FFCP PHASE1:Hg19::chr2:176981546..176981557,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3236 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5133 | |||
|TSSclassifier=strong | |||
|UniProt=P28358 | |||
|association_with_transcript=54bp_to_NM_002148,uc002ukj.2_5end | |||
|coexpression_cluster_id=C2672 | |||
|description=CAGE_peak_5_at_HOXD10_5end | |||
|id=chr2:176981546..176981557,+ | |||
|ontology_enrichment_celltype=CL:0005020!7.31e-09!6;CL:0002138!7.31e-09!6;CL:0005022!7.31e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0002553;7.02e-13;1!CL:0000062;1.17e-11;9!CL:0002537;1.16e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.03e-13,1;CL:0002537,1.21e-09,5;CL:0000062,1.34e-09,11;CL:0000375,1.34e-09,11;CL:0000335,1.34e-09,11 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.37e-10;10!CL:0000335;1.23e-09;11 | |||
|ontology_enrichment_disease=DOID:0060084!8.81e-11!3;DOID:127!8.81e-11!3;DOID:0060072!3.53e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:1324;2.59e-07;15!DOID:1325;2.77e-07;7!DOID:3904;2.77e-07;7!DOID:0050615;6.95e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.38e-07,15;DOID:1325,2.45e-07,7;DOID:3904,2.45e-07,7;DOID:0050615,6.41e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004175!3.58e-07!25;UBERON:0003133!3.93e-07!48;UBERON:0000059!4.41e-07!11;UBERON:0003127!7.39e-07!2;UBERON:0004876!9.70e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;1.40e-12;1!UBERON:0006834;1.40e-12;1!UBERON:0002050;6.22e-10;5!UBERON:0005423;6.22e-10;5!UBERON:0000305;3.79e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.57e-12,1;UBERON:0000305,3.91e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.85422955527427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86156681609409,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,4.51419149591578,0,1.03473071292505,0,1.84369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,2.17499872630438,0,0,3.78220290828698,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60058834087354,5.4552771660398,0,0,0,0,0,0,0.542999601753713,0.864221491201268,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0.629063767423586,0,0,2.55089904122019,0,0,0,0,8.0057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96251696636676,0,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0.0620747142958579,0,0,0.404234377916439,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,2.32258743947446,2.84827324821017,0.665756774185513,0,0 | |||
|short_description=p5@HOXD10 | |||
}} |
Revision as of 06:45, 21 January 2014
Short description: | p5@HOXD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXD10_5end |
Coexpression cluster: | C2672_uterus_kidney_nonsmall_smallcell_breast_Osteoblast_Endothelial |
Association with transcript: | 54bp_to_NM_002148, uc002ukj.2_5end |
EntrezGene: | HOXD10 |
HGNC: | 5133 |
UniProt: | P28358 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.03e-13 | 1 |
amnion mesenchymal stem cell | 1.21e-09 | 5 |
osteoblast | 1.34e-09 | 11 |
osteoprogenitor cell | 1.34e-09 | 11 |
mesenchyme condensation cell | 1.34e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.57e-12 | 1 |
amnion | 3.91e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.38e-07 | 15 |
bronchus cancer | 2.45e-07 | 7 |
bronchogenic carcinoma | 2.45e-07 | 7 |
respiratory system cancer | 6.41e-07 | 16 |