FFCP PHASE1:Hg19::chr17:38256932..38256965,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9572 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7962 | |||
|TSSclassifier=strong | |||
|UniProt=F1D8S3,P20393 | |||
|association_with_transcript=7bp_to_NM_021724,uc002htz.1,uc010cwq.1_5end | |||
|description=CAGE_peak_4_at_NR1D1_5end | |||
|id=chr17:38256932..38256965,- | |||
|ontology_enrichment_celltype=CL:0000838!3.07e-07!52;CL:0000791!5.87e-07!18;CL:0000789!5.87e-07!18;CL:0002420!5.87e-07!18;CL:0002419!5.87e-07!18;CL:0000790!5.87e-07!18;CL:0000542!7.21e-07!53;CL:0000051!7.21e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.56e-08;18!CL:0000789;7.56e-08;18!CL:0002419;7.56e-08;18!CL:0000084;7.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.11e-08,18;CL:0000789,8.11e-08,18;CL:0002420,8.11e-08,18;CL:0002419,8.11e-08,18;CL:0000790,8.11e-08,18;CL:0000838,2.04e-07,52;CL:0000542,5.38e-07,53;CL:0000051,5.38e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;7.56e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.55e-19!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.59e-19,114 | |||
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| |||
|short_description=p4@NR1D1 | |||
}} |
Revision as of 15:05, 20 January 2014
Short description: | p4@NR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NR1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_NM_021724, uc002htz.1, uc010cwq.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | F1D8S3P20393 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.11e-08 | 18 |
alpha-beta T cell | 8.11e-08 | 18 |
immature T cell | 8.11e-08 | 18 |
mature T cell | 8.11e-08 | 18 |
immature alpha-beta T cell | 8.11e-08 | 18 |
lymphoid lineage restricted progenitor cell | 2.04e-07 | 52 |
lymphocyte | 5.38e-07 | 53 |
common lymphoid progenitor | 5.38e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.59e-19 | 114 |