FFCP PHASE1:Hg19::chr2:224463466..224463480,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C708 | |||
|description=CAGE_peak_at_chr2:224463466..224463480,- | |||
|id=chr2:224463466..224463480,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.42e-11;2!CL:0002564;9.39e-08;3!CL:0000167;9.15e-07;1!CL:0000164;9.15e-07;1!CL:0000502;9.15e-07;1!CL:0000172;9.15e-07;1!CL:0000173;9.15e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.60e-10,8;CL:0002564,7.14e-08,3;CL:0000167,9.67e-07,1;CL:0000164,9.67e-07,1;CL:0000502,9.67e-07,1;CL:0000172,9.67e-07,1;CL:0000173,9.67e-07,1;CL:0002351,9.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;9.15e-07;1 | |||
|ontology_enrichment_disease=DOID:171!3.48e-10!10;DOID:169!6.69e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;2.20e-13;10!DOID:4430;9.15e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.89e-13,10;DOID:4430,9.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-41!82;UBERON:0000073!4.42e-40!94;UBERON:0001016!4.42e-40!94;UBERON:0005743!1.23e-38!86;UBERON:0001049!5.75e-34!57;UBERON:0005068!5.75e-34!57;UBERON:0006241!5.75e-34!57;UBERON:0007135!5.75e-34!57;UBERON:0000955!1.12e-31!69;UBERON:0006238!1.12e-31!69;UBERON:0002616!3.00e-30!59;UBERON:0002346!8.10e-26!90;UBERON:0002780!5.38e-25!41;UBERON:0001890!5.38e-25!41;UBERON:0006240!5.38e-25!41;UBERON:0003080!3.48e-24!42;UBERON:0002020!2.15e-23!34;UBERON:0003528!2.15e-23!34;UBERON:0003075!5.95e-23!86;UBERON:0007284!5.95e-23!86;UBERON:0001893!7.78e-23!34;UBERON:0000924!1.16e-22!173;UBERON:0006601!1.16e-22!173;UBERON:0002791!1.19e-21!33;UBERON:0001869!4.06e-21!32;UBERON:0004121!2.43e-20!169;UBERON:0002619!1.31e-19!22;UBERON:0001950!1.76e-19!20;UBERON:0000956!1.15e-16!25;UBERON:0000203!1.15e-16!25;UBERON:0003056!6.63e-14!61;UBERON:0007023!8.34e-14!115;UBERON:0000033!1.04e-13!123;UBERON:0000153!1.75e-12!129;UBERON:0007811!1.75e-12!129;UBERON:0003076!7.79e-11!15;UBERON:0003057!7.79e-11!15;UBERON:0000025!1.70e-10!194;UBERON:0002298!2.33e-09!8;UBERON:0000200!2.35e-09!6;UBERON:0001871!5.89e-09!7;UBERON:0002308!3.07e-08!9;UBERON:0000125!3.07e-08!9;UBERON:0005174!4.02e-08!5;UBERON:0001137!4.02e-08!5;UBERON:0004733!1.94e-07!12;UBERON:0002028!1.94e-07!12;UBERON:0007277!1.94e-07!12;UBERON:0004732!9.79e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;6.22e-13;4!UBERON:0000923;6.22e-13;4!UBERON:0010316;6.22e-13;4!UBERON:0005291;6.22e-13;4!UBERON:0000007;2.47e-11;2!UBERON:0002050;1.94e-10;5!UBERON:0005423;1.94e-10;5!UBERON:0001017;7.46e-10;75!UBERON:0000955;1.07e-09;68!UBERON:0000073;1.92e-09;53!UBERON:0002616;1.92e-09;53!UBERON:0002298;2.23e-08;6!UBERON:0005383;2.97e-08;3!UBERON:0005382;2.97e-08;3!UBERON:0002780;7.61e-08;41!UBERON:0001890;7.61e-08;41!UBERON:0001896;9.39e-08;3!UBERON:0002242;9.39e-08;3!UBERON:0005290;9.39e-08;3!UBERON:0001016;1.49e-07;83!UBERON:0003528;3.24e-07;34!UBERON:0002020;3.24e-07;34!UBERON:0001894;4.27e-07;7!UBERON:0002791;7.12e-07;32!UBERON:0001874;7.35e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.86e-20,81;UBERON:0001016,5.85e-20,89;UBERON:0001049,1.05e-14,56;UBERON:0005068,1.05e-14,56;UBERON:0006241,1.05e-14,56;UBERON:0007135,1.05e-14,56;UBERON:0002346,1.70e-13,86;UBERON:0000073,1.85e-13,53;UBERON:0002616,1.85e-13,53;UBERON:0000955,2.55e-13,68;UBERON:0006238,2.55e-13,68;UBERON:0004121,7.17e-12,171;UBERON:0000924,7.17e-12,171;UBERON:0006601,7.17e-12,171;UBERON:0011216,8.04e-12,223;UBERON:0000007,2.54e-11,2;UBERON:0002780,1.64e-10,41;UBERON:0001890,1.64e-10,41;UBERON:0003080,1.64e-10,41;UBERON:0006240,1.64e-10,41;UBERON:0003075,3.43e-09,82;UBERON:0007284,3.43e-09,82;UBERON:0003528,2.02e-08,34;UBERON:0002020,2.02e-08,34;UBERON:0002298,2.74e-08,6;UBERON:0005383,2.97e-08,3;UBERON:0005382,2.97e-08,3;UBERON:0002242,7.14e-08,3;UBERON:0003068,7.14e-08,3;UBERON:0002328,7.14e-08,3;UBERON:0004880,7.14e-08,3;UBERON:0001896,1.28e-07,3;UBERON:0005290,1.28e-07,3;UBERON:0010096,1.28e-07,3;UBERON:0001894,4.70e-07,7;UBERON:0006222,4.70e-07,7;UBERON:0002791,6.65e-07,32;UBERON:0001869,6.65e-07,32;UBERON:0001874,7.35e-07,1 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.990130823680373,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,1.27047312111232,1.30139853857622,6.95959931499926,0.502548796003046,6.37938751653163,0,0,0,0.24538298343828,2.50085260529839,1.89885516589815,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.556608588971108,1.99613798001194,0,0,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0.173624994933292,0,5.78862905401958,0,0.221158519862449,0.295547618953547,0.87754158861589,0.10893846351899,0,0,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,1.40558667435203,0,0,0,0,2.41981432097328,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,1.8027707491708,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0.823040347426423,0,0,0,0,0,0,23.8517047028131,0,0,0,0,0,0,0.577901179803038,0,0.410716136675979,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0,0,0,0,0.789744236554321,0,0,0,0,0.179287339332845,0,0,0,0,0,1.72844298240254,0.326587360109409,0,0,0.170388021785422,0.339936274560377,0,0,0.775697738169303,5.81823447667836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,12.8127578147061,0.751145584238999,1.14681839138014,2.3295100822739,0.620964029413834,0,0.124980407962107,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0.601030435988874,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0.414775308455192,0.194860308839388,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0.383683113910955,0.539124056983409,2.83078695340614,0.764467467344097,0,18.068868208643,2.60265104943905,0,0,0,4.80342448971282,0,0,0.834979926253974,0,0.159633859057151,1.8460472781668,0.504143392443436,0.276629009856872,2.26065903884592,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0.675375846183947,0,0.413373593002368,0.317079050969534,1.64092442705466,0,0,34.1190214057664,0,0,0,4.85572483389305,1.59363533945908,0,0,2.05785611324902,0.883606528698812,0.197318320688547,0,0,0,7.8557794958001,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.467878926924211,2.38740930193642,0,0,0.109940516745429,1.81155412280008,0.0771741581079447,0.655678681511872,36.2144318198373,0,5.18488403623577,1.57046773691956,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0.436350690340377,2.1161073620616,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:224463466..224463480,- | |||
}} |
Revision as of 08:54, 21 January 2014
Short description: | p@chr2:224463466..224463480, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr2:224463466..224463480, - |
Coexpression cluster: | C708_smallcell_peripheral_gastrointestinal_neuroectodermal_Neurons_pituitary_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.60e-10 | 8 |
nucleus pulposus cell of intervertebral disc | 7.14e-08 | 3 |
peptide hormone secreting cell | 9.67e-07 | 1 |
enteroendocrine cell | 9.67e-07 | 1 |
type D enteroendocrine cell | 9.67e-07 | 1 |
somatostatin secreting cell | 9.67e-07 | 1 |
pancreatic D cell | 9.67e-07 | 1 |
progenitor cell of endocrine pancreas | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.89e-13 | 10 |
somatostatinoma | 9.67e-07 | 1 |