FFCP PHASE1:Hg19::chr19:16436186..16436202,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2481 | |||
|description=CAGE_peak_at_chr19:16436186..16436202,+ | |||
|id=chr19:16436186..16436202,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.22e-13!140;CL:0000791!5.87e-11!18;CL:0000789!5.87e-11!18;CL:0002420!5.87e-11!18;CL:0002419!5.87e-11!18;CL:0000790!5.87e-11!18;CL:0002087!6.63e-11!119;CL:0002031!1.11e-09!124;CL:0000838!3.11e-09!52;CL:0000542!8.11e-09!53;CL:0000051!8.11e-09!53;CL:0000094!1.38e-07!8;CL:0000625!3.05e-07!11;CL:0000084!6.85e-07!25;CL:0000827!6.85e-07!25;CL:0000081!8.31e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.66e-18;18!CL:0000789;1.66e-18;18!CL:0002419;1.66e-18;18!CL:0000236;2.42e-14;13!CL:0000084;1.47e-13;25!CL:0000542;2.87e-13;53!CL:0000094;4.74e-13;8!CL:0000625;8.18e-13;11!CL:0000081;5.60e-11;11!CL:0000624;1.03e-08;6!CL:0002087;8.35e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.89e-27,136;CL:0000838,8.46e-22,52;CL:0000542,3.41e-21,53;CL:0000051,3.41e-21,53;CL:0002087,5.24e-20,115;CL:0000791,6.45e-19,18;CL:0000789,6.45e-19,18;CL:0002420,6.45e-19,18;CL:0002419,6.45e-19,18;CL:0000790,6.45e-19,18;CL:0002031,8.55e-19,120;CL:0000037,2.20e-18,168;CL:0000988,2.86e-17,177;CL:0002032,4.81e-17,161;CL:0000837,4.81e-17,161;CL:0000084,7.42e-14,25;CL:0000827,7.42e-14,25;CL:0000094,3.92e-13,8;CL:0000236,4.22e-13,14;CL:0000625,4.22e-13,11;CL:0000081,5.92e-11,11;CL:0000624,7.30e-09,6;CL:0000766,1.95e-08,72;CL:0002393,1.34e-07,9;CL:0002397,1.34e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.66e-18;18!CL:0000051;2.87e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.60e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.845726424575827,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4407426443737,2.68680578668049,4.95411594611443,0,0,0,0,0,0,0,0.601633342410425,3.47217393145363,1.56740831967947,1.29557466407592,1.03030227053675,0.726991193897824,0,1.21292030593908,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0.236482229888585,2.06847408441971,0.645484683583826,0,0.188242339542605,1.09162460023138,0,1.22433556948361,0.641858054152187,1.27867425159808,0.659702600373432,0,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0.217188844705117,0,0,0,1.90129757680748,2.97646019951061,1.46761051855863,0.898629049171961,1.05123824989054,0.48217676009124,2.85012743741249,5.37075028437543,2.92262646023414,5.27988733383968,6.00752472388345,4.44754626931777,3.84057200309856,5.60554381850417,2.29900975981793,4.62731410949403,4.77026877267682,6.26134266020393,4.69789751496751,7.26319133437935,0,0.560508562981536,0,1.37696839079683,3.93010762749165,3.70082698199117,3.51091640320424,1.62961133316795,3.78758244587787,3.89653456815823,4.01077644786625,4.12448270464772,3.54454231333794,1.89562704635511,5.12365278902701,2.47112760363769,1.64437904603676,0.276350017785848,1.15921234294021,2.81744470007915,3.47803076516627,4.18142095219907,2.60611488204402,2.68254345521345,2.40539211837841,3.28925599625354,1.59282707162048,3.90650072313851,1.90090408889675,4.06552821509986,3.19966527886046,0,4.02521328474829,1.64225599384209,4.83856183739358,5.61624411145365,7.38604459802275,0,0,0,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0,0,0,1.70272798147026,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0.208994966536811,0,0,0,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0,0,0.112611480483322,0,0.949265659568129,0.366403487860815,1.31780417436063,11.6334079244498,0,1.49091585508596,1.2663051166458,0.397227542439656,2.29469296599051,2.12801029319014,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0.494533858557114,0,0.718618141816238,0,0,0,0,0.919463387397059,1.35214253015937,0.113432183160021,0,0,0.211931901159562,0,0,0,0.37223371266318,0.168776332241266,0.292311015483596,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,30.891889215575,22.482712733046,44.4373365660857,0,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.179060963239896,0.224170287987055,7.48716888767323,8.19384784466166,11.4225302288976,0.254094624222463,0,0,0,0,8.98808428736619,11.966458368161,5.8018171881045,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,1.50473049863859,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0.686286847621712,4.13536052245775,3.8828556147351,4.48255742774466,0.606255142892519,0,0,0,0,0.561320188866147,1.79394808957981,0,1.93024705372329,2.96836132889982,0.154209693802656,0.532685175939381,0,0,0.116210378459959,0,0,0,0.459257792658427,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0,0,0,0,0,0.976135183992909,2.57602529119306,0,0,0,0,1.6068392984416,0.580024309752732,0,0,0,0,0,0,0.445160178233687,0,0,0,0,0.464845549297286,0.94443704049192,0,1.23213432070436,0,0,0.55597265731176,0,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0,1.01091240786658,0,0,0,0.974853958525138,0,0.136499911407986,1.55545975149084,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,2.74439925886963,0.987884678879706,0,0.349934720244983,0,0.670302275535787,0,1.7887322147588,0,0,0,0,0,2.29391162142713,1.70894156152249,1.42939065274673,0,1.29694662238543,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07667176470977,0,1.44876399560722,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0.597743964753209,3.59169090190492,0,0,0,0.622079175323615,0.0898683511473268,0,0,3.74844941420348,14.3689855408164,0,0.969332746095218,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0.21787692703798,0,4.00141344219745,0,0,0.359030577639089,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,2.4441205797345,0,0.370691816839509,0,0.067401132980677,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0.884612114798832,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,1.92199335066233,0.51595809741485,0,0.0730893170861856,0,2.61870344518732,0.353024506766001,0.451961481561065,0.411125773940253,0.19871461170299,0.0633107959558787,0,0,2.1345299473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| |||
|short_description=p@chr19:16436186..16436202,+ | |||
}} |
Revision as of 21:57, 20 January 2014
Short description: | p@chr19:16436186..16436202, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:16436186..16436202, + |
Coexpression cluster: | C2481_Mast_Neutrophils_blood_lung_Natural_CD8_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.89e-27 | 136 |
lymphoid lineage restricted progenitor cell | 8.46e-22 | 52 |
lymphocyte | 3.41e-21 | 53 |
common lymphoid progenitor | 3.41e-21 | 53 |
nongranular leukocyte | 5.24e-20 | 115 |
mature alpha-beta T cell | 6.45e-19 | 18 |
alpha-beta T cell | 6.45e-19 | 18 |
immature T cell | 6.45e-19 | 18 |
mature T cell | 6.45e-19 | 18 |
immature alpha-beta T cell | 6.45e-19 | 18 |
hematopoietic lineage restricted progenitor cell | 8.55e-19 | 120 |
hematopoietic stem cell | 2.20e-18 | 168 |
hematopoietic cell | 2.86e-17 | 177 |
hematopoietic oligopotent progenitor cell | 4.81e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.81e-17 | 161 |
T cell | 7.42e-14 | 25 |
pro-T cell | 7.42e-14 | 25 |
granulocyte | 3.92e-13 | 8 |
B cell | 4.22e-13 | 14 |
CD8-positive, alpha-beta T cell | 4.22e-13 | 11 |
blood cell | 5.92e-11 | 11 |
CD4-positive, alpha-beta T cell | 7.30e-09 | 6 |
myeloid leukocyte | 1.95e-08 | 72 |
intermediate monocyte | 1.34e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.34e-07 | 9 |