 4.55e-69 | 14 |
light melanocyte | 2.98e-60 | 3 |
neurecto-epithelial cell | 2.21e-48 | 20 |
columnar/cuboidal epithelial cell | 7.54e-36 | 27 |
ecto-epithelial cell | 1.83e-28 | 34 |
migratory neural crest cell | 1.71e-22 | 41 |
dark melanocyte | 2.82e-21 | 1 |
neurectodermal cell | 8.17e-16 | 59 |
ectodermal cell | 5.31e-13 | 72 |