FFCP PHASE1:Hg19::chr17:80085772..80085810,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C921 | |||
|description=CAGE_peak_at_chr17:80085772..80085810,- | |||
|id=chr17:80085772..80085810,- | |||
|ontology_enrichment_celltype=CL:0000084!1.64e-36!25;CL:0000827!1.64e-36!25;CL:0000791!1.28e-34!18;CL:0000789!1.28e-34!18;CL:0002420!1.28e-34!18;CL:0002419!1.28e-34!18;CL:0000790!1.28e-34!18;CL:0000625!9.94e-25!11;CL:0000838!4.44e-21!52;CL:0000542!1.55e-20!53;CL:0000051!1.55e-20!53;CL:0002087!1.49e-18!119;CL:0000738!4.32e-17!140;CL:0002031!6.94e-15!124;CL:0000624!7.57e-14!6;CL:0000037!8.95e-12!172;CL:0000566!8.95e-12!172;CL:0000988!2.96e-11!182;CL:0002032!1.92e-09!165;CL:0000837!1.92e-09!165;CL:0000842!7.53e-08!3;CL:0000623!1.90e-07!3;CL:0000825!1.90e-07!3;CL:0000898!1.98e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.76e-71;25!CL:0000791;2.02e-71;18!CL:0000789;2.02e-71;18!CL:0002419;2.02e-71;18!CL:0000625;6.84e-56;11!CL:0000624;6.28e-22;6!CL:0000542;2.49e-20;53!CL:0000226;3.60e-16;3!CL:0000842;3.60e-16;3!CL:0002087;4.57e-08;104!CL:0000898;7.51e-08;3!CL:0000623;1.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.48e-71,25;CL:0000827,1.48e-71,25;CL:0000791,2.17e-71,18;CL:0000789,2.17e-71,18;CL:0002420,2.17e-71,18;CL:0002419,2.17e-71,18;CL:0000790,2.17e-71,18;CL:0000625,7.82e-56,11;CL:0000838,1.45e-39,52;CL:0000542,9.95e-39,53;CL:0000051,9.95e-39,53;CL:0002087,1.44e-24,115;CL:0000624,6.02e-22,6;CL:0000738,6.27e-20,136;CL:0002031,1.48e-17,120;CL:0000226,3.16e-16,3;CL:0000842,3.16e-16,3;CL:0000037,4.41e-15,168;CL:0000988,4.93e-14,177;CL:0002032,7.80e-12,161;CL:0000837,7.80e-12,161;CL:0000898,7.65e-08,3;CL:0000623,1.41e-07,3;CL:0000825,1.41e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.02e-71;18!CL:0000051;2.49e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.28e-16!15;UBERON:0000179!6.28e-16!15;UBERON:0000463!6.28e-16!15;UBERON:0002193!1.22e-09!112;UBERON:0002390!1.13e-08!102;UBERON:0003061!1.13e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.39e-12;2!UBERON:0005058;4.39e-12;2!UBERON:0009113;4.39e-12;2!UBERON:0000178;8.54e-12;15!UBERON:0000179;8.54e-12;15!UBERON:0000463;8.54e-12;15!UBERON:0002390;3.77e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.74e-13,4;UBERON:0005058,6.74e-13,4;UBERON:0009113,6.74e-13,4;UBERON:0003295,6.74e-13,4;UBERON:0005562,6.74e-13,4;UBERON:0000178,9.90e-12,15;UBERON:0000179,9.90e-12,15;UBERON:0000463,9.90e-12,15;UBERON:0003351,9.57e-09,6;UBERON:0004177,1.49e-07,7;UBERON:0005057,1.49e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.601633342410425,1.30206522429511,0,0.32389366601898,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,1.27867425159808,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,4.91774425284583,9.43225830597995,5.96244347098577,0.167186495390678,2.28145586643513,1.4203434172042,0,0.222820913770347,0.294605907474837,0,0,0,0,0,0,0,13.7906503740716,14.9822863730239,13.589618094647,0.113309342697566,4.98186641682498,3.4362744548263,0.506039384039006,3.50421955756506,7.81300144627702,5.70271226669025,3.46322773878877,5.24745105733115,2.49861453104692,3.07810427657222,6.56902397536837,5.64498881029251,2.40696176205157,15.7858600232251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77327684181734,0.862510299438069,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,3.66714141391649,4.16237475433433,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.714695326373367,1.23408681925858,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,1.42283686696828,1.4348364545594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,1.48849806543585,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0.913158720509496,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.580120991762195,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,16.8577054671976,7.94556342986981,0,0,0.202117188958219,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,1.40891655513718,0 | |||
|short_description=p@chr17:80085772..80085810,- | |||
}} |
Revision as of 18:07, 20 January 2014
Short description: | p@chr17:80085772..80085810, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80085772..80085810, - |
Coexpression cluster: | C921_chronic_thymus_CD4_acute_CD8_Hodgkin_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.48e-71 | 25 |
pro-T cell | 1.48e-71 | 25 |
mature alpha-beta T cell | 2.17e-71 | 18 |
alpha-beta T cell | 2.17e-71 | 18 |
immature T cell | 2.17e-71 | 18 |
mature T cell | 2.17e-71 | 18 |
immature alpha-beta T cell | 2.17e-71 | 18 |
CD8-positive, alpha-beta T cell | 7.82e-56 | 11 |
lymphoid lineage restricted progenitor cell | 1.45e-39 | 52 |
lymphocyte | 9.95e-39 | 53 |
common lymphoid progenitor | 9.95e-39 | 53 |
nongranular leukocyte | 1.44e-24 | 115 |
CD4-positive, alpha-beta T cell | 6.02e-22 | 6 |
leukocyte | 6.27e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 1.48e-17 | 120 |
single nucleate cell | 3.16e-16 | 3 |
mononuclear cell | 3.16e-16 | 3 |
hematopoietic stem cell | 4.41e-15 | 168 |
hematopoietic cell | 4.93e-14 | 177 |
hematopoietic oligopotent progenitor cell | 7.80e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.80e-12 | 161 |
naive T cell | 7.65e-08 | 3 |
natural killer cell | 1.41e-07 | 3 |
pro-NK cell | 1.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.74e-13 | 4 |
hemolymphoid system gland | 6.74e-13 | 4 |
thymic region | 6.74e-13 | 4 |
pharyngeal gland | 6.74e-13 | 4 |
thymus primordium | 6.74e-13 | 4 |
blood | 9.90e-12 | 15 |
haemolymphatic fluid | 9.90e-12 | 15 |
organism substance | 9.90e-12 | 15 |
pharyngeal epithelium | 9.57e-09 | 6 |
hemopoietic organ | 1.49e-07 | 7 |
immune organ | 1.49e-07 | 7 |