FFCP PHASE1:Hg19::chr17:42984179..42984190,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=4235 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-308bp_to_U92979_5end | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_34_at_GFAP_5end | |||
|id=chr17:42984179..42984190,- | |||
|ontology_enrichment_celltype=CL:0002605!1.12e-12!3;CL:0000128!3.67e-09!7;CL:0000126!3.67e-09!7;CL:0000127!3.67e-09!7;CL:0002453!3.67e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.58e-22;3!CL:0000128;6.81e-10;7!CL:0000126;6.81e-10;7!CL:0000127;6.81e-10;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.89e-22,3;CL:0000128,8.08e-10,7;CL:0000126,8.08e-10,7;CL:0000127,8.08e-10,7;CL:0002453,8.08e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.67e-11;3!UBERON:0003057;2.67e-11;3!UBERON:0006601;4.56e-11;82!UBERON:0006222;5.70e-09;1!UBERON:0005425;1.37e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p34@GFAP | |||
}} |
Revision as of 15:44, 20 January 2014
Short description: | p34@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_GFAP_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -308bp_to_U92979_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.89e-22 | 3 |
oligodendrocyte | 8.08e-10 | 7 |
macroglial cell | 8.08e-10 | 7 |
astrocyte | 8.08e-10 | 7 |
oligodendrocyte precursor cell | 8.08e-10 | 7 |