FFCP PHASE1:Hg19::chr18:52969844..52969895,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |||
|TSSclassifier=strong | |||
|UniProt=G0LNV1,P15884 | |||
|association_with_transcript=0bp_to_NM_001243236,uc002lgb.1_5end | |||
|description=CAGE_peak_27_at_TCF4_5end | |||
|id=chr18:52969844..52969895,- | |||
|ontology_enrichment_celltype=CL:0002620!7.63e-26!23;CL:0000057!6.98e-22!75;CL:0000055!2.23e-11!180;CL:0002551!1.48e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.78e-38;23!CL:0002551;2.33e-23;6!CL:0000057;7.26e-18;73!CL:0002367;3.24e-09;2!CL:0002583;2.32e-08;2!CL:0002600;4.37e-08;2!CL:0002552;9.09e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.45e-38,23;CL:0000057,6.13e-38,76;CL:0002551,1.97e-23,6;CL:0002367,3.00e-09,2;CL:0002583,3.02e-08,2;CL:0002600,5.26e-08,2;CL:0002552,9.75e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.19e-07!5;DOID:450!5.19e-07!5;DOID:66!5.19e-07!5;DOID:423!5.19e-07!5;DOID:0080000!5.19e-07!5;DOID:11722!5.19e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.11e-07;5!DOID:450;4.11e-07;5!DOID:66;4.11e-07;5!DOID:423;4.11e-07;5!DOID:0080000;4.11e-07;5!DOID:11722;4.11e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.49e-07,5;DOID:450,4.49e-07,5;DOID:66,4.49e-07,5;DOID:423,4.49e-07,5;DOID:0080000,4.49e-07,5;DOID:11722,4.49e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.19e-21!95;UBERON:0002097!1.40e-20!40;UBERON:0002199!1.75e-20!45;UBERON:0002416!1.75e-20!45;UBERON:0002067!2.99e-10!9;UBERON:0004016!2.99e-10!9;UBERON:0010083!2.99e-10!9;UBERON:0000475!3.32e-09!365;UBERON:0000914!1.62e-07!83;UBERON:0002329!1.62e-07!83;UBERON:0003077!1.62e-07!83;UBERON:0003059!1.62e-07!83;UBERON:0007282!1.62e-07!83;UBERON:0009618!1.62e-07!83;UBERON:0007285!1.62e-07!83;UBERON:0001444!7.82e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.25e-20;9!UBERON:0002097;6.87e-20;41!UBERON:0002199;2.36e-19;46!UBERON:0002416;2.36e-19;46!UBERON:0003102;3.64e-18;50!UBERON:0005969;3.24e-09;2!UBERON:0003956;3.24e-09;2!UBERON:0000165;8.19e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.64e-28,46;UBERON:0002416,6.64e-28,46;UBERON:0003102,1.96e-27,99;UBERON:0002097,1.30e-25,41;UBERON:0002067,9.80e-21,9;UBERON:0004016,9.80e-21,9;UBERON:0010083,9.80e-21,9;UBERON:0000165,2.24e-09,29;UBERON:0000930,2.24e-09,29;UBERON:0005969,3.00e-09,2;UBERON:0003956,3.00e-09,2;UBERON:0001444,4.86e-09,49;UBERON:0000033,1.36e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,3.98346434117454,1.24864030732128,1.71141546463335,6.87463930538285,9.15989089421366,11.0073602170329,9.69110566245515,7.14539599392126,2.21101771161182,5.88956952701863,0,0.247266929278557,0,0,5.38675564653012,4.00379263590285,7.20366700258876,0.877955241761676,0,0.300476117813194,0,1.61450672119976,0.85422955527427,1.05965950579781,0.300091096084402,2.37020817248409,0.515281080091258,1.30281799432113,1.0126579934476,0.487185025805993,2.01947019395292,2.30124746605748,6.62748832957129,0.710019185033229,0.604512589365842,1.69560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,2.76269842704961,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2129328849652,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.25248486685276,0.444485260045183,0,0,0,0.102827492703324,0,0,1.34557301214433,0.43596006883328,1.39342743059805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,1.78428988797162,1.10391690523754,1.28855556491985,0,0,1.03473071292505,0,0,12.4243568689358,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,2.46735510084249,1.06537035187876,3.6135948646076,0,1.39452454151951,0,0,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.676695028044854,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0.290033387828457,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,1.15755106853338,1.31178950409327,0,0.30982349809975,0,0,0,0,0,0.844430541190656,0.658589785919804,7.5894634753143,5.59895552391973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0,0,0,0.295547618953547,0,0,0,0.923403102045565,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.947798694427319,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,1.80784592624426,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,2.23882204330311,0.233713309847224,1.10961172300523,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39337735327393,0,0,0.127894371303652,0,0,2.94866023118438,0,0,0,0,0,0,0,1.41070377476274,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428859265059938,0,0,0,0,0,0.17071847709395,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,5.34282092365053,0,0.994753875806841,0,0.11294608203896,0,0,0,0.437119121007915,0,0.490296643507811,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.143339583151451,0.157771562193185,0.0679914901909147,0.436350690340377,0,1.85997509083376,0.462175628631418,2.59575937274273,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.952257725854961,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,2.61260097476354,3.08009970976753,0.202056159043763,0.502055437748735,0.99798106963804,0,0,3.8614456457388,0,0,0.244482888365733,3.66206560484165,0,0,0 | |||
|short_description=p27@TCF4 | |||
}} |
Revision as of 19:25, 20 January 2014
Short description: | p27@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001243236, uc002lgb.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNV1P15884 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.45e-38 | 23 |
fibroblast | 6.13e-38 | 76 |
fibroblast of dermis | 1.97e-23 | 6 |
trabecular meshwork cell | 3.00e-09 | 2 |
subcutaneous preadipocyte | 3.02e-08 | 2 |
smooth muscle cell of trachea | 5.26e-08 | 2 |
fibroblast of gingiva | 9.75e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
integument | 6.64e-28 | 46 |
integumental system | 6.64e-28 | 46 |
surface structure | 1.96e-27 | 99 |
skin of body | 1.30e-25 | 41 |
dermis | 9.80e-21 | 9 |
dermatome | 9.80e-21 | 9 |
future dermis | 9.80e-21 | 9 |
mouth | 2.24e-09 | 29 |
stomodeum | 2.24e-09 | 29 |
reticulum trabeculare | 3.00e-09 | 2 |
aqueous drainage system | 3.00e-09 | 2 |
subdivision of head | 4.86e-09 | 49 |
head | 1.36e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.49e-07 | 5 |
myotonic disease | 4.49e-07 | 5 |
muscle tissue disease | 4.49e-07 | 5 |
myopathy | 4.49e-07 | 5 |
muscular disease | 4.49e-07 | 5 |
myotonic dystrophy | 4.49e-07 | 5 |