FFCP PHASE1:Hg19::chr2:42396732..42396743,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27436 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1316 | |||
|TSSclassifier=strong | |||
|UniProt=B5MBZ0 | |||
|association_with_transcript=131bp_to_ENST00000401738_5end | |||
|description=CAGE_peak_3_at_EML4_5end | |||
|id=chr2:42396732..42396743,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.44e-12!42;CL:0000860!6.01e-11!45;CL:0000766!5.03e-08!76;CL:0000738!7.52e-08!140;CL:0002009!1.31e-07!65;CL:0000557!6.10e-07!71;CL:0002194!8.66e-07!63;CL:0000576!8.66e-07!63;CL:0000040!8.66e-07!63;CL:0000559!8.66e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.66e-18;33!CL:0002057;2.66e-18;33!CL:0000473;5.37e-12;39!CL:0000234;5.37e-12;39!CL:0000576;2.63e-09;48!CL:0000766;1.80e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.69e-17,42;CL:0002057,1.69e-17,42;CL:0002009,1.26e-14,61;CL:0000473,1.81e-14,48;CL:0000234,1.81e-14,48;CL:0000766,1.81e-13,72;CL:0000557,1.17e-12,67;CL:0002194,1.59e-12,59;CL:0000576,1.59e-12,59;CL:0000040,1.59e-12,59;CL:0000559,1.59e-12,59;CL:0000738,8.20e-11,136;CL:0000839,1.67e-10,66;CL:0000763,1.38e-09,108;CL:0000049,1.38e-09,108;CL:0002087,3.85e-09,115;CL:0002031,1.33e-08,120;CL:0000037,4.65e-08,168;CL:0002032,1.21e-07,161;CL:0000837,1.21e-07,161;CL:0000988,3.79e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.76e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.18e-11,82;UBERON:0002371,3.05e-11,76;UBERON:0002390,4.20e-10,98;UBERON:0003061,4.20e-10,98;UBERON:0004765,6.26e-10,90;UBERON:0002405,1.73e-09,93;UBERON:0002193,3.24e-09,108;UBERON:0001434,3.42e-08,100 | |||
|phase1_expression=0,0.428201047781966,0.704772020479856,1.0007329835313,0.446961094427288,2.61701557230111,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0,0,0.74259811776028,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.458480434487708,0.492603536699674,0.708397031823113,0.393364276848904,1.15148819429164,0.77408061658038,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0.293600439334847,1.10799081706375,1.00272223735071,0.434021741431704,1.11957737119962,0.647787332037959,0.257575567634187,0.436194716338694,1.13362783106643,0.727752183563449,0.464858073811369,1.6446715520873,0.929119112685311,0.863077176966451,2.30544635876191,2.36482229888585,1.03423704220986,1.93645405075148,0,1.31769637679823,0.818718450173537,1.12361742222542,0,2.24650318953266,1.27867425159808,0.989553900560148,1.19678194572979,2.98357325372886,1.45104619314292,1.13477044938228,2.4912889959823,1.7587406567972,1.5644487552606,1.73751075764093,2.42159801053347,2.57794345191295,1.26584954976354,0.422510572623884,0.637812899895131,0.209658645508376,0.673971786878971,0.600707571366025,0.32145117339416,0.570025487482497,0.39783335439818,0.547992461293902,1.75996244461323,0.546138611262131,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.590129310341499,0.393010762749165,2.46721798799411,1.00311897234407,1.62961133316795,0,0,0.891283655081389,0.589211814949674,1.32920336750173,1.35401931882508,1.15282187753108,0.520237390239513,0.822189523018381,0.552700035571697,1.73881851441031,0.889719378972363,0.535081656179426,2.09071047609954,0.566546713487831,1.14966148080576,1.71813722741315,2.02415753615602,0.95569624297229,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.201606743224732,2.94184215361858,1.15859523106239,2.43806866313962,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,0.579386075843295,0.795285947051099,0,0.661743720148475,0,0.263504357079378,0.261958150995425,0,0,1.29818957461873,0,0.398873881556595,0,0,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0.735326160691737,0,0.803697554556718,0.44905874525234,0.225222960966644,0,0,0.549605231791222,2.63560834872127,0,0,0.993943903390637,0.506522046658319,1.32409180813219,1.72101972449288,0.354668382198357,1.12135520028461,0,0.49333509683432,1.24484414159907,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.323745888736263,0.842704840213491,1.02077085627447,0.737005903870608,0.413303124703062,0,0.989067717114227,0,0,0.336672227908132,0.375355559615893,0.831192346452549,0.438977620880838,0.30648779579902,0.45071417671979,0.340296549480063,0.89694817844431,0.213557388818567,0.211931901159562,0,0.515262646192195,1.28820270022815,0.37223371266318,1.18143432568886,0.389748020644795,2.27190396819703,0.552299391853796,1.45481451136931,1.06502877754984,0.403008392910561,0.169560592310488,0,0.545492241181669,0.573609190778008,0.243947412259191,0.927708378250397,0.464775771478074,0.725627385107593,0.756962552626885,0.72995471815166,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,2.53510069643662,0,1.18157981336281,0.882926198829301,0.245976877086227,0.514703430895577,0.548751427043128,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.231860809950154,0.821860859650752,0.144366447761074,0,0,0,0.858486162094873,0.984868024349589,0.234004265139238,0.445893486866185,0.93733833986777,0.16798212819886,0.567100388969546,0.447792613514241,0.581267877027924,0,0,0.528290604079356,0.414656231081544,0.288239906833923,0.88369703398466,0.571481048629521,0,0,0,0.308482478109971,0.300343057843917,1.14330573052231,0.336393253036082,0.43596006883328,0.5867062865676,0.646358578788889,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0,0.112085143993527,0.788123040807709,1.94064817373566,0.898401253958239,1.77866236955724,0,0.773288812777695,0.167516265334349,0,0.749007023947182,11.966458368161,1.24324654030811,0.36807447515742,0,0.271265023699736,0.207970861530807,1.07057393278297,0.473107245101804,0.35142424497814,0,0,0,0.664225598535437,0.184369168541703,0.695068915744663,0.391602314925481,0.686286847621712,1.44737618286021,1.07857100409308,0.640365346820666,0,0,0.604780586659361,0.248107807818777,0.767309866440312,1.12264037773229,0.512556597022804,0,0.482561763430822,0,0.925258162815933,0.177561725313127,0.574890092096664,0.519254429183621,1.04589340613963,1.0877350463246,0,0.0920809889358963,0.459257792658427,0.364182336013434,0.524497659837696,0.451199612907412,0,0,0,0.2111032577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| |||
|short_description=p3@EML4 | |||
}} |
Revision as of 02:47, 21 January 2014
Short description: | p3@EML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EML4_5end |
Coexpression cluster: | NA |
Association with transcript: | 131bp_to_ENST00000401738_5end |
EntrezGene: | EML4 |
HGNC: | 1316 |
UniProt: | B5MBZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.69e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-17 | 42 |
macrophage dendritic cell progenitor | 1.26e-14 | 61 |
defensive cell | 1.81e-14 | 48 |
phagocyte | 1.81e-14 | 48 |
myeloid leukocyte | 1.81e-13 | 72 |
granulocyte monocyte progenitor cell | 1.17e-12 | 67 |
monopoietic cell | 1.59e-12 | 59 |
monocyte | 1.59e-12 | 59 |
monoblast | 1.59e-12 | 59 |
promonocyte | 1.59e-12 | 59 |
leukocyte | 8.20e-11 | 136 |
myeloid lineage restricted progenitor cell | 1.67e-10 | 66 |
myeloid cell | 1.38e-09 | 108 |
common myeloid progenitor | 1.38e-09 | 108 |
nongranular leukocyte | 3.85e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.33e-08 | 120 |
hematopoietic stem cell | 4.65e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.21e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-07 | 161 |
hematopoietic cell | 3.79e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.18e-11 | 82 |
bone marrow | 3.05e-11 | 76 |
hematopoietic system | 4.20e-10 | 98 |
blood island | 4.20e-10 | 98 |
skeletal element | 6.26e-10 | 90 |
immune system | 1.73e-09 | 93 |
hemolymphoid system | 3.24e-09 | 108 |
skeletal system | 3.42e-08 | 100 |