FFCP PHASE1:Hg19::chr17:47817223..47817245,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C654 | |||
|description=CAGE_peak_at_chr17:47817223..47817245,+ | |||
|id=chr17:47817223..47817245,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.82e-55!172;CL:0000566!5.82e-55!172;CL:0000738!8.80e-54!140;CL:0000988!4.19e-52!182;CL:0002032!1.31e-49!165;CL:0000837!1.31e-49!165;CL:0002087!1.03e-37!119;CL:0002031!3.31e-35!124;CL:0000542!1.12e-24!53;CL:0000051!1.12e-24!53;CL:0000763!5.86e-24!112;CL:0000049!5.86e-24!112;CL:0000838!1.22e-23!52;CL:0000766!1.24e-21!76;CL:0000791!1.72e-21!18;CL:0000789!1.72e-21!18;CL:0002420!1.72e-21!18;CL:0002419!1.72e-21!18;CL:0000790!1.72e-21!18;CL:0002057!3.89e-19!42;CL:0000860!2.22e-17!45;CL:0000084!1.91e-16!25;CL:0000827!1.91e-16!25;CL:0000094!4.94e-16!8;CL:0000134!4.99e-16!358;CL:0002320!2.67e-15!365;CL:0000557!1.81e-14!71;CL:0000219!9.31e-13!390;CL:0000624!9.33e-13!6;CL:0000839!1.87e-12!70;CL:0002009!9.81e-12!65;CL:0000236!1.86e-11!14;CL:0002194!2.85e-11!63;CL:0000576!2.85e-11!63;CL:0000040!2.85e-11!63;CL:0000559!2.85e-11!63;CL:0000081!3.83e-11!11;CL:0000625!4.08e-10!11;CL:0000048!8.93e-10!430;CL:0000034!2.32e-09!444;CL:0000723!2.33e-09!436;CL:0002393!4.07e-09!9;CL:0002397!4.07e-09!9;CL:0000623!1.80e-07!3;CL:0000825!1.80e-07!3;CL:0000775!2.25e-07!3;CL:0000898!3.85e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;6.14e-30;6!CL:0000791;2.42e-26;18!CL:0000789;2.42e-26;18!CL:0002419;2.42e-26;18!CL:0000094;7.44e-23;8!CL:0000084;3.32e-22;25!CL:0000623;1.31e-16;3!CL:0000081;1.85e-16;11!CL:0000775;2.61e-16;3!CL:0000898;1.37e-15;3!CL:0000542;8.65e-15;53!CL:0000771;1.44e-11;2!CL:0000815;8.02e-11;2!CL:0000792;8.02e-11;2!CL:0002677;8.02e-11;2!CL:0002393;1.01e-07;6!CL:0002397;1.01e-07;6!CL:0000625;1.38e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.92e-30,6;CL:0000791,1.98e-26,18;CL:0000789,1.98e-26,18;CL:0002420,1.98e-26,18;CL:0002419,1.98e-26,18;CL:0000790,1.98e-26,18;CL:0000738,2.07e-24,136;CL:0000838,4.39e-24,52;CL:0000542,1.48e-23,53;CL:0000051,1.48e-23,53;CL:0000094,6.92e-23,8;CL:0000084,2.48e-22,25;CL:0000827,2.48e-22,25;CL:0000037,9.29e-22,168;CL:0000988,2.55e-20,177;CL:0002032,1.37e-19,161;CL:0000837,1.37e-19,161;CL:0000623,1.24e-16,3;CL:0000825,1.24e-16,3;CL:0000081,1.76e-16,11;CL:0000775,2.18e-16,3;CL:0000898,8.57e-16,3;CL:0002087,1.08e-15,115;CL:0002031,2.70e-13,120;CL:0000771,1.55e-11,2;CL:0000815,5.53e-11,2;CL:0000792,5.53e-11,2;CL:0002677,5.53e-11,2;CL:0000625,1.42e-07,11;CL:0000134,7.07e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;2.42e-26;18!CL:0000051;8.65e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.07e-21!102;UBERON:0003061!2.07e-21!102;UBERON:0002193!2.08e-19!112;UBERON:0002384!2.60e-14!375;UBERON:0002371!6.20e-12!80;UBERON:0001474!1.48e-10!86;UBERON:0002405!6.44e-10!115;UBERON:0000178!2.97e-08!15;UBERON:0000179!2.97e-08!15;UBERON:0000463!2.97e-08!15;UBERON:0004765!7.01e-08!101;UBERON:0001434!7.01e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,2.68680578668049,0.619264493264304,0,0,0,0,0,0,1.10799081706375,1.60435557976113,2.38711957787437,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0.598390972864896,0.852449501065388,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0,0.422510572623884,0.637812899895131,0.209658645508376,0.336985893439485,1.05123824989054,0.48217676009124,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,1.14950487990897,0.661044872784862,0.954053754535364,1.1384259382189,0,0.764546456250458,0,1.12101712596307,0,3.14735632182133,6.6811829667358,5.14003747498773,2.50779743086017,1.95553359980154,0.946895611469467,0,0.891283655081389,4.41908861212256,2.87994062958707,2.70803863765016,1.0247305578054,0.780356085359269,0,0.276350017785848,0.289803085735052,0.444859689486181,0,1.04535523804977,0.339928028092699,4.59864592322305,3.77990190030893,4.04831507231205,0.637130828648193,0,0,0.301150238155546,0.255973222308837,2.49861453104692,0.473554504088034,0,4.43534835094411,6.68600489458768,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,6.69904584686553,13.8001647910091,8.59898343074314,0,0,0,0,0,8.98808428736619,2.99161459204025,14.0901274568252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,3.01999881146064,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0.321176150207399,1.41259795033733,0.425846237690326,0,0,0.447352215784832,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0,0,1.78309414843965,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:47817223..47817245,+ | |||
}} |
Revision as of 16:07, 20 January 2014
Short description: | p@chr17:47817223..47817245, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:47817223..47817245, + |
Coexpression cluster: | C654_Eosinophils_Neutrophils_Natural_CD8_CD4_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.92e-30 | 6 |
mature alpha-beta T cell | 1.98e-26 | 18 |
alpha-beta T cell | 1.98e-26 | 18 |
immature T cell | 1.98e-26 | 18 |
mature T cell | 1.98e-26 | 18 |
immature alpha-beta T cell | 1.98e-26 | 18 |
leukocyte | 2.07e-24 | 136 |
lymphoid lineage restricted progenitor cell | 4.39e-24 | 52 |
lymphocyte | 1.48e-23 | 53 |
common lymphoid progenitor | 1.48e-23 | 53 |
granulocyte | 6.92e-23 | 8 |
T cell | 2.48e-22 | 25 |
pro-T cell | 2.48e-22 | 25 |
hematopoietic stem cell | 9.29e-22 | 168 |
hematopoietic cell | 2.55e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.37e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.37e-19 | 161 |
natural killer cell | 1.24e-16 | 3 |
pro-NK cell | 1.24e-16 | 3 |
blood cell | 1.76e-16 | 11 |
neutrophil | 2.18e-16 | 3 |
naive T cell | 8.57e-16 | 3 |
nongranular leukocyte | 1.08e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.70e-13 | 120 |
eosinophil | 1.55e-11 | 2 |
regulatory T cell | 5.53e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.53e-11 | 2 |
naive regulatory T cell | 5.53e-11 | 2 |
CD8-positive, alpha-beta T cell | 1.42e-07 | 11 |
mesenchymal cell | 7.07e-07 | 354 |