FFCP PHASE1:Hg19::chr19:3136024..3136039,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4383 | |||
|TSSclassifier=strong | |||
|UniProt=P30679,E9KL47 | |||
|association_with_transcript=-151bp_to_ENST00000262958,NM_002068,uc002lxf.2,uc010xhf.1_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_3_at_GNA15_5end | |||
|id=chr19:3136024..3136039,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.88e-52!112;CL:0000049!1.88e-52!112;CL:0000037!7.80e-47!172;CL:0000566!7.80e-47!172;CL:0002032!2.09e-42!165;CL:0000837!2.09e-42!165;CL:0000988!9.18e-41!182;CL:0000766!3.19e-39!76;CL:0000557!1.08e-37!71;CL:0000839!4.82e-37!70;CL:0002194!2.99e-34!63;CL:0000576!2.99e-34!63;CL:0000040!2.99e-34!63;CL:0000559!2.99e-34!63;CL:0002009!3.18e-34!65;CL:0000738!5.27e-33!140;CL:0002057!1.03e-30!42;CL:0002031!2.57e-27!124;CL:0000860!5.04e-27!45;CL:0002087!3.67e-25!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.11e-27;33!CL:0002057;7.11e-27;33!CL:0000473;2.79e-26;39!CL:0000234;2.79e-26;39!CL:0000576;1.03e-24;48!CL:0000766;7.18e-21;69!CL:0000763;2.00e-18;100!CL:0000738;3.20e-09;136!CL:0000988;2.17e-08;177!CL:0002087;2.26e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.05e-62,108;CL:0000049,3.05e-62,108;CL:0000037,6.83e-51,168;CL:0000766,1.24e-49,72;CL:0000839,3.99e-47,66;CL:0000557,6.36e-47,67;CL:0002032,6.30e-46,161;CL:0000837,6.30e-46,161;CL:0000988,1.35e-45,177;CL:0002194,4.39e-44,59;CL:0000576,4.39e-44,59;CL:0000040,4.39e-44,59;CL:0000559,4.39e-44,59;CL:0002009,5.65e-43,61;CL:0000473,2.99e-39,48;CL:0000234,2.99e-39,48;CL:0000738,3.91e-36,136;CL:0000860,1.26e-34,42;CL:0002057,1.26e-34,42;CL:0002031,1.51e-29,120;CL:0002087,8.91e-28,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.89e-25;42!CL:0000049;1.88e-17;108 | |||
|ontology_enrichment_disease=DOID:1240!5.18e-14!39;DOID:8692!7.43e-13!31;DOID:2531!2.04e-10!51;DOID:0060083!2.04e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.99e-13;31!DOID:1240;8.96e-12;39!DOID:2531;2.03e-07;51!DOID:0060083;2.03e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.66e-15,39;DOID:8692,1.74e-13,31;DOID:2531,2.44e-11,51;DOID:0060083,2.44e-11,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.46e-36!102;UBERON:0003061!6.46e-36!102;UBERON:0002371!3.21e-32!80;UBERON:0002193!8.19e-31!112;UBERON:0001474!1.54e-27!86;UBERON:0004765!7.79e-22!101;UBERON:0001434!7.79e-22!101;UBERON:0002405!2.18e-20!115;UBERON:0007023!9.29e-16!115;UBERON:0003081!4.26e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.23e-44,98;UBERON:0003061,2.23e-44,98;UBERON:0002371,9.22e-41,76;UBERON:0002193,7.71e-39,108;UBERON:0001474,1.77e-35,82;UBERON:0002405,7.15e-35,93;UBERON:0004765,7.69e-33,90;UBERON:0001434,2.92e-27,100;UBERON:0003081,4.59e-12,203;UBERON:0007023,2.05e-09,114;UBERON:0002204,1.94e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,1.96597234917155,3.9565046734268,0,0,0,0,0,0,0,0,0,0,0,0,3.66784347590166,2.95562122019805,2.91229890860613,19.6682138424452,12.2825407391108,23.0676023740953,3.67768489791571,4.2168828628955,6.65557218300218,0,0,37.5808562348604,14.4038806218288,14.2386557703801,14.3227174672462,22.8393783724723,15.546895968911,22.9242255194426,64.2660215405676,52.1468802290557,49.4871484823145,51.8316752299677,47.6954750105318,47.0753683760557,84.5815633427122,73.5181227738519,55.1003595640404,38.6115162425013,30.9832648120237,20.3139729891513,70.7791196680194,52.1250746610485,41.5738446223407,69.7871274605658,53.9160765487837,46.67161018333,80.8135685457454,56.6476787645434,46.8847225585964,63.2656140210313,44.2560475259089,33.0095791967655,85.173297522036,65.1853648025252,52.5597004186382,36.3239701580021,27.6208226990674,25.6334533827116,9.92899845666126,8.07896339867165,11.740884148469,17.8602523522927,16.5194582125657,8.03627933485401,6.55529310604872,3.9783335439818,6.39324538176219,0,0,0,2.13365111283254,0,0.574752439954483,0,0,0,0,0,21.1474125726441,10.0891541336676,24.7581039688572,0.393419540227666,1.96505381374582,1.23360899399706,0.501559486172034,0,0,0,5.23629147360316,1.47302953737419,1.99380505125259,0.812411591295047,3.45846563259323,4.68213651215562,1.15106533222573,2.21080014228679,1.15921234294021,0,0.267540828089713,0,1.81294948316106,0.766440987203842,0.68725489096526,0.253019692019503,0.318565414324097,0,0,1.05402583354441,0.76791966692651,0,2.36777252044017,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.63723844372141,4.73583874780305,2.22470665670658,16.2273696827342,20.8955684759121,21.9380634856128,20.5101936902594,18.3038371449641,15.6012150558417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,3.05265836499774,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,3.81844568827169,3.15485054927904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,59.1560553215632,0,0,4.60951198716227,12.3641928583382,3.41798506199545,2.22212268380471,0,0,0,0,0,0,0,0,0,0,38.1636359435466,16.1462942946074,26.1590845628162,5.62403003920662,5.87937448696008,1.13420077793909,2.7763142037883,3.19697332365358,4.60059214998253,1.47798971368783,12.1506838938252,20.3181553229957,18.591473990788,14.3916374106073,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,13.378615870531,19.0857694744208,25.3000727379638,0,0,0,0,0,0,0,1.37921532141349,0.215627574859517,1.54011643535698,0.254094624222463,0,0,0,0,2.24702107184155,2.99161459204025,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,6.90285442619574,6.19019835259977,0,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,3.80962293576241,4.8802924136025,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53481913652154,1.5686127061494,0,0,0,4.73988653579522,0,0,2.29706215198469,2.60024098414608,0,0,0,0,0,0,0,0.0852266274161009,0,4.46269271474641,4.61256161676255,3.1903178123646,4.8555734810664,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71488352355009,12.0654409596442,8.71127878890581,3.48332062874083,5.59656984472599,6.73885902670502,4.87773168890343,7.58087220682966,4.56702848308952,3.0585488285695,4.5571774973933,5.71756261098694,5.34770955012053,2.59389324477087,2.70015718619057,5.55187623405989,0,0,1.47024129588619,0,15.4368057884796,2.91681557728498,13.8700857274075,13.9705560002972,24.1296766366782,29.8459751640675,9.08941432768755,26.956529098892,20.7693557920205,8.14735458019721,35.0888267926094,17.0984695579619,31.9570269456362,27.2429604707914,3.83261613921294,14.0837191349864,9.83170445787066,12.5258620419753,12.847383911817,8.20630000688569,11.4146531297049,4.92349595790849,7.03184764037556,20.317390047867,5.63948020351398,0,6.44635988796334,0,11.9244421176902,0,5.25237866422918,2.67268212749375,0.921482106297696,0.994147647766298,2.67271891179974,0.556543525114529,0.329607748453519,0,2.39097585901284,0.552567831062295,0.251932747854276,0,1.23084805461069,0,1.3480252672099,0.179021174675609,15.3471711068062,3.35387579165574,9.57932369387759,0,1.93866549219044,1.48428957058962,1.99613798001194,0,0,2.89999830173917,1.0241410345695,1.01701460117107,0,0,0,0,0.885741385813839,2.89431452700979,0,0.442317039724898,0,3.07139556015562,0,0.557694977114413,1.15425387755696,0,0,0.0897576444097721,0,3.82801391678303,0.641183153813036,3.19820865611181,21.4605926211047,28.0994658947094,4.65392709320438,0,0.19606253431774,0,0.37950746544837,20.1849455305081,0,0,0,0,0,0.973033209536731,0,0,0,0,1.88723172345896,1.60515529459758,0,0,0.978323094660449,0,0.394584402849391,1.20990716048664,0.61214552326098,8.02469561281797,0,0,7.31119259977904,11.253726499767,9.10405463380953,13.141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| |||
|short_description=p3@GNA15 | |||
}} |
Revision as of 20:29, 20 January 2014
Short description: | p3@GNA15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNA15_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -151bp_to_ENST00000262958, NM_002068, uc002lxf.2, uc010xhf.1_5end |
EntrezGene: | GNA15 |
HGNC: | 4383 |
UniProt: | P30679E9KL47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.05e-62 | 108 |
common myeloid progenitor | 3.05e-62 | 108 |
hematopoietic stem cell | 6.83e-51 | 168 |
myeloid leukocyte | 1.24e-49 | 72 |
myeloid lineage restricted progenitor cell | 3.99e-47 | 66 |
granulocyte monocyte progenitor cell | 6.36e-47 | 67 |
hematopoietic oligopotent progenitor cell | 6.30e-46 | 161 |
hematopoietic multipotent progenitor cell | 6.30e-46 | 161 |
hematopoietic cell | 1.35e-45 | 177 |
monopoietic cell | 4.39e-44 | 59 |
monocyte | 4.39e-44 | 59 |
monoblast | 4.39e-44 | 59 |
promonocyte | 4.39e-44 | 59 |
macrophage dendritic cell progenitor | 5.65e-43 | 61 |
defensive cell | 2.99e-39 | 48 |
phagocyte | 2.99e-39 | 48 |
leukocyte | 3.91e-36 | 136 |
classical monocyte | 1.26e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.26e-34 | 42 |
hematopoietic lineage restricted progenitor cell | 1.51e-29 | 120 |
nongranular leukocyte | 8.91e-28 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.23e-44 | 98 |
blood island | 2.23e-44 | 98 |
bone marrow | 9.22e-41 | 76 |
hemolymphoid system | 7.71e-39 | 108 |
bone element | 1.77e-35 | 82 |
immune system | 7.15e-35 | 93 |
skeletal element | 7.69e-33 | 90 |
skeletal system | 2.92e-27 | 100 |
lateral plate mesoderm | 4.59e-12 | 203 |
adult organism | 2.05e-09 | 114 |
musculoskeletal system | 1.94e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.66e-15 | 39 |
myeloid leukemia | 1.74e-13 | 31 |
hematologic cancer | 2.44e-11 | 51 |
immune system cancer | 2.44e-11 | 51 |