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FFCP PHASE1:Hg19::chr2:238189093..238189098,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:238189093..238189098,+|id=chr2:238189093..238189098,+|ontology_enrichment_celltype=CL:0000055!6.89e-40!180;CL:0000057!1.41e-33!75;CL:0000048!9.11e-23!430;CL:0000723!5.76e-22!436;CL:0000034!6.20e-21!444;CL:0000680!4.51e-20!57;CL:0000056!4.51e-20!57;CL:0000355!4.51e-20!57;CL:0000183!8.38e-18!59;CL:0000187!1.29e-17!54;CL:0002620!1.26e-16!23;CL:0002371!1.90e-15!591;CL:0000393!7.43e-15!60;CL:0000211!7.43e-15!60;CL:0000144!2.98e-14!625;CL:0000192!1.79e-12!42;CL:0000514!1.79e-12!42;CL:0002570!3.36e-11!8;CL:0002320!1.58e-10!365;CL:0000548!1.66e-10!679;CL:0000004!1.66e-10!679;CL:0000255!1.66e-10!679;CL:0000012!2.73e-10!682;CL:0000188!1.57e-09!9;CL:0000134!2.28e-09!358;CL:0000219!6.91e-08!390;CL:0000003!1.45e-07!722;CL:0002559!3.80e-07!4;CL:0002540!3.81e-07!6;CL:0002552!5.69e-07!5;CL:0000222!9.77e-07!119|ontology_enrichment_celltype_v019=CL:0002540;1.68e-14;6!CL:0000723;3.75e-14;61!CL:0000134;1.33e-12;55!CL:0000048;2.93e-12;58!CL:0002559;8.49e-12;5!CL:0000346;1.51e-11;3!CL:1000428;1.51e-11;3!CL:0000034;5.19e-11;69!CL:0000594;1.53e-10;3!CL:0002570;2.17e-10;8!CL:0002092;1.52e-08;10!CL:0000057;2.18e-08;73!CL:0000680;7.31e-08;7!CL:0002620;1.42e-07;23!CL:0002549;2.53e-07;2!CL:0002367;2.53e-07;2!CL:0002320;7.17e-07;188|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-16,76;CL:0002540,1.12e-14,6;CL:0000048,3.33e-13,427;CL:0000723,7.57e-13,433;CL:0000034,2.19e-12,441;CL:0002559,7.81e-12,5;CL:0000346,1.20e-11,3;CL:1000428,1.20e-11,3;CL:0000594,4.73e-11,3;CL:0002570,2.70e-10,8;CL:0002092,1.20e-08,10;CL:0002320,1.37e-08,361;CL:0000134,2.63e-08,354;CL:0002549,8.52e-08,2;CL:0002620,2.20e-07,23;CL:0000219,2.99e-07,386;CL:0002367,5.32e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.98e-07!5;DOID:450!1.98e-07!5;DOID:66!1.98e-07!5;DOID:423!1.98e-07!5;DOID:0080000!1.98e-07!5;DOID:11722!1.98e-07!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.11e-27!83;UBERON:0002329!1.11e-27!83;UBERON:0003077!1.11e-27!83;UBERON:0003059!1.11e-27!83;UBERON:0007282!1.11e-27!83;UBERON:0009618!1.11e-27!83;UBERON:0007285!1.11e-27!83;UBERON:0004290!1.33e-24!70;UBERON:0000486!5.66e-20!82;UBERON:0001134!5.05e-18!61;UBERON:0002036!5.05e-18!61;UBERON:0003082!5.05e-18!61;UBERON:0002385!4.21e-17!63;UBERON:0001015!4.21e-17!63;UBERON:0000383!4.21e-17!63;UBERON:0003102!1.53e-16!95;UBERON:0002199!3.30e-15!45;UBERON:0002416!3.30e-15!45;UBERON:0005256!1.16e-14!143;UBERON:0002097!1.32e-13!40;UBERON:0002384!1.74e-10!375;UBERON:0000475!4.96e-10!365;UBERON:0002067!5.44e-09!9;UBERON:0004016!5.44e-09!9;UBERON:0010083!5.44e-09!9;UBERON:0002100!1.22e-08!216;UBERON:0001013!1.32e-08!14;UBERON:0002073!3.80e-07!4;UBERON:0005086!3.80e-07!4;UBERON:0002204!7.63e-07!167|ontology_enrichment_uberon_v019=UBERON:0002073;8.49e-12;5!UBERON:0000412;1.51e-11;3!UBERON:0001992;1.51e-11;3!UBERON:0002097;1.51e-07;41!UBERON:0005629;2.53e-07;2!UBERON:0005358;2.53e-07;2!UBERON:0005969;2.53e-07;2!UBERON:0001886;2.53e-07;2!UBERON:0004086;2.53e-07;2!UBERON:0005282;2.53e-07;2!UBERON:0005281;2.53e-07;2!UBERON:0003956;2.53e-07;2!UBERON:0002371;4.70e-07;12!UBERON:0003102;4.98e-07;50!UBERON:0006876;5.11e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002073,7.81e-12,5;UBERON:0005086,7.81e-12,5;UBERON:0000412,1.20e-11,3;UBERON:0001992,1.20e-11,3;UBERON:0003102,3.40e-09,99;UBERON:0002199,4.80e-09,46;UBERON:0002416,4.80e-09,46;UBERON:0002097,7.62e-09,41;UBERON:0002384,4.43e-08,371;UBERON:0007524,4.83e-08,73;UBERON:0005629,8.52e-08,2;UBERON:0005358,8.52e-08,2;UBERON:0001886,8.52e-08,2;UBERON:0004086,8.52e-08,2;UBERON:0005282,8.52e-08,2;UBERON:0005281,8.52e-08,2;UBERON:0002329,2.70e-07,71;UBERON:0003059,2.70e-07,71;UBERON:0007282,2.70e-07,71;UBERON:0004290,2.70e-07,71;UBERON:0009618,2.70e-07,71;UBERON:0003077,3.79e-07,72;UBERON:0007285,3.79e-07,72;UBERON:0006876,5.11e-07,11;UBERON:0005969,5.32e-07,2;UBERON:0003956,5.32e-07,2|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0.61560529038394,1.02000345622126,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,3.70745706277013,1.14734648299525,0,0,2.1349799145941,0.49333509683432,0.311211035399766,0.134710672069688,0,1.96764655938411,1.72852777344,0.234321431833797,0,0.570471821544449,0.149448680551801,0.352303495931295,0.971237666208789,0.280901613404497,1.83738754129404,0.368502951935304,1.03325781175765,1.18800285728205,0.247266929278557,0,0.71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{{FFCP
|DHSsupport=
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=not
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr2:238189093..238189098,+
|id=chr2:238189093..238189098,+
|ontology_enrichment_celltype=CL:0000055!6.89e-40!180;CL:0000057!1.41e-33!75;CL:0000048!9.11e-23!430;CL:0000723!5.76e-22!436;CL:0000034!6.20e-21!444;CL:0000680!4.51e-20!57;CL:0000056!4.51e-20!57;CL:0000355!4.51e-20!57;CL:0000183!8.38e-18!59;CL:0000187!1.29e-17!54;CL:0002620!1.26e-16!23;CL:0002371!1.90e-15!591;CL:0000393!7.43e-15!60;CL:0000211!7.43e-15!60;CL:0000144!2.98e-14!625;CL:0000192!1.79e-12!42;CL:0000514!1.79e-12!42;CL:0002570!3.36e-11!8;CL:0002320!1.58e-10!365;CL:0000548!1.66e-10!679;CL:0000004!1.66e-10!679;CL:0000255!1.66e-10!679;CL:0000012!2.73e-10!682;CL:0000188!1.57e-09!9;CL:0000134!2.28e-09!358;CL:0000219!6.91e-08!390;CL:0000003!1.45e-07!722;CL:0002559!3.80e-07!4;CL:0002540!3.81e-07!6;CL:0002552!5.69e-07!5;CL:0000222!9.77e-07!119
|ontology_enrichment_celltype_v019=CL:0002540;1.68e-14;6!CL:0000723;3.75e-14;61!CL:0000134;1.33e-12;55!CL:0000048;2.93e-12;58!CL:0002559;8.49e-12;5!CL:0000346;1.51e-11;3!CL:1000428;1.51e-11;3!CL:0000034;5.19e-11;69!CL:0000594;1.53e-10;3!CL:0002570;2.17e-10;8!CL:0002092;1.52e-08;10!CL:0000057;2.18e-08;73!CL:0000680;7.31e-08;7!CL:0002620;1.42e-07;23!CL:0002549;2.53e-07;2!CL:0002367;2.53e-07;2!CL:0002320;7.17e-07;188
|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-16,76;CL:0002540,1.12e-14,6;CL:0000048,3.33e-13,427;CL:0000723,7.57e-13,433;CL:0000034,2.19e-12,441;CL:0002559,7.81e-12,5;CL:0000346,1.20e-11,3;CL:1000428,1.20e-11,3;CL:0000594,4.73e-11,3;CL:0002570,2.70e-10,8;CL:0002092,1.20e-08,10;CL:0002320,1.37e-08,361;CL:0000134,2.63e-08,354;CL:0002549,8.52e-08,2;CL:0002620,2.20e-07,23;CL:0000219,2.99e-07,386;CL:0002367,5.32e-07,2
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:17!1.98e-07!5;DOID:450!1.98e-07!5;DOID:66!1.98e-07!5;DOID:423!1.98e-07!5;DOID:0080000!1.98e-07!5;DOID:11722!1.98e-07!5
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000914!1.11e-27!83;UBERON:0002329!1.11e-27!83;UBERON:0003077!1.11e-27!83;UBERON:0003059!1.11e-27!83;UBERON:0007282!1.11e-27!83;UBERON:0009618!1.11e-27!83;UBERON:0007285!1.11e-27!83;UBERON:0004290!1.33e-24!70;UBERON:0000486!5.66e-20!82;UBERON:0001134!5.05e-18!61;UBERON:0002036!5.05e-18!61;UBERON:0003082!5.05e-18!61;UBERON:0002385!4.21e-17!63;UBERON:0001015!4.21e-17!63;UBERON:0000383!4.21e-17!63;UBERON:0003102!1.53e-16!95;UBERON:0002199!3.30e-15!45;UBERON:0002416!3.30e-15!45;UBERON:0005256!1.16e-14!143;UBERON:0002097!1.32e-13!40;UBERON:0002384!1.74e-10!375;UBERON:0000475!4.96e-10!365;UBERON:0002067!5.44e-09!9;UBERON:0004016!5.44e-09!9;UBERON:0010083!5.44e-09!9;UBERON:0002100!1.22e-08!216;UBERON:0001013!1.32e-08!14;UBERON:0002073!3.80e-07!4;UBERON:0005086!3.80e-07!4;UBERON:0002204!7.63e-07!167
|ontology_enrichment_uberon_v019=UBERON:0002073;8.49e-12;5!UBERON:0000412;1.51e-11;3!UBERON:0001992;1.51e-11;3!UBERON:0002097;1.51e-07;41!UBERON:0005629;2.53e-07;2!UBERON:0005358;2.53e-07;2!UBERON:0005969;2.53e-07;2!UBERON:0001886;2.53e-07;2!UBERON:0004086;2.53e-07;2!UBERON:0005282;2.53e-07;2!UBERON:0005281;2.53e-07;2!UBERON:0003956;2.53e-07;2!UBERON:0002371;4.70e-07;12!UBERON:0003102;4.98e-07;50!UBERON:0006876;5.11e-07;11
|ontology_enrichment_uberon_v019_2=UBERON:0002073,7.81e-12,5;UBERON:0005086,7.81e-12,5;UBERON:0000412,1.20e-11,3;UBERON:0001992,1.20e-11,3;UBERON:0003102,3.40e-09,99;UBERON:0002199,4.80e-09,46;UBERON:0002416,4.80e-09,46;UBERON:0002097,7.62e-09,41;UBERON:0002384,4.43e-08,371;UBERON:0007524,4.83e-08,73;UBERON:0005629,8.52e-08,2;UBERON:0005358,8.52e-08,2;UBERON:0001886,8.52e-08,2;UBERON:0004086,8.52e-08,2;UBERON:0005282,8.52e-08,2;UBERON:0005281,8.52e-08,2;UBERON:0002329,2.70e-07,71;UBERON:0003059,2.70e-07,71;UBERON:0007282,2.70e-07,71;UBERON:0004290,2.70e-07,71;UBERON:0009618,2.70e-07,71;UBERON:0003077,3.79e-07,72;UBERON:0007285,3.79e-07,72;UBERON:0006876,5.11e-07,11;UBERON:0005969,5.32e-07,2;UBERON:0003956,5.32e-07,2
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|short_description=p@chr2:238189093..238189098,+
}}

Revision as of 09:24, 21 January 2014

Short description:p@chr2:238189093..238189098, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): No
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:238189093..238189098, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data