FFCP PHASE1:Hg19::chr18:49866423..49866424,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2701 | |||
|TSSclassifier=strong | |||
|UniProt=P43146,Q49AK4 | |||
|association_with_transcript=-117bp_to_NM_005215_5end | |||
|description=CAGE_peak_19_at_DCC_5end | |||
|id=chr18:49866423..49866424,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.96e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.32e-46!57;UBERON:0005068!4.32e-46!57;UBERON:0006241!4.32e-46!57;UBERON:0007135!4.32e-46!57;UBERON:0002780!6.77e-44!41;UBERON:0001890!6.77e-44!41;UBERON:0006240!6.77e-44!41;UBERON:0003080!8.85e-43!42;UBERON:0002616!2.98e-40!59;UBERON:0002346!1.47e-39!90;UBERON:0001017!1.50e-39!82;UBERON:0005743!1.65e-37!86;UBERON:0001893!3.63e-37!34;UBERON:0000955!1.52e-36!69;UBERON:0006238!1.52e-36!69;UBERON:0000073!2.15e-36!94;UBERON:0001016!2.15e-36!94;UBERON:0002791!1.07e-33!33;UBERON:0002020!7.39e-33!34;UBERON:0003528!7.39e-33!34;UBERON:0003075!6.10e-32!86;UBERON:0007284!6.10e-32!86;UBERON:0001869!3.01e-30!32;UBERON:0003056!2.09e-28!61;UBERON:0007023!4.65e-25!115;UBERON:0000924!8.06e-23!173;UBERON:0006601!8.06e-23!173;UBERON:0002619!1.00e-22!22;UBERON:0000033!1.35e-20!123;UBERON:0001950!3.50e-20!20;UBERON:0000956!6.80e-20!25;UBERON:0000203!6.80e-20!25;UBERON:0000153!2.02e-19!129;UBERON:0007811!2.02e-19!129;UBERON:0002021!3.66e-18!5;UBERON:0004121!4.23e-18!169;UBERON:0002308!2.29e-15!9;UBERON:0000125!2.29e-15!9;UBERON:0000200!5.24e-15!6;UBERON:0009663!6.70e-13!7;UBERON:0001905!7.44e-13!2;UBERON:0002757!7.44e-13!2;UBERON:0010134!7.44e-13!2;UBERON:0002784!7.44e-13!2;UBERON:0005408!7.44e-13!2;UBERON:0001899!7.44e-13!2;UBERON:0000025!2.10e-11!194;UBERON:0002298!3.10e-11!8;UBERON:0002420!4.61e-10!9;UBERON:0007245!4.61e-10!9;UBERON:0010009!4.61e-10!9;UBERON:0010011!4.61e-10!9;UBERON:0000454!4.61e-10!9;UBERON:0004111!3.63e-09!241;UBERON:0002771!1.28e-08!3;UBERON:0006331!2.01e-08!3;UBERON:0001896!3.50e-08!3;UBERON:0005290!3.50e-08!3;UBERON:0010096!3.50e-08!3;UBERON:0001894!5.06e-08!7;UBERON:0006222!5.06e-08!7;UBERON:0000477!9.27e-08!286;UBERON:0003112!4.01e-07!1;UBERON:0000032!4.01e-07!1;UBERON:0005253!4.01e-07!1;UBERON:0003128!4.01e-07!1;UBERON:0002241!4.01e-07!1;UBERON:0001703!4.01e-07!1;UBERON:0004761!4.01e-07!1;UBERON:0009617!4.01e-07!1;UBERON:0001871!6.98e-07!7;UBERON:0001882!7.57e-07!1;UBERON:0005403!7.57e-07!1;UBERON:0003296!7.81e-07!4;UBERON:0010133!7.81e-07!4;UBERON:0002038!8.49e-07!1;UBERON:0009661!8.49e-07!1;UBERON:0002581!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.52e-50;2!UBERON:0002757;4.52e-50;2!UBERON:0010134;4.52e-50;2!UBERON:0005408;4.52e-50;2!UBERON:0001899;4.52e-50;2!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0002784;7.14e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0001894;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002784,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,2.33832412111851,0.867550349813015,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,0.756215088665154,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0,0,0,0,0,0,0.535701835878287,1.68141861109412,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0.785233868459781,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@DCC | |||
}} |
Revision as of 19:23, 20 January 2014
Short description: | p19@DCC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_DCC_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_NM_005215_5end |
EntrezGene: | DCC |
HGNC: | 2701 |
UniProt: | P43146Q49AK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-50 | 2 |
regional part of epithalamus | 4.52e-50 | 2 |
secretory circumventricular organ | 4.52e-50 | 2 |
circumventricular organ | 4.52e-50 | 2 |
epithalamus | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
regional part of diencephalon | 7.14e-26 | 4 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.73e-11 | 10 |