FFCP PHASE1:Hg19::chr17:36105074..36105086,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11630 | |||
|TSSclassifier=strong | |||
|UniProt=P35680,Q6FHW6,E0YMJ6 | |||
|association_with_transcript=9bp_to_NM_000458,NM_001165923,uc002hok.3,uc010wdi.1_5end | |||
|description=CAGE_peak_2_at_HNF1B_5end | |||
|id=chr17:36105074..36105086,- | |||
|ontology_enrichment_celltype=CL:1000497!2.61e-19!18;CL:0002518!2.61e-19!18;CL:1000449!3.93e-16!16;CL:0000066!1.74e-14!254;CL:1000507!1.68e-13!12;CL:1000494!1.68e-13!12;CL:0002681!1.08e-11!13;CL:0002584!1.08e-11!13;CL:0000223!2.71e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.15e-27;17!CL:0002518;1.15e-27;17!CL:1000507;9.88e-25;10!CL:1000494;9.88e-25;10!CL:1000449;8.94e-23;15!CL:0002681;5.67e-16;12!CL:0002584;5.67e-16;12!CL:0000239;9.19e-09;3!CL:1000615;9.19e-09;3!CL:0002306;9.19e-09;3!CL:0002231;1.15e-07;3!CL:0000182;6.23e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.46e-28,17;CL:0002518,8.46e-28,17;CL:1000507,7.23e-25,10;CL:1000494,7.23e-25,10;CL:1000449,6.73e-23,15;CL:0000066,1.26e-16,253;CL:0002681,4.56e-16,12;CL:0002584,4.56e-16,12;CL:0000223,2.69e-10,58;CL:0000239,8.63e-09,3;CL:1000615,8.63e-09,3;CL:0002306,8.63e-09,3;CL:0002231,1.58e-07,3;CL:0000182,7.45e-07,12;CL:0002076,7.65e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.50e-14;13!UBERON:0003104;9.79e-11;31!UBERON:0004161;6.06e-10;11!UBERON:0001041;2.55e-09;30!UBERON:0006595;4.38e-07;86 | |||
|ontology_enrichment_disease=DOID:305!7.40e-15!106;DOID:299!1.27e-11!25;DOID:0050687!7.63e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:299;2.85e-12;25!DOID:4468;7.95e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.19e-13,106;DOID:299,2.68e-12,25;DOID:0050687,9.90e-09,143;DOID:4468,9.01e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006554!3.82e-27!44;UBERON:0001008!2.56e-26!45;UBERON:0005172!2.09e-24!55;UBERON:0005173!2.09e-24!55;UBERON:0000058!1.10e-22!26;UBERON:0002113!3.97e-21!27;UBERON:0003918!3.97e-21!27;UBERON:0005095!3.97e-21!27;UBERON:0007687!3.97e-21!27;UBERON:0002417!5.88e-21!61;UBERON:0000916!5.88e-21!61;UBERON:0000080!5.92e-19!18;UBERON:0002120!5.92e-19!18;UBERON:0004875!5.92e-19!18;UBERON:0005721!5.92e-19!18;UBERON:0005754!5.92e-19!18;UBERON:0007297!5.92e-19!18;UBERON:0000489!1.32e-18!32;UBERON:0004119!1.99e-18!169;UBERON:0000925!1.99e-18!169;UBERON:0006595!1.99e-18!169;UBERON:0004921!4.80e-18!129;UBERON:0004185!4.80e-18!129;UBERON:0003887!1.25e-17!21;UBERON:0006555!1.43e-17!17;UBERON:0005103!1.43e-17!17;UBERON:0000083!1.43e-17!17;UBERON:0009201!1.43e-17!17;UBERON:0004819!1.43e-17!17;UBERON:0006553!1.43e-17!17;UBERON:0003074!1.43e-17!17;UBERON:0003060!1.43e-17!17;UBERON:0004876!1.36e-16!20;UBERON:0003064!1.83e-16!37;UBERON:0005177!2.29e-16!107;UBERON:0004211!3.93e-16!16;UBERON:0001285!3.93e-16!16;UBERON:0007684!3.93e-16!16;UBERON:0003220!3.93e-16!16;UBERON:0004208!3.93e-16!16;UBERON:0000466!3.08e-15!126;UBERON:0001007!5.30e-15!155;UBERON:0001555!5.30e-15!155;UBERON:0007026!5.30e-15!155;UBERON:0000077!8.02e-14!130;UBERON:0003104!1.12e-13!238;UBERON:0009142!1.12e-13!238;UBERON:0009773!1.68e-13!12;UBERON:0001231!1.68e-13!12;UBERON:0004810!1.68e-13!12;UBERON:0005911!1.48e-12!82;UBERON:0001737!1.79e-12!9;UBERON:0003886!2.25e-12!63;UBERON:0009569!4.10e-12!113;UBERON:0001225!1.08e-11!13;UBERON:0008987!1.08e-11!13;UBERON:0009497!1.33e-11!25;UBERON:0000015!1.33e-11!25;UBERON:0002423!1.33e-11!25;UBERON:0006235!1.33e-11!25;UBERON:0004161!1.33e-11!25;UBERON:0009856!6.81e-11!26;UBERON:0002553!2.34e-10!70;UBERON:0007499!4.33e-10!25;UBERON:0003929!5.38e-10!54;UBERON:0001041!1.40e-09!98;UBERON:0009854!1.73e-09!23;UBERON:0005409!2.80e-09!35;UBERON:0000464!4.25e-09!104;UBERON:0001851!5.04e-09!16;UBERON:0008835!1.08e-08!22;UBERON:0003894!1.08e-08!22;UBERON:0002294!1.67e-08!7;UBERON:0001173!1.67e-08!7;UBERON:0004912!1.67e-08!7;UBERON:0000353!2.39e-08!17;UBERON:0003101!9.08e-08!22;UBERON:0000079!9.08e-08!22;UBERON:0000481!1.60e-07!347;UBERON:0002100!2.39e-07!216;UBERON:0000160!3.22e-07!27;UBERON:0005256!8.01e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.54e-27;30!UBERON:0001008;3.54e-27;30!UBERON:0004211;9.88e-25;10!UBERON:0009773;9.88e-25;10!UBERON:0001231;9.88e-25;10!UBERON:0004810;9.88e-25;10!UBERON:0002113;1.82e-24;24!UBERON:0011143;1.82e-24;24!UBERON:0006555;8.94e-23;15!UBERON:0004819;8.94e-23;15!UBERON:0001285;8.94e-23;15!UBERON:0007684;8.94e-23;15!UBERON:0000489;1.72e-19;29!UBERON:0005172;3.57e-17;52!UBERON:0005173;3.57e-17;52!UBERON:0001225;5.67e-16;12!UBERON:0008987;5.67e-16;12!UBERON:0002423;3.04e-14;25!UBERON:0005409;1.06e-13;22!UBERON:0001851;2.09e-12;15!UBERON:0000353;2.09e-12;15!UBERON:0000058;2.55e-12;10!UBERON:0002417;5.65e-12;58!UBERON:0000916;5.65e-12;58!UBERON:0000160;4.60e-10;17!UBERON:0002294;2.64e-09;7!UBERON:0001173;2.64e-09;7!UBERON:0006853;9.19e-09;3!UBERON:0007685;9.19e-09;3!UBERON:0004134;9.19e-09;3!UBERON:0006947;9.19e-09;3!UBERON:0004054;9.19e-09;3!UBERON:0002108;1.09e-08;4!UBERON:0004921;8.75e-08;33!UBERON:0005177;1.27e-07;99!UBERON:0002107;3.93e-07;19!UBERON:0006925;3.93e-07;19!UBERON:0002394;6.17e-07;4!UBERON:0003928;6.17e-07;4!UBERON:0003937;9.27e-07;12!UBERON:0005399;9.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,2.22e-30,47;UBERON:0005172,7.16e-30,54;UBERON:0005173,7.16e-30,54;UBERON:0001008,1.37e-29,48;UBERON:0002113,1.61e-28,26;UBERON:0003918,1.61e-28,26;UBERON:0011143,1.61e-28,26;UBERON:0005095,1.61e-28,26;UBERON:0007687,1.61e-28,26;UBERON:0002417,4.41e-26,60;UBERON:0000916,4.41e-26,60;UBERON:0006555,4.09e-25,16;UBERON:0004819,4.09e-25,16;UBERON:0004810,7.23e-25,10;UBERON:0000489,4.24e-23,31;UBERON:0004211,6.73e-23,15;UBERON:0009773,6.73e-23,15;UBERON:0001231,6.73e-23,15;UBERON:0001285,6.73e-23,15;UBERON:0007684,6.73e-23,15;UBERON:0004208,6.73e-23,15;UBERON:0005177,5.01e-20,101;UBERON:0004921,9.98e-19,118;UBERON:0004119,2.01e-18,160;UBERON:0000925,2.01e-18,160;UBERON:0006595,2.01e-18,160;UBERON:0005911,2.46e-16,82;UBERON:0001225,4.56e-16,12;UBERON:0008987,4.56e-16,12;UBERON:0009569,7.97e-16,112;UBERON:0001007,1.66e-15,145;UBERON:0001555,1.66e-15,145;UBERON:0007026,1.66e-15,145;UBERON:0000058,2.22e-14,19;UBERON:0009497,3.05e-14,25;UBERON:0000015,3.05e-14,25;UBERON:0002423,3.05e-14,25;UBERON:0006235,3.05e-14,25;UBERON:0004161,3.05e-14,25;UBERON:0007499,3.93e-14,25;UBERON:0009856,1.81e-13,26;UBERON:0003929,2.81e-13,54;UBERON:0001851,1.76e-12,15;UBERON:0000353,1.76e-12,15;UBERON:0003104,5.43e-12,160;UBERON:0009142,5.43e-12,160;UBERON:0008835,7.03e-12,22;UBERON:0003894,7.03e-12,22;UBERON:0005409,7.66e-12,25;UBERON:0002100,1.52e-11,199;UBERON:0009854,2.96e-11,23;UBERON:0001041,3.44e-10,87;UBERON:0000160,4.64e-10,17;UBERON:0003914,1.14e-09,117;UBERON:0000080,1.21e-09,9;UBERON:0002120,1.21e-09,9;UBERON:0004875,1.21e-09,9;UBERON:0005721,1.21e-09,9;UBERON:0005754,1.21e-09,9;UBERON:0007297,1.21e-09,9;UBERON:0006853,8.63e-09,3;UBERON:0007685,8.63e-09,3;UBERON:0004134,8.63e-09,3;UBERON:0006947,9.58e-09,3;UBERON:0004054,9.58e-09,3;UBERON:0002108,1.41e-08,4;UBERON:0003064,2.52e-08,28;UBERON:0003103,5.52e-08,68;UBERON:0005103,9.08e-08,8;UBERON:0000083,9.08e-08,8;UBERON:0009201,9.08e-08,8;UBERON:0006553,9.08e-08,8;UBERON:0003074,9.08e-08,8;UBERON:0003060,9.08e-08,8;UBERON:0004876,9.34e-08,11;UBERON:0002294,3.73e-07,9;UBERON:0001173,3.73e-07,9;UBERON:0004912,3.73e-07,9;UBERON:0002107,4.03e-07,19;UBERON:0006925,4.03e-07,19;UBERON:0008836,4.03e-07,19;UBERON:0003887,4.77e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,5.58240934377942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49513948857586,4.67973359864691,7.39881344348585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0,0,0.328875809207352,0.829050053357545,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.464775771478074,0.207322110030741,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0,0,1.77460200059766,0.842923450390509,1.68707720918437,1.10293972732394,0.871517776369625,1.89816495288877,0.539325232640658,0.392442930250692,2.30848294167834,0,0,0.4115740113314,0,0,3.9313088667105,4.13552934676983,0,3.93563003337963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,1.20303882181971,1.47329582297434,0,0,0,4.51199612907412,2.31046011313244,10.1965469992991,4.38417673959782,2.63879072232189,0,0,0.647747748306418,1.54227252690289,1.89662506280697,2.50844886927427,5.09752546090077,3.3243040357149,2.68649705666614,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,2.14870389969272,1.53752053892085,0.638063562472921,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,5.16606447205476,0,2.66058092122005,3.90529780351831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,3.56945935837101,0,4.31368085507169,6.26574111364632,0,0.789147245095469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.01792645206503,4.24405301213784,2.12029607150911,0,3.98104772431402,2.91909962861019,2.4441205797345,0,0,0,0,0,0,0,0,0,5.12959723704208,4.83962864194656,0,0.063186579628488,0,0.311064574191741,0,0,0,0,1.99226682220855,0,0,0,0,3.31980669659857,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.320635281006135,2.13452994739353,0,4.7549837660855,0,0,1.1524383839052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6544468284517,1.07140615895516,1.3480708770837,3.44496185301621,0.169346664131569,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,2.12775409707835,3.14727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,2.65013777824443,0,0,2.22412889249628,0,1.9221734262185,3.77290332239198,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86858885317099,0,0,0,0.389720617678777,0,0.981392365535065,0,0.245772908753719,1.47918486351039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,4.68908406739856,0,0,3.99211432786022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0,0,0,4.25497827182286,0.667388411352415,1.02041020705668,0,0,0.913158720509496,4.53447941559105,14.8103023244986,0,0,0,0,0,0,0,0,0,0,0,2.54032230114557,0,0.62041277132864,1.91107787795487,2.01339777236026,3.4352581765335,5.85206039914893,0,0,0,0,0,0,0,0,0,0,3.16414048242573,3.27839340755936,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0,0.320965466756673,2.92134555298607,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0.101988829741982,0,0,0.752122617877125,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718601616852695,0,0.122241444182866,0.813792356631477,0,0,0.320568492303233 | |||
|short_description=p2@HNF1B | |||
}} |
Revision as of 14:52, 20 January 2014
Short description: | p2@HNF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNF1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_000458, NM_001165923, uc002hok.3, uc010wdi.1_5end |
EntrezGene: | HNF1B |
HGNC: | 11630 |
UniProt: | P35680Q6FHW6E0YMJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.46e-28 | 17 |
kidney epithelial cell | 8.46e-28 | 17 |
kidney tubule cell | 7.23e-25 | 10 |
nephron tubule epithelial cell | 7.23e-25 | 10 |
epithelial cell of nephron | 6.73e-23 | 15 |
epithelial cell | 1.26e-16 | 253 |
kidney cortical cell | 4.56e-16 | 12 |
renal cortical epithelial cell | 4.56e-16 | 12 |
endodermal cell | 2.69e-10 | 58 |
brush border epithelial cell | 8.63e-09 | 3 |
kidney cortex tubule cell | 8.63e-09 | 3 |
epithelial cell of proximal tubule | 8.63e-09 | 3 |
epithelial cell of prostate | 1.58e-07 | 3 |
hepatocyte | 7.45e-07 | 12 |
endo-epithelial cell | 7.65e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.19e-13 | 106 |
adenocarcinoma | 2.68e-12 | 25 |