FFCP PHASE1:Hg19::chr20:6103596..6103610,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |||
|TSSclassifier=strong | |||
|UniProt=G3V1L6 | |||
|association_with_transcript=66bp_to_ENST00000536936_5end | |||
|coexpression_cluster_id=C2625 | |||
|description=CAGE_peak_8_at_FERMT1_5end | |||
|id=chr20:6103596..6103610,- | |||
|ontology_enrichment_celltype=CL:0000066!1.70e-23!254;CL:0000223!2.78e-19!59;CL:0002076!1.17e-18!43;CL:0002251!4.13e-11!21;CL:0002368!2.06e-10!13;CL:0002202!1.99e-07!9;CL:0002632!1.99e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.51e-22;42!CL:0002251;1.39e-21;20!CL:0000622;7.70e-17;5!CL:0002368;6.07e-15;13!CL:0000154;5.62e-14;6!CL:0002159;1.34e-13;14!CL:0002623;6.52e-11;3!CL:0000307;1.56e-10;3!CL:0002621;1.56e-10;3!CL:0002166;4.67e-10;3!CL:0000150;3.40e-09;9!CL:0002202;5.38e-09;9!CL:0002632;5.38e-09;9!CL:0002327;6.41e-08;4!CL:0000317;1.25e-07;2!CL:1000448;1.25e-07;2!CL:0002308;1.25e-07;2!CL:0002140;1.25e-07;2!CL:0000575;2.97e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.33e-29,42;CL:0000223,1.18e-26,58;CL:0002251,6.71e-22,20;CL:0000066,9.40e-21,253;CL:0000622,3.80e-17,5;CL:0002368,8.55e-15,13;CL:0000154,3.14e-14,6;CL:0002159,1.14e-13,14;CL:0002623,4.49e-11,3;CL:0002621,6.49e-11,3;CL:0000068,3.32e-10,3;CL:0000069,3.32e-10,3;CL:0000307,3.32e-10,3;CL:0000377,3.32e-10,3;CL:0002166,4.87e-10,3;CL:0000150,2.33e-09,9;CL:0002202,6.74e-09,9;CL:0002632,6.74e-09,9;CL:0002321,1.20e-08,250;CL:0002327,4.04e-08,4;CL:0000317,8.88e-08,2;CL:1000448,8.88e-08,2;CL:0002308,8.88e-08,2;CL:0002140,8.88e-08,2;CL:0000575,2.99e-07,2;CL:0000076,3.58e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;3.72e-16;58!CL:0000377;1.56e-10;3!UBERON:0008814;8.66e-08;2!UBERON:0010056;8.66e-08;2 | |||
|ontology_enrichment_disease=DOID:305!1.64e-19!106;DOID:0050687!1.96e-15!143;DOID:1749!1.45e-11!14;DOID:14566!3.31e-09!239;DOID:162!6.58e-09!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.29e-14;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.11e-14,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.27e-21!169;UBERON:0000925!2.27e-21!169;UBERON:0006595!2.27e-21!169;UBERON:0001007!5.56e-20!155;UBERON:0001555!5.56e-20!155;UBERON:0007026!5.56e-20!155;UBERON:0001004!4.76e-18!72;UBERON:0004921!1.10e-13!129;UBERON:0004185!1.10e-13!129;UBERON:0000077!1.47e-13!130;UBERON:0000065!1.55e-13!53;UBERON:0000072!5.37e-12!46;UBERON:0001041!1.69e-11!98;UBERON:0000481!2.19e-11!347;UBERON:0005911!6.83e-11!82;UBERON:0008947!3.75e-09!38;UBERON:0003258!3.75e-09!38;UBERON:0003104!2.40e-08!238;UBERON:0009142!2.40e-08!238;UBERON:0000161!3.43e-08!35;UBERON:0001557!4.52e-08!19;UBERON:0000166!5.68e-08!21;UBERON:0000165!9.11e-08!28;UBERON:0000930!9.11e-08!28;UBERON:0000064!9.21e-08!219;UBERON:0004807!1.89e-07!28;UBERON:0000063!2.66e-07!97;UBERON:0001048!4.47e-07!168;UBERON:0005153!5.11e-07!37;UBERON:0000475!6.90e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;7.50e-13;19!UBERON:0000166;7.50e-13;19!UBERON:0001949;1.56e-10;3!UBERON:0001004;1.58e-10;65!UBERON:0000165;4.92e-10;28!UBERON:0003729;8.10e-09;13!UBERON:0002365;1.21e-08;31!UBERON:0002330;1.21e-08;31!UBERON:0003343;1.84e-08;4!UBERON:0004785;1.84e-08;4!UBERON:0001041;5.37e-08;14!UBERON:0001911;6.41e-08;4!UBERON:0001708;1.20e-07;4!UBERON:0008895;1.20e-07;4!UBERON:0002419;1.25e-07;2!UBERON:0007771;1.25e-07;2!UBERON:0003297;1.25e-07;2!UBERON:0001821;1.25e-07;2!UBERON:0003487;1.25e-07;2!UBERON:0001820;1.25e-07;2!UBERON:0003929;1.28e-07;7!UBERON:0000344;2.93e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.31e-17,74;UBERON:0000166,1.75e-13,22;UBERON:0000033,3.23e-11,56;UBERON:0001949,6.49e-11,3;UBERON:0004119,1.99e-10,160;UBERON:0000925,1.99e-10,160;UBERON:0006595,1.99e-10,160;UBERON:0000153,9.09e-10,62;UBERON:0007811,9.09e-10,62;UBERON:0000165,1.01e-09,29;UBERON:0000930,1.01e-09,29;UBERON:0003102,1.86e-09,99;UBERON:0001007,2.84e-09,145;UBERON:0001555,2.84e-09,145;UBERON:0007026,2.84e-09,145;UBERON:0000161,4.75e-09,36;UBERON:0003729,6.37e-09,13;UBERON:0002365,1.05e-08,31;UBERON:0002330,1.05e-08,31;UBERON:0001041,1.19e-08,87;UBERON:0003343,2.35e-08,4;UBERON:0004785,2.35e-08,4;UBERON:0000065,2.54e-08,54;UBERON:0001911,4.04e-08,4;UBERON:0005333,4.04e-08,4;UBERON:0008425,4.04e-08,4;UBERON:0005311,4.04e-08,4;UBERON:0002419,8.88e-08,2;UBERON:0007771,8.88e-08,2;UBERON:0003297,8.88e-08,2;UBERON:0001821,8.88e-08,2;UBERON:0003487,8.88e-08,2;UBERON:0001820,8.88e-08,2;UBERON:0005089,8.88e-08,2;UBERON:0005088,8.88e-08,2;UBERON:0001708,1.24e-07,4;UBERON:0008895,1.24e-07,4;UBERON:0000344,2.59e-07,20;UBERON:0001444,3.26e-07,49;UBERON:0003350,8.22e-07,8;UBERON:0004921,9.87e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0.286235987131057,0.273748850145768,0.125542639594803,0.458480434487708,0.492603536699674,0.550975469195755,0,0,0,0.919421224478927,2.10844143144775,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.221729397462564,0.087834785693126,0.392937226493138,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,2.18047026071267,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0.103052529238439,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0,0,1.93260853163297,3.27295344709002,1.72082757233402,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,1.0647612003586,1.01150814046861,0.723033089650446,0.882351781859152,0.435758888184812,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0,4.39001141634502,0,0.502644862058154,0.740707561268237,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,1.87467667973554,1.00789276919316,1.55952606966625,1.43293636324557,2.61570544662566,1.91691339582606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.574890092096664,0,0.232420756919918,0.120859449591622,1.80455823272956,0.552485933615378,0,0,0.262248829918848,0.451199612907412,0.15403067420883,1.56869953835371,0,0.422206515571503,0,0,0,0,1.62567862526312,0,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0.650756789328606,0.103041011647722,0,0.330037999682352,1.72279661398852,2.60024098414608,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0,0.426133137080504,0.0890320356467374,1.15699440752685,2.69066094311149,1.53135254993501,0.6069466851333,0,0,0,0,0,1.73986598415015,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,1.05844323998063,1.34060455107157,3.26672954583968,0.0941438007767792,0.86101074534246,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.935702702041099,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,1.68900326502395,0,0.276283915531148,0.251932747854276,0,0.492339221844278,0,0.359473404589307,0.716084698702437,0,0,0,0,0,0,0,0.260427761085233,0,0,5.80346586256048,0.508507300585533,0,0.344743373241465,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0.762569244632931,3.06732237412927,0.461701551022782,0,0,0.0897576444097721,0,0,0.0915975934018623,0.533034776018635,0,0.31396051279005,0.498635045700469,0,0,0,0,0.317873157960757,0.210998064528027,0.326465616318295,0.141353071433941,1.29833183845255,0,0.619202951523374,0.611030144933625,0,0.247127877893006,0.313265848516366,0.134802265961354,0,0,0,3.91329237864179,0.728341138602278,0,0,0,0.189559738885464,0,0,0,0,1.2557316736289,0,0.284609546029793,0,0,0.685946781900644,0.783532859223623,0.873633341210151,0,0.580537987734511,0.146178634172371,0.574808199372465,1.84279131327997,0,0,0.274083849293502,0,0.0633107959558787,0.586654148204409,0.400794101257669,0.640358984218058,0,1.87317542300338,0,0,0.14405479798815,1.49103042678519,0,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0.136905378891993,0,0.859530882839914,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.787831823072237,0.659326867049332,1.07845670166696,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.242998226632099,9.05673656518018,0.551639951094387,0.472091293214983,0.316801009558219,0.179287339332845,0.191915197319445,0,0,0.76280561296425,0,0,0.326587360109409,0,0,0.170388021785422,0.226624183040251,0,0,0.129282956361551,0,1.36869470307464,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,2.04170325125305,0,0.244052529803926,0,0,0,0.18628920882415,0,1.99968652739371,0,0,0.235265819698172,0,0,0.447764408660622,0.701139929541673,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,1.81364740409818,0,0,0,0.926404341482917,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585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| |||
|short_description=p8@FERMT1 | |||
}} |
Revision as of 10:10, 21 January 2014
Short description: | p8@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FERMT1_5end |
Coexpression cluster: | C2625_oral_keratoacanthoma_bronchial_Small_ductal_squamous_Keratinocyte |
Association with transcript: | 66bp_to_ENST00000536936_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | G3V1L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.33e-29 | 42 |
endodermal cell | 1.18e-26 | 58 |
epithelial cell of alimentary canal | 6.71e-22 | 20 |
epithelial cell | 9.40e-21 | 253 |
acinar cell | 3.80e-17 | 5 |
respiratory epithelial cell | 8.55e-15 | 13 |
protein secreting cell | 3.14e-14 | 6 |
general ecto-epithelial cell | 1.14e-13 | 14 |
acinar cell of salivary gland | 4.49e-11 | 3 |
gingival epithelial cell | 6.49e-11 | 3 |
duct epithelial cell | 3.32e-10 | 3 |
branched duct epithelial cell | 3.32e-10 | 3 |
tracheal epithelial cell | 3.32e-10 | 3 |
tracheoblast | 3.32e-10 | 3 |
epithelial cell of Malassez | 4.87e-10 | 3 |
glandular epithelial cell | 2.33e-09 | 9 |
epithelial cell of tracheobronchial tree | 6.74e-09 | 9 |
epithelial cell of lower respiratory tract | 6.74e-09 | 9 |
embryonic cell | 1.20e-08 | 250 |
mammary gland epithelial cell | 4.04e-08 | 4 |
sebum secreting cell | 8.88e-08 | 2 |
epithelial cell of sweat gland | 8.88e-08 | 2 |
epithelial cell of skin gland | 8.88e-08 | 2 |
acinar cell of sebaceous gland | 8.88e-08 | 2 |
corneal epithelial cell | 2.99e-07 | 2 |
squamous epithelial cell | 3.58e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.11e-14 | 14 |