FFCP PHASE1:Hg19::chr2:232325447..232325475,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7667 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000494618_5end | |||
|coexpression_cluster_id=C483 | |||
|description=CAGE_peak_8_at_NCL_5end | |||
|id=chr2:232325447..232325475,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.67e-29!239;DOID:162!9.22e-29!235;DOID:0050687!1.16e-15!143;DOID:305!3.77e-12!106;DOID:0050686!2.86e-11!137;DOID:2531!1.19e-10!51;DOID:0060083!1.19e-10!51;DOID:1240!5.04e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.02e-07;39!DOID:2531;7.88e-07;51!DOID:0060083;7.88e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.89e-29,239;DOID:162,6.45e-29,235;DOID:0050687,2.12e-15,143;DOID:305,3.91e-12,106;DOID:0050686,1.72e-11,137;DOID:2531,4.44e-11,51;DOID:0060083,4.44e-11,51;DOID:1240,2.27e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,2.35510576280081,0.563817616383885,3.00219895059391,1.78784437770915,0.872338524100369,2.53299878168311,1.89515962028049,2.87304191019822,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,1.36142988256051,1.65698687863958,2.01697543935533,4.21886169616784,2.92124036154949,4.87932798790507,0.246242116153576,0.612002073732759,0.626909442956176,1.14494394852423,3.14811177667634,2.25976751270645,9.01678187825825,8.7847630711442,8.42205360056368,0.393364276848904,0.383829398097213,0.309632246632152,1.83884244895785,0.30120591877825,1.10926203050036,3.95082722959538,4.69158467208491,0.587200878669695,0,3.81034450193269,2.60413044859022,0.223915474239924,0.647787332037959,0.77272670290256,2.18097358169347,0.377875943688809,2.42584061187816,1.85943229524548,3.28934310417461,2.47765096716083,2.3015391385772,1.7931249457037,0.709446689665756,1.03423704220986,4.51839278508678,0,2.07066573496865,2.45615535052061,0.674170453335254,1.83650335422542,0.641858054152187,1.27867425159808,1.9791078011203,1.79517291859469,3.83602275479425,4.64334781805734,2.8369261234557,3.11411124497787,4.01997864410789,3.65038042894141,0.434377689410233,3.63239701580021,1.84138817993782,0.632924774881769,1.26753171787165,0,1.25795187305026,0.673971786878971,0.750884464207532,0.64290234678832,0.285012743741249,0.99458338599545,0.730656615058536,0,0,0,0,0.800791974072025,0,1.32208974556972,0.954053754535364,2.27685187643779,2.93618594685469,2.6759125968766,0,1.12101712596307,1.84368859342554,1.96709770113833,3.93010762749165,4.31763147898969,1.17030546773475,1.62961133316795,1.89379122293893,0,0.891283655081389,0.589211814949674,0.443067789167242,0.812411591295047,2.17755243533648,1.8208308658383,1.64437904603676,0.552700035571697,0.579606171470105,2.07601188426885,1.60524496853828,1.04535523804977,1.35971211237079,0.766440987203842,0,1.51811815211702,1.59282707162048,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,2.21767417547206,4.27904313253612,4.92402973201517,0,0,0.511450247374121,1.44575660953827,1.00267582127178,2.02785126545153,1.5905718941022,0.973269740605272,1.51255707462509,3.32594096193846,3.33772185633879,0.982343066232845,0,2.22470665670658,0.649094787309367,0.348259474598534,1.72845348674525,0.953962497221368,0,0,0.596287222100115,0,1.04142150482278,0.56530794192401,0.419499436209906,5.22724279686128,0.626984899610432,0,0,0.33472061276467,0,0,1.70843440283719,0.735326160691737,1.62028389576352,3.75058858793135,1.79623498100936,4.0540132973996,0,0,3.29763139074733,0,0,0.872188104285069,3.97577561356255,2.40597972162702,0.794455084879313,3.44203944898576,3.90135220418193,0.560677600142307,0,1.72667283892012,0.622422070799533,0.67355336034844,1.14423332179421,0.454072282934794,0.576175924479999,0.468642863667593,2.18512053781224,0,5.38015249986484,1.76151747965647,1.78060238804945,2.24721290723598,1.42907919878425,7.12439040408254,1.34323515528495,1.18800285728205,2.71993622206413,0,0,1.85169725349473,2.62748891731125,0.831192346452549,1.75591048352335,0.919463387397059,1.35214253015937,1.70148274740032,4.84352016359927,1.92201649936711,2.33125091275518,2.10063767259082,1.13357782162283,2.06112432036503,0.930584281657949,3.20675031258406,0.779496041289589,5.04867548488229,0.644349290496095,1.45481451136931,2.4850671476163,1.30977727695932,2.54340888465731,0.386521706326594,0.545492241181669,0.860413786167011,6.58658013099815,6.89154795271723,5.34492137199785,4.97573064073778,4.54177531576131,3.28479623168247,0,4.5026865673502,0,2.78620756819187,1.44375896333917,5.79703320195235,5.73187946265546,4.82022059766964,4.30146493656336,4.13970943775572,5.45722423955522,6.47190279168789,4.12065076763227,8.0796902958742,1.4763109092493,0,0.4115740113314,0,0,2.94848165003288,8.86184860022106,2.6487785964879,1.59884970106048,2.05881372358231,1.20725313949488,0,9.55025237910493,3.33318402570707,0.651616610620649,1.03993478527958,7.21656710126366,0.695582429850461,0.234817388471643,1.58803092537181,2.77791307545966,7.99067439385313,0,0,0.492434012174795,0,2.52672975890838,0,1.00789276919316,0.992425680696705,4.47792613514241,4.06887513919547,1.91691339582606,1.97065295158377,1.14462964217194,0,0.576479813667846,0.25248486685276,1.52394946301206,1.14596527667483,1.17217447210047,0,2.26220483947312,2.10240140490742,1.14330573052231,0.560655421726804,0.87192013766656,2.42016343209135,0.517086863031111,3.57656445851882,6.762422020448,1.59562869950922,1.04007436911366,1.28603687131071,0,0.266422179016099,1.42977993658148,1.08524321078289,1.64648067356154,2.60588947434988,1.06617584622764,3.16780749173372,0.904318131178758,0,4.29883862082845,0,0,4.21667878966063,3.11512312139057,1.14861935834114,0,1.59259437334337,2.4657158706046,0.537182889719687,5.15591662370225,2.75843064282698,5.39068937148793,4.10697716095195,2.28685161800217,1.30139853857622,1.54657762555539,1.34013012267479,2.55175500661265,0,0,0,1.8403723757871,0.500170521059677,3.52644530809656,2.28767947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| |||
|short_description=p8@NCL | |||
}} |
Revision as of 09:10, 21 January 2014
Short description: | p8@NCL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NCL_5end |
Coexpression cluster: | C483_acute_diffuse_medulloblastoma_hepatocellular_small_mesothelioma_testicular |
Association with transcript: | -11bp_to_ENST00000494618_5end |
EntrezGene: | NCL |
HGNC: | 7667 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.89e-29 | 239 |
cancer | 6.45e-29 | 235 |
cell type cancer | 2.12e-15 | 143 |
carcinoma | 3.91e-12 | 106 |
organ system cancer | 1.72e-11 | 137 |
hematologic cancer | 4.44e-11 | 51 |
immune system cancer | 4.44e-11 | 51 |
leukemia | 2.27e-08 | 39 |