FFCP PHASE1:Hg19::chr2:65659469..65659483,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17722 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z698 | |||
|association_with_transcript=-158bp_to_ENST00000356388_5end | |||
|description=CAGE_peak_3_at_SPRED2_5end | |||
|id=chr2:65659469..65659483,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.32e-16!365;UBERON:0000481!2.87e-12!347;UBERON:0000153!5.04e-11!129;UBERON:0007811!5.04e-11!129;UBERON:0004121!7.42e-11!169;UBERON:0000033!3.45e-10!123;UBERON:0000924!5.52e-10!173;UBERON:0006601!5.52e-10!173;UBERON:0001017!4.50e-09!82;UBERON:0000955!9.89e-09!69;UBERON:0006238!9.89e-09!69;UBERON:0001049!1.59e-08!57;UBERON:0005068!1.59e-08!57;UBERON:0006241!1.59e-08!57;UBERON:0007135!1.59e-08!57;UBERON:0000073!1.68e-08!94;UBERON:0001016!1.68e-08!94;UBERON:0003075!2.07e-08!86;UBERON:0007284!2.07e-08!86;UBERON:0002616!3.68e-08!59;UBERON:0005743!4.73e-08!86;UBERON:0002346!2.36e-07!90 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,9.57e-09,223;UBERON:0001016,1.15e-08,89;UBERON:0004121,1.18e-08,171;UBERON:0000924,1.18e-08,171;UBERON:0006601,1.18e-08,171;UBERON:0010314,3.44e-08,132;UBERON:0001017,5.14e-08,81;UBERON:0001049,8.08e-08,56;UBERON:0005068,8.08e-08,56;UBERON:0006241,8.08e-08,56;UBERON:0007135,8.08e-08,56;UBERON:0000955,9.46e-08,68;UBERON:0006238,9.46e-08,68;UBERON:0003075,4.52e-07,82;UBERON:0007284,4.52e-07,82;UBERON:0000073,5.61e-07,53;UBERON:0002616,5.61e-07,53 | |||
|phase1_expression=1.09007027562334,2.14100523890983,1.40954404095971,2.00146596706261,0.446961094427288,1.74467704820074,2.53299878168311,3.15859936713415,1.04474251279935,0.737201809504527,0.697801167972428,0.218441372130172,0.791300934685361,0.990130823680373,2.31978163009541,1.34465029290355,0,0.730310090387373,1.46379839637152,0.984968464614303,2.04000691244253,0.313454721478088,0.85870796139317,1.91624195102038,1.88313959392204,2.52164238968239,1.47781061009902,3.7781175030566,0,0,0.309632246632152,0,0.6024118375565,0.739508020333575,9.5284656713771,0.142169232487422,0.293600439334847,0,0.601633342410425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,1.21079900526674,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,4.87613732627923,1.34140171940727,0.12786256184353,0.361439152384566,0.50133791063589,1.59331170856906,0,0.486634870302636,1.03988298880475,0.665188192387692,1.58102614247627,1.57174890597255,2.91436230634034,0.741568885568859,1.62273696827342,1.0447784237956,1.99436940778298,1.90792499444274,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,1.49091585508596,0.759783069987479,1.19168262731897,1.43418310374407,2.12801029319014,1.12135520028461,1.06748995729705,0.74000264525148,0.933633106199299,0.538842688278752,0.980771418680752,4.69208025699287,4.03323147135999,2.34321431833797,0.936480230490962,0,2.69007624993242,1.87895197830024,1.45685649931318,1.82586048712923,1.83738754129404,1.10550885580591,1.23990937410919,1.18800285728205,6.18167323196392,0.910161361938026,1.43723628363248,1.68336113954066,2.25213335769535,2.49357703935765,1.75591048352335,3.67785354958824,5.40857012063748,0,1.61450672119976,1.49490172172997,1.05965950579781,1.20036438433761,1.44273540933814,0,1.48893485065272,0.506328996723799,0.779496041289589,1.51460264546469,3.86609574297657,2.10139873864455,0.355009592516614,0.302256294682921,0.339121184620975,0.57978255948989,2.18196896472668,0.573609190778008,0.487894824518382,0.927708378250397,0.813357600086629,0.414644220061482,1.51392510525377,0,0,1.28648187638577,0,1.39310378409594,0.721879481669586,0,0.505754070234305,0,0.661763836394364,0.435758888184812,0.71181185733329,0.269662616320329,0,0.38474715694639,0,2.80483547606892,0.8231480226628,0,0,2.94848165003288,0.590789906681404,0,1.10689594688802,1.54411029268673,0.548751427043128,0,1.00528972411631,1.38882667737794,1.95484983186195,4.15973914111831,0,0.695582429850461,0.821860859650752,0,0,0,2.37061319387782,0,0.246217006087397,1.17002132569619,1.0404181360211,0,0.16798212819886,0.850650583454319,0.895585227028483,0.581267877027924,1.53353071666084,24.1404986569012,0.880484340132261,0.414656231081544,0.432359860250884,0.6312121671319,0.190493682876507,1.14596527667483,2.34434894420094,0,0.411309970813294,1.50171528921959,0.285826432630578,3.1396703616701,3.92364061949952,3.0802080044799,2.06834745212444,3.57656445851882,0.845302752556,3.98907174877306,4.16029747645464,0.514414748524284,5.67396528093113,1.0656887160644,0.57191197463259,0,0,1.62868092146868,0.710783897485092,0.791951872933429,0.904318131178758,1.74306691720059,0.599837947092342,1.2162378064119,0,0,0.479249710983165,1.14861935834114,5.70547620162874,1.15825045334063,1.2328579353023,1.43248770591916,3.81089489577993,0.197030760201927,0.215627574859517,0.385029108839245,9.90969034467607,2.60279707715243,0,0.670065061337395,1.91381625495949,0,0,0,1.47229790062968,0.500170521059677,2.71265023699736,1.87173775377726,1.60586089917446,0.946214490203608,4.21709093973768,2.10662269809403,0,4.1389228517002,0,1.10621501125022,1.56390506042549,5.286631251494,6.17658162859541,0.206768026122887,0.431428401637234,0.213455115606889,0.303127571446259,0,0.30239029332968,1.73675465473144,0.61384789315225,1.12264037773229,2.43464383585832,0.511707249066704,2.2519548960105,0,4.47208112027701,3.55123450626254,3.53146770859379,3.63478100428535,3.95115286763861,2.90062679019893,1.00253235151642,0,1.49258782613989,2.54927635209404,2.36023946926963,0.902399225814824,0.539107359730903,0.784349769176855,0,0.527758144464379,0,0,0.431831832204279,0,0.541892875087706,0,0.764628819135115,1.66215201785745,0.895499018888713,0,0,0.256450125116389,0.656029291399411,0,1.33953315142039,0.27470839445503,0.41254749960294,1.14853107599234,0,0,2.03008508413456,0.616194468458578,1.22802939780904,0.827019434907183,1.82614416276065,1.16013355131383,1.36362603865761,2.49289699810865,0,0.576570202095319,1.02090169995667,0.10115778085555,0.929691098594572,2.20368642781448,0.6970372701606,0,1.06461206063404,2.60979897622522,1.66791797193528,0.572499546967965,1.116475108079,0.632758849437452,0.95315096961912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| |||
|short_description=p3@SPRED2 | |||
}} |
Revision as of 03:34, 21 January 2014
Short description: | p3@SPRED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPRED2_5end |
Coexpression cluster: | NA |
Association with transcript: | -158bp_to_ENST00000356388_5end |
EntrezGene: | SPRED2 |
HGNC: | 17722 |
UniProt: | Q7Z698 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 9.57e-09 | 223 |
nervous system | 1.15e-08 | 89 |
ectoderm-derived structure | 1.18e-08 | 171 |
ectoderm | 1.18e-08 | 171 |
presumptive ectoderm | 1.18e-08 | 171 |
structure with developmental contribution from neural crest | 3.44e-08 | 132 |
central nervous system | 5.14e-08 | 81 |
neural tube | 8.08e-08 | 56 |
neural rod | 8.08e-08 | 56 |
future spinal cord | 8.08e-08 | 56 |
neural keel | 8.08e-08 | 56 |
brain | 9.46e-08 | 68 |
future brain | 9.46e-08 | 68 |
neural plate | 4.52e-07 | 82 |
presumptive neural plate | 4.52e-07 | 82 |
regional part of nervous system | 5.61e-07 | 53 |
regional part of brain | 5.61e-07 | 53 |