FFCP PHASE1:Hg19::chr18:907515..907538,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1806 | |||
|description=CAGE_peak_at_chr18:907515..907538,+ | |||
|id=chr18:907515..907538,+ | |||
|ontology_enrichment_celltype=CL:0000077!9.64e-19!19;CL:0000163!4.89e-13!9;CL:0002274!4.87e-12!5;CL:0000457!4.87e-12!5;CL:0002191!4.87e-12!5;CL:0000097!4.87e-12!5;CL:0000831!4.87e-12!5;CL:0002028!4.87e-12!5;CL:0002603!8.16e-09!3;CL:0000242!7.47e-07!2;CL:0002097!9.59e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.76e-18;2!CL:0000242;3.76e-18;2!CL:0000077;3.35e-16;19!CL:0002603;2.00e-12;3!CL:0000333;4.30e-08;5!CL:0000312;8.32e-08;5!CL:0002319;8.36e-08;25!CL:0000095;1.95e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.90e-18,2;CL:0000077,2.85e-16,19;CL:0002603,2.25e-12,3;CL:0000076,7.04e-08,63;CL:0000312,7.51e-08,5;CL:0002319,8.36e-08,25;CL:0000095,1.91e-07,17;CL:0000123,1.91e-07,17;CL:0000333,7.52e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;7.05e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.65e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.76e-23!94;UBERON:0001016!3.76e-23!94;UBERON:0005743!1.03e-22!86;UBERON:0001049!1.16e-22!57;UBERON:0005068!1.16e-22!57;UBERON:0006241!1.16e-22!57;UBERON:0007135!1.16e-22!57;UBERON:0003075!1.64e-21!86;UBERON:0007284!1.64e-21!86;UBERON:0002346!3.47e-20!90;UBERON:0002616!1.13e-19!59;UBERON:0001017!2.33e-19!82;UBERON:0002619!6.99e-16!22;UBERON:0001869!9.70e-16!32;UBERON:0000955!1.34e-15!69;UBERON:0006238!1.34e-15!69;UBERON:0001950!5.02e-15!20;UBERON:0002780!7.33e-15!41;UBERON:0001890!7.33e-15!41;UBERON:0006240!7.33e-15!41;UBERON:0001893!1.30e-14!34;UBERON:0002020!1.68e-14!34;UBERON:0003528!1.68e-14!34;UBERON:0003080!2.07e-14!42;UBERON:0000956!1.09e-13!25;UBERON:0000203!1.09e-13!25;UBERON:0002791!3.65e-13!33;UBERON:0004121!9.82e-13!169;UBERON:0003056!2.20e-12!61;UBERON:0000924!3.19e-12!173;UBERON:0006601!3.19e-12!173;UBERON:0003076!6.75e-10!15;UBERON:0003057!6.75e-10!15;UBERON:0002680!7.19e-10!9;UBERON:0001895!7.19e-10!9;UBERON:0010092!7.19e-10!9;UBERON:0004733!1.19e-09!12;UBERON:0002028!1.19e-09!12;UBERON:0007277!1.19e-09!12;UBERON:0000153!2.19e-09!129;UBERON:0007811!2.19e-09!129;UBERON:0000033!2.43e-09!123;UBERON:0004732!7.95e-09!13;UBERON:0001872!2.68e-08!5;UBERON:0002037!2.75e-07!6;UBERON:0006215!2.75e-07!6;UBERON:0007023!3.91e-07!115;UBERON:0000200!9.40e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.30e-08;5!UBERON:0002410;4.30e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.01e-08,5;UBERON:0002410,4.01e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10808952269109,0.204000691244253,2.82109249330279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,1.74306691720059,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,1.17261385734044,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2036942729334,7.1848573715814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,1.09692698576986,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0.0801588202515337,0,0,0,0,2.23073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95282444544246,0,0,0.272406812223151,0,0,0,0,0,0.728994679896296,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.310482014706917,0,0,0,0,0,1.87333962322753,2.60857851499485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,7.29101410674747,7.56883446699114,2.94717703165954,0.463044948647668,0,0,0.308801447160972,9.86778223104182,0,0.964570191354574,1.52048196587765,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62735233736067,7.87121123195777,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.615349092722265,0,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.253663240775627,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.475788130837822,0.197318320688547,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,3.9769708788558,0,0,0,0,5.58562521196692,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,1.07185652062471,0,0.103432995861895,0,0,0,0.124149428591716,0.33639558774184,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:907515..907538,+ | |||
}} |
Revision as of 18:17, 20 January 2014
Short description: | p@chr18:907515..907538, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:907515..907538, + |
Coexpression cluster: | C1806_acute_mesothelioma_small_neuroblastoma_Astrocyte_hepatoma_gastrointestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.90e-18 | 2 |
mesothelial cell | 2.85e-16 | 19 |
astrocyte of the cerebellum | 2.25e-12 | 3 |
squamous epithelial cell | 7.04e-08 | 63 |
keratinocyte | 7.51e-08 | 5 |
neural cell | 8.36e-08 | 25 |
neuron associated cell | 1.91e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.91e-07 | 17 |
migratory neural crest cell | 7.52e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.01e-08 | 5 |
autonomic nervous system | 4.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.65e-07 | 6 |