FFCP PHASE1:Hg19::chr2:216248075..216248078,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=127bp_to_ENST00000490833_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_76_at_FN1_5end | |||
|id=chr2:216248075..216248078,- | |||
|ontology_enrichment_celltype=CL:0000057!4.12e-15!75;CL:0000055!5.87e-13!180;CL:0002371!4.27e-09!591;CL:0002334!5.67e-09!12;CL:0002620!4.55e-07!23;CL:0000144!7.20e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.70e-14;3!CL:0002334;2.52e-13;12!CL:0002617;2.30e-10;2!CL:0002561;5.55e-10;2!CL:0002559;1.16e-08;5!CL:0000138;9.61e-08;6!CL:0002541;1.14e-07;3!CL:0002579;3.53e-07;3!CL:0000594;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,7.27e-15,3;CL:0002334,1.59e-13,12;CL:0002617,2.31e-10,2;CL:0002561,3.52e-10,2;CL:0002559,9.01e-09,5;CL:0002541,1.14e-07,3;CL:0000058,1.36e-07,6;CL:0000138,1.36e-07,6;CL:0002579,3.89e-07,3;CL:0000594,4.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;3.03e-07;3!DOID:0060084;6.31e-07;3!DOID:127;6.31e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,3.23e-07,3;DOID:0060084,5.78e-07,3;DOID:127,5.78e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004923!4.50e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.95e-11;10!UBERON:0001443;2.26e-10;11!UBERON:0005933;5.55e-10;2!UBERON:0005942;5.55e-10;2!UBERON:0005932;5.55e-10;2!UBERON:0002073;1.16e-08;5!UBERON:0003124;1.14e-07;3!UBERON:0000920;1.14e-07;3!UBERON:0003688;1.79e-07;6!UBERON:0002358;1.79e-07;6!UBERON:0003684;1.79e-07;6!UBERON:0001178;1.79e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.30e-11,10;UBERON:0001443,1.56e-10,11;UBERON:0005933,3.52e-10,2;UBERON:0005942,3.52e-10,2;UBERON:0005932,3.52e-10,2;UBERON:0002073,9.01e-09,5;UBERON:0005086,9.01e-09,5;UBERON:0000920,1.14e-07,3;UBERON:0003688,1.39e-07,6;UBERON:0002358,1.39e-07,6;UBERON:0003684,1.39e-07,6;UBERON:0001178,1.39e-07,6 | |||
|phase1_expression=1.2717486548939,2.5692062866918,1.9733616573436,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.895037932904712,0,1.00267582127178,0.289693037921647,2.3858578411533,9.73269740605272,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,2.43042584364528,0,0,0.112611480483322,0,0,0,0,0,0,3.47880366186723,0.886413581652058,0.794455084879313,0.286836620748814,1.06400514659507,0.560677600142307,1.06748995729705,1.48000529050296,0,0.134710672069688,0,0,0.576175924479999,0,1.24864030732128,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0.340296549480063,0.538168907066586,0.427114777637135,0.847727604638247,0.300091096084402,0,0,0.744467425326359,0.843881661206331,0.487185025805993,0.757301322732344,0.644349290496095,0,0.710019185033229,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.517086863031111,3.57656445851882,0.845302752556,0.26593811658487,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.579125226670317,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.831883446123229,1.78428988797162,0.473107245101804,0.35142424497814,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,2.48107807818777,1.84154367945675,1.40330047216537,1.15325234330131,0.511707249066704,2.73451665944133,0,0.771048469013278,1.42049380250502,0.246381468041427,0,0.232420756919918,0,0.40101294060657,0,0,0,0.524497659837696,0,0,0,0,0,0,0,0,1.54227252690289,0.812839312631559,1.00337954770971,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.137836572484531,1.18162269355101,1.88521702088497,0.426133137080504,0.356128142586949,0.826424576804891,0.960950336825531,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0,0,0.38126038784765,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0.7133421029625,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.593929361665277,0.307160702099232,0,0.140669416410513,1.66963057534359,0,0,0.19924798825107,0,0,0,0,4.0435146396035,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0,0,0,8.61303131276183,0.366390373607449,14.9249737285218,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0,0,0,0,0,0.0671834724867263,2.16179930125442,0,0.0787831823072236,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0.179287339332845,0,0,0,0,1.08599920350743,1.72844298240254,0.326587360109409,0,0,1.02232813071253,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0.701139929541673,0,0.757612021100357,0.754703705257725,0,0,0.604923695052956,0,0,0.318593534327405,0,0.310525913752519,0,1.06336685823198,1.04349012362347,0,0.761610424337591,0,0.363697318405119,0.214821114084977,2.32016879939247,0.796191777397232,0.800055529326307,0,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0,0.425149840203366,0.247871528518004,0,1.27201740261367,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,2.21875575573872,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.443511850813194,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0.62164849248911,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p76@FN1 | |||
}} |
Revision as of 08:21, 21 January 2014
Short description: | p76@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_76_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 127bp_to_ENST00000490833_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 7.27e-15 | 3 |
preadipocyte | 1.59e-13 | 12 |
adipocyte of breast | 2.31e-10 | 2 |
outer root sheath cell | 3.52e-10 | 2 |
hair follicle cell | 9.01e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.14e-07 | 3 |
chondroblast | 1.36e-07 | 6 |
chondrocyte | 1.36e-07 | 6 |
omentum preadipocyte | 3.89e-07 | 3 |
skeletal muscle satellite cell | 4.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 1.30e-11 | 10 |
chest | 1.56e-10 | 11 |
hair root sheath | 3.52e-10 | 2 |
hair outer root sheath | 3.52e-10 | 2 |
bulb of hair follicle | 3.52e-10 | 2 |
hair follicle | 9.01e-09 | 5 |
hair follicle placode | 9.01e-09 | 5 |
egg chorion | 1.14e-07 | 3 |
omentum | 1.39e-07 | 6 |
peritoneum | 1.39e-07 | 6 |
abdominal cavity | 1.39e-07 | 6 |
visceral peritoneum | 1.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 3.23e-07 | 3 |
cell type benign neoplasm | 5.78e-07 | 3 |
leiomyoma | 5.78e-07 | 3 |