FFCP PHASE1:Hg19::chr19:30199578..30199595,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25443 | |||
|TSSclassifier=not | |||
|UniProt=Q9NSK7 | |||
|association_with_transcript=-323bp_to_AL162066_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_7_at_C19orf12_5end | |||
|id=chr19:30199578..30199595,- | |||
|ontology_enrichment_celltype=CL:0000136!1.68e-25!15;CL:0000325!4.93e-24!39;CL:0000148!3.38e-16!10;CL:0000541!3.38e-16!10;CL:0000147!3.07e-11!14;CL:0002567!3.98e-11!3;CL:0002521!7.48e-11!3;CL:0000181!5.65e-09!12;CL:0000417!5.65e-09!12;CL:0000668!5.65e-09!12;CL:0000414!5.65e-09!12;CL:0000412!5.65e-09!12;CL:0000182!5.65e-09!12;CL:0002617!1.51e-07!2;CL:0000710!1.58e-07!20;CL:0000453!5.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.75e-47;13!CL:0000148;7.05e-37;10!CL:0000147;3.75e-26;14!CL:0002567;9.23e-24;3!CL:0000710;4.31e-18;20!CL:0000453;7.24e-15;5!CL:0000075;3.32e-13;27!CL:0002521;3.17e-11;3!CL:0002615;7.36e-11;3!CL:0002077;3.01e-09;34!CL:0002566;4.91e-09;1!CL:0000990;1.75e-08;8!CL:0000451;5.09e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.49e-40,15;CL:0000148,6.50e-37,10;CL:0000541,6.50e-37,10;CL:0000147,3.54e-26,14;CL:0002567,9.24e-24,3;CL:0000710,4.14e-18,20;CL:0000453,7.24e-15,5;CL:0000075,3.23e-13,27;CL:0002521,3.09e-11,3;CL:0002615,6.01e-11,3;CL:0002077,2.46e-10,34;CL:0002566,4.19e-09,1;CL:0000990,1.76e-08,8;CL:0000333,5.26e-08,41;CL:0000451,5.10e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!7.48e-11!3;UBERON:0009854!1.23e-09!23;UBERON:0002107!1.53e-09!19;UBERON:0006925!1.53e-09!19;UBERON:0008836!1.53e-09!19;UBERON:0002417!2.25e-09!61;UBERON:0000916!2.25e-09!61;UBERON:0009497!1.03e-08!25;UBERON:0000015!1.03e-08!25;UBERON:0002423!1.03e-08!25;UBERON:0006235!1.03e-08!25;UBERON:0004161!1.03e-08!25;UBERON:0009856!2.47e-08!26;UBERON:0005057!2.88e-08!26;UBERON:0008835!4.68e-08!22;UBERON:0003894!4.68e-08!22;UBERON:0005172!6.35e-08!55;UBERON:0005173!6.35e-08!55;UBERON:0007499!6.24e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.17e-11;3!UBERON:0002072;4.49e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.09e-11,3;UBERON:0002072,4.43e-07,5 | |||
|phase1_expression=0.181678379270557,5.1384125733836,1.9733616573436,0,1.78784437770915,0,2.53299878168311,0.631719873426831,4.44015567939725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,3.54473944008842,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80987365753014,4.96584953225761,3.51652341630141,3.4214489204541,1.85089486865982,3.30377363628309,6.00235508524214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,2.1760712134779,7.520696820681,15.0109332614096,15.082141012651,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,6.51037717535479,4.08913485639611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.61019034872821,0 | |||
|short_description=p7@C19orf12 | |||
}} |
Revision as of 22:33, 20 January 2014
Short description: | p7@C19orf12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_C19orf12_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -323bp_to_AL162066_5end |
EntrezGene: | C19orf12 |
HGNC: | 25443 |
UniProt: | Q9NSK7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.49e-40 | 15 |
melanocyte | 6.50e-37 | 10 |
melanoblast | 6.50e-37 | 10 |
pigment cell | 3.54e-26 | 14 |
light melanocyte | 9.24e-24 | 3 |
neurecto-epithelial cell | 4.14e-18 | 20 |
Langerhans cell | 7.24e-15 | 5 |
columnar/cuboidal epithelial cell | 3.23e-13 | 27 |
subcutaneous fat cell | 3.09e-11 | 3 |
adipocyte of omentum tissue | 6.01e-11 | 3 |
ecto-epithelial cell | 2.46e-10 | 34 |
dark melanocyte | 4.19e-09 | 1 |
conventional dendritic cell | 1.76e-08 | 8 |
migratory neural crest cell | 5.26e-08 | 41 |
dendritic cell | 5.10e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 3.09e-11 | 3 |
hypodermis | 4.43e-07 | 5 |