FFCP PHASE1:Hg19::chr19:10217364..10217409,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=56342,692312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33526,9227 | |||
|TSSclassifier=strong | |||
|UniProt=C9JHF7 | |||
|association_with_transcript=0bp_to_ENST00000430370_5end | |||
|coexpression_cluster_id=C2471 | |||
|description=CAGE_peak_3_at_PPAN-P2RY11_5end,CAGE_peak_3_at_PPAN_5end | |||
|id=chr19:10217364..10217409,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.42e-10!180;CL:0000359!1.17e-07!32;CL:0000548!4.59e-07!679;CL:0000004!4.59e-07!679;CL:0000255!4.59e-07!679;CL:0000144!6.41e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.55e-14;32!CL:0002595;2.71e-08;5!CL:0000192;6.14e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.10e-14,32;CL:0000192,2.41e-09,43;CL:0000514,2.41e-09,43;CL:0000034,2.60e-09,441;CL:0000723,1.36e-08,433;CL:0002595,2.33e-08,5;CL:0000048,2.79e-08,427;CL:0000680,4.20e-07,58;CL:0000056,4.20e-07,58;CL:0000355,4.20e-07,58;CL:0000187,5.43e-07,55;CL:0000057,7.95e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;6.14e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!3.41e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.90e-15;14!DOID:17;3.72e-07;5!DOID:450;3.72e-07;5!DOID:66;3.72e-07;5!DOID:423;3.72e-07;5!DOID:0080000;3.72e-07;5!DOID:11722;3.72e-07;5!DOID:193;8.33e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.55e-15,14;DOID:17,4.11e-07,5;DOID:450,4.11e-07,5;DOID:66,4.11e-07,5;DOID:423,4.11e-07,5;DOID:0080000,4.11e-07,5;DOID:11722,4.11e-07,5;DOID:193,7.65e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.71e-08!42;UBERON:0003509!2.71e-08!42;UBERON:0004572!2.71e-08!42;UBERON:0004573!3.91e-07!33;UBERON:0004571!3.91e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.45e-11;33!UBERON:0004571;3.45e-11;33!UBERON:0001637;1.32e-09;42!UBERON:0003509;1.32e-09;42!UBERON:0004572;1.32e-09;42!UBERON:0003834;2.71e-08;5!UBERON:0001533;2.71e-08;5!UBERON:0003513;7.70e-08;7!UBERON:0002118;9.38e-08;5!UBERON:0000992;1.66e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.08e-14,42;UBERON:0003509,1.08e-14,42;UBERON:0004572,1.08e-14,42;UBERON:0004573,5.78e-13,33;UBERON:0004571,5.78e-13,33;UBERON:0004872,1.90e-10,83;UBERON:0007500,3.40e-10,59;UBERON:0001981,3.40e-10,59;UBERON:0004537,3.40e-10,59;UBERON:0006965,3.40e-10,59;UBERON:0000055,2.41e-09,68;UBERON:0003834,2.33e-08,5;UBERON:0001533,2.33e-08,5;UBERON:0003914,2.58e-08,117;UBERON:0002049,5.11e-08,78;UBERON:0007798,5.11e-08,78;UBERON:0003513,5.99e-08,7;UBERON:0002118,1.39e-07,5;UBERON:0000992,1.57e-07,13 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.845726424575827,0,0.893922188854576,1.74467704820074,2.53299878168311,1.89515962028049,0,4.91467873003018,5.58240934377942,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,3.89708369314551,1.64201178899891,3.30585281517453,0,0.383829398097213,0,0.919421224478927,0.90361775633475,0.369754010166788,0.309868802321207,4.54941543959749,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.130059347559878,0.493313713811028,0.276350017785848,0,0,0,0,1.92625882585863,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,7.79961627245535,0,1.00267582127178,0.869079113764942,3.1811437882044,12.1658717575659,0,0.443458794925128,0.087834785693126,0.196468613246569,0.728590576585084,0,0,0.522389211897802,0.531831842075461,0,0,0,0,1.72046919021225,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,1.00416183829401,0.402829317109147,0,0,0,0.81014194788176,0,0,0,0,1.89853131913626,0.183201743930407,0,0,3.05265836499774,4.96971951695318,0.886413581652058,10.9899620074972,2.0078563452417,0.354668382198357,3.92474320099615,3.20246987189115,2.71334303258876,0.933633106199299,0.67355336034844,0,0,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0,0,0,0.204154171254893,0,0,0,0.247266929278557,1.82032272387605,0,0,0,0,0,0,0,1.58805056424029,3.58779271377724,3.63047560991565,9.32500365102072,1.20036438433761,1.54578793857658,1.8034837803194,0,3.37552664482532,3.50773218580315,5.55354303337052,2.30124746605748,0.161646056818812,2.4850671476163,0.906768884048762,2.20428770003634,0.57978255948989,0.272746120590835,0.573609190778008,0.243947412259191,0.132529768321485,3.95059405756363,1.45125477021519,2.77552935963191,0.72995471815166,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.674338760312407,0,0.441175890929576,0.871517776369625,0.71181185733329,0.134831308160164,0.196221465125346,0.38474715694639,0,2.80483547606892,0,0,0,0,0,0,0,9.77936518701596,1.31700342490351,0,0.402115889646523,0.370353780634118,0,0,2.88662684050547,1.27523445472584,0.234817388471643,0.288732895522148,0.462985512576611,0,1.58040879591855,0,0,0.702012795417713,0.297262324577456,0.93733833986777,0.503946384596579,0.567100388969546,0.268675568108545,0,3.4504441124869,3.94130590316755,0.088048434013226,0.207328115540772,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0.4400297149257,0.517086863031111,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,7.72081165753997,0,0,0,8.88479871856365,0,0.904318131178758,0,0.299918973546171,0,0,0,1.19812427745791,0,0,2.46128221334885,0.821905290201534,0.537182889719687,2.12961773587702,0,0.431255149719035,0.128343036279748,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0,0.542530047399471,4.15941723061614,1.96271887676878,0.315404830067869,1.87426263988341,3.91229929646035,0,0,1.32845119707087,1.29058417979192,0.173767228936166,0.587403472388222,1.02943027143257,0,0,0,0,0,1.20956117331872,1.24053903909388,3.6830873589135,1.40330047216537,4.86928767171664,2.04682899626681,0.321707842287215,5.93672265779964,0.154209693802656,0.532685175939381,0.164254312027618,0,0,0.241718899183244,4.81215528727884,0.276242966807689,0.229628896329213,0,0,0,1.46329140498388,0,0,0.844413031143006,0,0,0,0,0.541892875087706,0,0,0,0.447749509444357,0,0,0,0,0,0,0.457847324091717,0.330037999682352,0,0.650060246036521,8.03419649220798,0,0.154048617114644,0.15350367472613,0,0.322260734604821,0.145016693914229,0.170453254832202,0,3.14041339185858,0.768760269460425,4.08360679982669,0.910420027699949,11.1562931831349,22.0368642781448,3.485186350803,4.00443654228915,1.59691809095107,1.73986598415015,3.89180860118232,1.86062352764589,0,0,0.190630193923825,0,0,2.22742273548156,5.49464048139461,0,0,0.117812402345686,1.01091240786658,4.75530963519025,0,0,3.89941583410055,7.39551027297288,0.272999822815972,0.282810863907425,1.13008116620243,9.92457618383023,5.30751180192976,2.63070531152258,0.578775534266688,0,3.44947640836597,0.30982349809975,2.25356482025793,0,0.0982490410131212,1.426684205925,0,0.633322905892992,0.329294892959902,0,0.349934720244983,0.48111056362756,2.68120910214315,0,0.282431402330337,3.44404298136984,1.68471475667626,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0.721346064882224,0.995985806877798,0.159426272728822,0,0,1.2700414963433,0,0,0,0.156679895773023,0,0,0.321176150207399,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,1.08182271390393,0.66614393599564,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0,0.95497793895076,0,0.614321404198464,0.994147647766298,0.562677665642051,0.890469640183247,1.48323486804084,0,0,0,0.251932747854276,0.715880777515084,5.41573144028706,9.64222721751603,0,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0.682760689712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| |||
|short_description=p3@PPAN-P2RY11,p3@PPAN | |||
}} |
Revision as of 21:12, 20 January 2014
Short description: | p3@PPAN-P2RY11, p3@PPAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PPAN-P2RY11_5end, CAGE_peak_3_at_PPAN_5end |
Coexpression cluster: | C2471_basal_Smooth_mucinous_Chondrocyte_H9_Cardiac_Sertoli |
Association with transcript: | 0bp_to_ENST00000430370_5end |
EntrezGene: | 56342,692312 |
HGNC: | 9227&submit=Submit 33526, 9227 |
UniProt: | C9JHF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.10e-14 | 32 |
smooth muscle cell | 2.41e-09 | 43 |
smooth muscle myoblast | 2.41e-09 | 43 |
stem cell | 2.60e-09 | 441 |
somatic stem cell | 1.36e-08 | 433 |
smooth muscle cell of the subclavian artery | 2.33e-08 | 5 |
multi fate stem cell | 2.79e-08 | 427 |
muscle precursor cell | 4.20e-07 | 58 |
myoblast | 4.20e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.20e-07 | 58 |
muscle cell | 5.43e-07 | 55 |
fibroblast | 7.95e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
artery | 1.08e-14 | 42 |
arterial blood vessel | 1.08e-14 | 42 |
arterial system | 1.08e-14 | 42 |
systemic artery | 5.78e-13 | 33 |
systemic arterial system | 5.78e-13 | 33 |
splanchnic layer of lateral plate mesoderm | 1.90e-10 | 83 |
epithelial tube open at both ends | 3.40e-10 | 59 |
blood vessel | 3.40e-10 | 59 |
blood vasculature | 3.40e-10 | 59 |
vascular cord | 3.40e-10 | 59 |
vessel | 2.41e-09 | 68 |
thoracic segment blood vessel | 2.33e-08 | 5 |
subclavian artery | 2.33e-08 | 5 |
epithelial tube | 2.58e-08 | 117 |
vasculature | 5.11e-08 | 78 |
vascular system | 5.11e-08 | 78 |
trunk blood vessel | 5.99e-08 | 7 |
right ovary | 1.39e-07 | 5 |
female gonad | 1.57e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.55e-15 | 14 |
musculoskeletal system disease | 4.11e-07 | 5 |
myotonic disease | 4.11e-07 | 5 |
muscle tissue disease | 4.11e-07 | 5 |
myopathy | 4.11e-07 | 5 |
muscular disease | 4.11e-07 | 5 |
myotonic dystrophy | 4.11e-07 | 5 |
reproductive organ cancer | 7.65e-07 | 29 |