FFCP PHASE1:Hg19::chr19:56028873..56028888,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1063 | |||
|description=CAGE_peak_at_chr19:56028873..56028888,+ | |||
|id=chr19:56028873..56028888,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.51e-11!75;CL:0002620!1.32e-08!23;CL:0000055!4.64e-08!180;CL:0000153!2.70e-07!9;CL:0000447!2.70e-07!9;CL:0000327!3.12e-07!14;CL:0000667!9.23e-07!6;CL:0000058!9.23e-07!6;CL:0000138!9.23e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;3.98e-13;6!CL:0002570;1.94e-09;8!CL:0000153;9.10e-09;9!CL:0000447;9.10e-09;9!CL:0000135;2.59e-07;3!CL:0000388;2.59e-07;3!CL:0002620;8.78e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.08e-13,6;CL:0000138,4.08e-13,6;CL:0002570,3.01e-09,8;CL:0000153,9.23e-09,9;CL:0000447,9.23e-09,9;CL:0000135,1.78e-07,3;CL:0000388,1.78e-07,3;CL:0002620,7.36e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.15e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.17e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.99e-11;14!UBERON:0007846;2.59e-07;3!UBERON:0000043;2.59e-07;3!UBERON:0007845;2.59e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,3.60e-11,14;UBERON:0007846,1.78e-07,3;UBERON:0000043,1.78e-07,3;UBERON:0007845,1.78e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.56711376919903,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,3.2529523714611,0.50133791063589,3.0417768981773,2.3858578411533,1.45990461090791,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.264818361626438,1.72101972449288,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0.448346041655403,0,0,0,0,0,0.103325781175765,1.18800285728205,0.741800787835671,1.82032272387605,0,0.168336113954066,0,0.277064115484183,0,0.30648779579902,0,0,1.61450672119976,0.640672166455702,1.27159140695737,0.300091096084402,0.206105058476878,2.06112432036503,0.37223371266318,1.85653965465393,0.974370051611986,2.01947019395292,0.368199594569197,0.161646056818812,3.19508633264953,0.604512589365842,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97065295158377,0.176096868026452,0,0,0,0.063497894292169,1.14596527667483,0,0,0.102827492703324,0,0,0.112131084345361,0,0.51336800074665,0,3.57656445851882,0,1.06375246633948,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.2269149171914,0.500170521059677,0.271265023699736,0.831883446123229,3.7470087647404,0.315404830067869,1.17141414992713,0,0,0,2.65690239414175,0,0.60818530127658,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0,0.460385919864187,0.561320188866147,0,0,0.64341568457443,1.48418066444991,0.308419387605311,0.887808626565635,0.328508624055237,0.519254429183621,0.232420756919918,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.308097234229289,0,0,0.859361958946189,0.145016693914229,0.0852266274161009,1.15741646340759,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.844430541190656,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.796991953004279,0,0,0,0.123084805461069,0,0,0.179021174675609,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.552896299656123,0,0,0,0,0.615602068030377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.34945333648406,1.0319161948297,0,0,0,0.193978032976839,0.264768380074501,0.451961481561065,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0.523014231561666,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.687481272035051,0,0,0.429226048136571,0,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0.864221491201268,1.95952416065645,0,0,0.511164065356265,0,0.146552233678082,0,0.129282956361551,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0.573409195690071,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,1.04478362020812,1.40227985908335,1.10961172300523,0.568209015825267,0.754703705257725,0,0,0.604923695052956,0.15543720058278,0.295710299979268,1.11507737014592,0,0.465788870628778,1.24411862352257,0.797525143673985,0,3.30566739793881,0.761610424337591,1.22061219961398,0,1.28892668450986,0,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0,0.214441591374926,0,0,0.926089897295336,0.489473409012935,0.358177682162975,0,0,0.530067437837643,0.38582807654183,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.513833800771676,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,1.59363533945908,0,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.471346769748006,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| |||
|short_description=p@chr19:56028873..56028888,+ | |||
}} |
Revision as of 01:14, 21 January 2014
Short description: | p@chr19:56028873..56028888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56028873..56028888, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.08e-13 | 6 |
chondrocyte | 4.08e-13 | 6 |
mesenchymal stem cell of adipose | 3.01e-09 | 8 |
GAG secreting cell | 9.23e-09 | 9 |
carbohydrate secreting cell | 9.23e-09 | 9 |
fibrocyte | 1.78e-07 | 3 |
tendon cell | 1.78e-07 | 3 |
skin fibroblast | 7.36e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 3.60e-11 | 14 |
dense regular connective tissue | 1.78e-07 | 3 |
tendon | 1.78e-07 | 3 |
regular connective tissue | 1.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.17e-08 | 14 |