FFCP PHASE1:Hg19::chr20:4229843..4229952,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=280 | |||
|TSSclassifier=strong | |||
|UniProt=P25100 | |||
|association_with_transcript=-122bp_to_ENST00000379453_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_1_at_ADRA1D_5end | |||
|id=chr20:4229843..4229952,- | |||
|ontology_enrichment_celltype=CL:0000055!9.09e-10!180;CL:0002620!2.86e-09!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.08e-09;23!CL:0002319;3.73e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.11e-09,23;CL:0002319,3.12e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.10e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.69e-22!365;UBERON:0005743!7.71e-16!86;UBERON:0001017!1.42e-15!82;UBERON:0000073!6.14e-15!94;UBERON:0001016!6.14e-15!94;UBERON:0000468!1.59e-13!659;UBERON:0007023!2.52e-13!115;UBERON:0000955!8.99e-13!69;UBERON:0006238!8.99e-13!69;UBERON:0001049!3.76e-12!57;UBERON:0005068!3.76e-12!57;UBERON:0006241!3.76e-12!57;UBERON:0007135!3.76e-12!57;UBERON:0002346!7.91e-12!90;UBERON:0000481!1.12e-11!347;UBERON:0000924!3.03e-11!173;UBERON:0006601!3.03e-11!173;UBERON:0000467!1.11e-10!625;UBERON:0000480!1.52e-10!626;UBERON:0001869!7.00e-10!32;UBERON:0000033!8.70e-10!123;UBERON:0003075!1.05e-09!86;UBERON:0007284!1.05e-09!86;UBERON:0001893!1.13e-09!34;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0004121!1.49e-09!169;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0002616!3.34e-09!59;UBERON:0003080!4.02e-09!42;UBERON:0002791!4.58e-09!33;UBERON:0002780!8.00e-09!41;UBERON:0001890!8.00e-09!41;UBERON:0006240!8.00e-09!41;UBERON:0000062!1.97e-08!511;UBERON:0000119!2.06e-08!312;UBERON:0000483!2.56e-08!309;UBERON:0000956!2.94e-08!25;UBERON:0000203!2.94e-08!25;UBERON:0004111!2.98e-08!241;UBERON:0000477!3.71e-08!286;UBERON:0003056!1.03e-07!61;UBERON:0002100!4.15e-07!216;UBERON:0002619!4.92e-07!22;UBERON:0000922!6.16e-07!612;UBERON:0003102!6.46e-07!95;UBERON:0000025!9.47e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;2.99e-09;5!UBERON:0005423;2.99e-09;5!UBERON:0002346;7.75e-08;4!UBERON:0000923;7.75e-08;4!UBERON:0010316;7.75e-08;4!UBERON:0005291;7.75e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.34e-11,81;UBERON:0004121,4.35e-11,171;UBERON:0000924,4.35e-11,171;UBERON:0006601,4.35e-11,171;UBERON:0001016,5.03e-11,89;UBERON:0000955,5.37e-10,68;UBERON:0006238,5.37e-10,68;UBERON:0002346,1.97e-08,86;UBERON:0002199,6.70e-08,46;UBERON:0002416,6.70e-08,46;UBERON:0002097,2.22e-07,41;UBERON:0003102,5.52e-07,99;UBERON:0001049,6.21e-07,56;UBERON:0005068,6.21e-07,56;UBERON:0006241,6.21e-07,56;UBERON:0007135,6.21e-07,56;UBERON:0000073,9.59e-07,53;UBERON:0002616,9.59e-07,53 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,0,0,0,0,0,1.20538905604795,0.730310090387373,0.487932798790507,1.60057375499824,2.44800829493104,6.58254915103984,1.14494394852423,1.64249310087461,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0.175669571386252,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,1.77883131343355,0,2.01414658554573,0,1.46437234528902,0,1.62028389576352,0,0.44905874525234,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0.70296429550139,0.936480230490962,0,2.54062756938062,1.64408298101271,0.809364721840658,0.561803226808994,0,0.245668634623536,0,3.56400857184616,3.4617370098998,0,2.15585442544872,0,0.250237039743928,0,3.5118209670467,5.82326812018137,2.10333282469236,0.453728732640084,3.22901344239952,2.34913127700424,3.39091041855299,3.30100205692843,0.618315175430633,1.28820270022815,1.11670113798954,5.23206629947925,3.31285817548075,1.51460264546469,1.84099797284599,0.969876340912871,3.55009592516614,2.31729825923573,1.18692414617341,0.773043412653187,0,0,0,0,0.116193942869518,0.414644220061482,0.504641701751257,0,1.56449532329816,9.00537313470039,15.1948413487729,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,15.426595118379,0,0,0,0,0,0,0,1.20097467208968,0.109750285408626,0,0,0,0.651616610620649,2.07986957055916,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.626909658919938,0,0,0,0.088048434013226,0.207328115540772,0,0.50496973370552,0,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0,0,0,5.85063856486715,6.24044621468197,0,0,0,0.285955987316295,4.34097284313154,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,1.77866236955724,2.60279707715243,5.41302168944387,0.167516265334349,2.55175500661265,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0,0.468565659970853,0,0,0,0,0.184369168541703,6.0818530127658,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0,0,4.00945203886904,2.66342587969691,1.31403449622095,0,2.09178681227927,0,0.40101294060657,0.460404944679482,0.459257792658427,0.910455840033585,1.83574180943194,0.451199612907412,0.15403067420883,3.92174884588428,0,0.105551628892876,2.27466768141793,0.170093705276516,0,0,2.16757150035082,3.01013864312912,0,3.3243040357149,0,0,0,1.53870075069834,0,0.325378394664303,0.412164046590889,9.61479380592606,10.808744489597,0,0,0,0.290012154876366,0,0,0.275673144969061,0,0,0.426133137080504,0.178064071293475,0,0,0,0.10115778085555,0,0.31481234683064,0.6970372701606,0,0,2.60979897622522,0.18532421910392,0,0,0,0,0.511795582622668,1.28381696410176,1.27281299170375,0,1.61885211824983,2.19629623788844,2.00281083987667,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,3.00299805097569,0.565621727814851,0,0.551365343546124,0,0,0,2.62357900818653,0,0.92947049429925,0,0.286822704408103,0,0,12.7713983065415,0,0,0.379473173765715,2.44954304171488,0,0,0,0.376575203107117,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,35.6117546447443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.703347082052564,0.111308705022906,0,0,7.96991953004279,0.276283915531148,0,4.09074730008619,0,5.59871257791253,0,0.358042349351218,0,2.07151151837561,0,0,6.78532922266653,1.76259386507517,1.99613798001194,0,0.0874599999961957,0.724999575434793,0,0.508507300585533,0,0,18.6626952565283,0.694499979733169,0.885741385813839,0.361789315876224,0,0,0,0.87754158861589,0,0.139423744278603,5.54041861227339,0,0,0,0.217294743844016,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0.943615861729479,3.21031058919516,2.81117334870407,0,0,0,0.789168805698781,0,0.91821828489147,0.568679216656392,0,0,1.32930774541437,2.64793564700399,3.13932918407225,3.58417289318877,0,0,0,0,0,1.22308667769421,0,0,0,0,0.581934098930517,0.353024506766001,0.451961481561065,0,0.19871461170299,2.84898581801454,0.391102765469606,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,5.30026403687095,3.24268823568233,4.6919180112708,0,0,0.410716136675979,0,0,0,0,1.14580212005842,0,0.199679000498991,0,0.223171457441873,1.07493555978762,0,0,0,0.0824158583811665,0.0674035438541849,4.62609163119319,0,15.1093641063768,0.817220436669454,0,0.137539436597234,0,0,0,3.03747783290123,0,0.315222829196793,0.83927341015997,0,0.896436696664224,0,0,0,0,2.17199840701485,0.864221491201268,0.653174720218818,0,0.492555124496034,1.02232813071253,8.49840686400943,0,0,0.904980694530854,0.52893040697076,3.76391043345525,0,0.961086713109252,2.04365596629566,1.24271716604159,0.992332043623902,0,0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| |||
|short_description=p1@ADRA1D | |||
}} |
Revision as of 10:01, 21 January 2014
Short description: | p1@ADRA1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADRA1D_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -122bp_to_ENST00000379453_5end |
EntrezGene: | ADRA1D |
HGNC: | 280 |
UniProt: | P25100 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.11e-09 | 23 |
neural cell | 3.12e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.34e-11 | 81 |
ectoderm-derived structure | 4.35e-11 | 171 |
ectoderm | 4.35e-11 | 171 |
presumptive ectoderm | 4.35e-11 | 171 |
nervous system | 5.03e-11 | 89 |
brain | 5.37e-10 | 68 |
future brain | 5.37e-10 | 68 |
neurectoderm | 1.97e-08 | 86 |
integument | 6.70e-08 | 46 |
integumental system | 6.70e-08 | 46 |
skin of body | 2.22e-07 | 41 |
surface structure | 5.52e-07 | 99 |
neural tube | 6.21e-07 | 56 |
neural rod | 6.21e-07 | 56 |
future spinal cord | 6.21e-07 | 56 |
neural keel | 6.21e-07 | 56 |
regional part of nervous system | 9.59e-07 | 53 |
regional part of brain | 9.59e-07 | 53 |