FFCP PHASE1:Hg19::chr2:224840611..224840624,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8951 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-229bp_to_AJ293400_5end | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_16_at_SERPINE2_5end | |||
|id=chr2:224840611..224840624,- | |||
|ontology_enrichment_celltype=CL:0000055!1.92e-15!180;CL:0000057!2.17e-13!75;CL:0002620!4.19e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;4.72e-18;4!CL:0002547;4.72e-18;4!CL:0000153;2.73e-17;9!CL:0000447;2.73e-17;9!CL:0002541;1.96e-14;3!CL:0002579;2.45e-14;3!CL:0002334;4.25e-13;12!CL:0000138;4.47e-12;6!CL:0000327;3.98e-10;15!CL:0000499;4.90e-09;28!CL:0002620;3.11e-08;23!CL:0000135;3.39e-07;3!CL:0000388;3.39e-07;3!CL:0000214;7.05e-07;3!CL:0002580;9.18e-07;3!CL:0000515;9.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,7.06e-18,4;CL:0002547,7.06e-18,4;CL:0000153,2.09e-17,9;CL:0000447,2.09e-17,9;CL:0000057,2.19e-16,76;CL:0002579,2.01e-14,3;CL:0002541,2.30e-14,3;CL:0002334,3.83e-13,12;CL:0000058,3.45e-12,6;CL:0000138,3.45e-12,6;CL:0000327,3.40e-10,15;CL:0000499,4.35e-09,28;CL:0002620,4.07e-08,23;CL:0000723,5.52e-08,433;CL:0000034,1.10e-07,441;CL:0000048,1.58e-07,427;CL:0000135,3.30e-07,3;CL:0000388,3.30e-07,3;CL:0000134,6.53e-07,354;CL:0000214,6.96e-07,3;CL:0002580,9.06e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.53e-14;3!DOID:127;6.53e-14;3!DOID:0060072;1.49e-10;4!DOID:17;3.48e-08;5!DOID:450;3.48e-08;5!DOID:66;3.48e-08;5!DOID:423;3.48e-08;5!DOID:0080000;3.48e-08;5!DOID:11722;3.48e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.76e-14,3;DOID:127,3.76e-14,3;DOID:0060072,9.89e-11,4;DOID:17,4.32e-08,5;DOID:450,4.32e-08,5;DOID:66,4.32e-08,5;DOID:423,4.32e-08,5;DOID:0080000,4.32e-08,5;DOID:11722,4.32e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.31e-09!40;UBERON:0002199!4.64e-08!45;UBERON:0002416!4.64e-08!45;UBERON:0003688!1.01e-07!6;UBERON:0002358!1.01e-07!6;UBERON:0003684!1.01e-07!6;UBERON:0001178!1.01e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;4.72e-18;4!UBERON:0000415;4.72e-18;4!UBERON:0007240;4.72e-18;4!UBERON:0005742;4.72e-18;4!UBERON:0005734;4.72e-18;4!UBERON:0004664;4.72e-18;4!UBERON:0004663;4.72e-18;4!UBERON:0004457;1.42e-17;9!UBERON:0000042;1.42e-17;9!UBERON:0003124;1.96e-14;3!UBERON:0000920;1.96e-14;3!UBERON:0003688;2.32e-12;6!UBERON:0002358;2.32e-12;6!UBERON:0003684;2.32e-12;6!UBERON:0001178;2.32e-12;6!UBERON:0005406;1.10e-10;2!UBERON:0007846;3.39e-07;3!UBERON:0000043;3.39e-07;3!UBERON:0007845;3.39e-07;3!UBERON:0004923;4.04e-07;55!UBERON:0006915;7.05e-07;3!UBERON:0007616;7.05e-07;3!UBERON:0002217;7.05e-07;3!UBERON:0002018;7.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,7.06e-18,4;UBERON:0007240,7.06e-18,4;UBERON:0005742,7.06e-18,4;UBERON:0005734,7.06e-18,4;UBERON:0004664,7.06e-18,4;UBERON:0004663,7.06e-18,4;UBERON:0000920,2.30e-14,3;UBERON:0004457,4.85e-13,12;UBERON:0000042,4.85e-13,12;UBERON:0003688,2.23e-12,6;UBERON:0002358,2.23e-12,6;UBERON:0003684,2.23e-12,6;UBERON:0001178,2.23e-12,6;UBERON:0005406,1.06e-10,2;UBERON:0004797,2.89e-10,7;UBERON:0004923,4.09e-10,66;UBERON:0007846,3.30e-07,3;UBERON:0000043,3.30e-07,3;UBERON:0007845,3.30e-07,3;UBERON:0002384,6.25e-07,371;UBERON:0006915,6.96e-07,3;UBERON:0007616,6.96e-07,3;UBERON:0002217,6.96e-07,3;UBERON:0002018,6.96e-07,3 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,2.00146596706261,0.893922188854576,7.85104671690332,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.44575660953827,1.50401373190767,2.31754430337318,0.795285947051099,7.78615792484217,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.39293562831038,1.05927344650575,7.74458876021797,2.4826786753885,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0.234321431833797,0,0,1.19558944441441,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,1.06778694409284,0.423863802319124,1.50045548042201,1.23663035086127,0.515281080091258,1.48893485065272,0.506328996723799,0.779496041289589,1.00973509697646,0.644349290496095,0.80823028409406,3.19508633264953,0.906768884048762,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.329250856225877,1.1240175325762,0,0.185176890317059,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0,0,0,0.517086863031111,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,1.88215698667853,2.05476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0.35142424497814,0,0,0,1.32845119707087,0.368738337083406,0.955719759148911,0,0,0,0,0,0,0,0,2.23297027036899,0.306923946576125,1.40330047216537,4.22859192543813,1.53512174720011,6.59501076688791,8.90508398669946,0.154209693802656,0,0,0,0,0,0.802025881213139,0.0920809889358963,0.34444334449382,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.495854746082934,0.384380134730212,0,0,0.929691098594572,4.40737285562896,0,0.308033580176089,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0.974853958525138,0,0.136499911407986,0.141405431953713,0,0,1.32687795048244,1.75380354101505,0,0,0,0,0.281695602532241,0,0,0,0,4.64436797654861,1.31717957183961,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,4.46601623624687,1.28236630762607,17.0571128325963,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,1.07572403599707,0,0,0,0.25426853765475,2.71499800876856,1.72844298240254,2.28611152076586,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0,0,0.110929051536852,0,0,0.249960815924213,0.454947352624943,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,1.51522404220071,0.251567901752575,0,0.686520205190771,0.151230923763239,0.777186002913902,0.887130899937803,0.477890301491107,0,0,4.56176828624941,1.06336685823198,0,0.300515217994437,0,0,0,0.214821114084977,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0,0.179088841081487,0.617602894321944,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.620916591138472,0,0.342976018874837,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0.207216164163037,0,0,0,0.354996002191696,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0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| |||
|short_description=p16@SERPINE2 | |||
}} |
Revision as of 08:55, 21 January 2014
Short description: | p16@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_16_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | -229bp_to_AJ293400_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 7.06e-18 | 4 |
fibroblast of the aortic adventitia | 7.06e-18 | 4 |
GAG secreting cell | 2.09e-17 | 9 |
carbohydrate secreting cell | 2.09e-17 | 9 |
fibroblast | 2.19e-16 | 76 |
omentum preadipocyte | 2.01e-14 | 3 |
chorionic membrane mesenchymal stem cell | 2.30e-14 | 3 |
preadipocyte | 3.83e-13 | 12 |
chondroblast | 3.45e-12 | 6 |
chondrocyte | 3.45e-12 | 6 |
extracellular matrix secreting cell | 3.40e-10 | 15 |
stromal cell | 4.35e-09 | 28 |
skin fibroblast | 4.07e-08 | 23 |
somatic stem cell | 5.52e-08 | 433 |
stem cell | 1.10e-07 | 441 |
multi fate stem cell | 1.58e-07 | 427 |
fibrocyte | 3.30e-07 | 3 |
tendon cell | 3.30e-07 | 3 |
mesenchymal cell | 6.53e-07 | 354 |
synovial cell | 6.96e-07 | 3 |
preadipocyte of the breast | 9.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 7.06e-18 | 4 |
tunica adventitia of artery | 7.06e-18 | 4 |
adventitia | 7.06e-18 | 4 |
tunica adventitia of blood vessel | 7.06e-18 | 4 |
aorta tunica adventitia | 7.06e-18 | 4 |
aorta wall | 7.06e-18 | 4 |
egg chorion | 2.30e-14 | 3 |
cavity lining | 4.85e-13 | 12 |
serous membrane | 4.85e-13 | 12 |
omentum | 2.23e-12 | 6 |
peritoneum | 2.23e-12 | 6 |
abdominal cavity | 2.23e-12 | 6 |
visceral peritoneum | 2.23e-12 | 6 |
perirenal fat | 1.06e-10 | 2 |
blood vessel layer | 2.89e-10 | 7 |
organ component layer | 4.09e-10 | 66 |
dense regular connective tissue | 3.30e-07 | 3 |
tendon | 3.30e-07 | 3 |
regular connective tissue | 3.30e-07 | 3 |
connective tissue | 6.25e-07 | 371 |
stratified squamous epithelium | 6.96e-07 | 3 |
layer of synovial tissue | 6.96e-07 | 3 |
synovial joint | 6.96e-07 | 3 |
synovial membrane of synovial joint | 6.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.76e-14 | 3 |
leiomyoma | 3.76e-14 | 3 |
benign neoplasm | 9.89e-11 | 4 |
musculoskeletal system disease | 4.32e-08 | 5 |
myotonic disease | 4.32e-08 | 5 |
muscle tissue disease | 4.32e-08 | 5 |
myopathy | 4.32e-08 | 5 |
muscular disease | 4.32e-08 | 5 |
myotonic dystrophy | 4.32e-08 | 5 |