FFCP PHASE1:Hg19::chr20:57556290..57556370,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51497 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15934 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IXH7 | |||
|association_with_transcript=0bp_to_ENST00000344018,ENST00000460601,ENST00000464363,ENST00000471621,ENST00000482747,ENST00000492016,NM_198976,uc002yaf.1,uc002yag.2,uc002yah.2,uc010zzu.1_5end | |||
|description=CAGE_peak_1_at_TH1L_5end | |||
|id=chr20:57556290..57556370,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.78e-13!254;CL:0000220!4.50e-08!246;CL:0002321!1.60e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.45e-14,253;CL:0002321,1.74e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.48e-21!235;DOID:14566!1.10e-19!239;DOID:0050687!3.73e-17!143;DOID:305!1.95e-15!106;DOID:0050686!4.53e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.48e-21,235;DOID:14566,1.10e-19,239;DOID:0050687,3.73e-17,143;DOID:305,1.95e-15,106;DOID:0050686,4.53e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0000072!1.61e-07!46;UBERON:0001737!2.62e-07!9;UBERON:0000064!5.07e-07!219;UBERON:0000063!8.22e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.58e-07;9!UBERON:0001557;2.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.62e-07,9;UBERON:0000072,5.46e-07,47;UBERON:0001041,7.12e-07,87;UBERON:0000119,7.19e-07,309 | |||
|phase1_expression=11.2640595147745,21.1959518652073,10.1487170949099,16.0117277365009,15.6436383049551,25.2978171989107,12.6649939084155,13.8978372153903,26.6409340763835,36.3686226022233,52.3350875979321,29.2711438654431,30.5969694745006,21.5353454150481,25.8489953067774,18.8251041006497,24.7104756489831,19.7183724404591,20.4931775492013,55.5275971926313,58.1401970046121,51.4065743224064,39.7868022112169,38.8723367206991,42.684497462233,25.5984909255637,27.257395697382,24.7151853324953,14.5544782434094,18.4238111086662,19.3520154145095,41.3739551015517,41.8676227101768,37.3451550268456,29.5924706216752,47.2001851858239,32.589648766168,14.4038806218288,18.2495447197829,16.7098370451206,7.61312612415743,14.5752149708541,8.24241816429397,8.14230137165562,3.77875943688809,8.24785808038575,5.34586784883075,6.16751832032739,7.74265927237759,7.19230980805376,4.61089271752381,4.96612682766029,4.82643953031266,4.51839278508678,4.06279459783025,6.02375486536335,6.82265375144614,6.29225756446237,5.81559395504715,4.17207735198922,11.5080682643827,4.94776950280074,4.9865914405408,6.39337125799041,2.90209238628584,8.5107783703671,4.35975574296902,5.52747063564835,4.17186334736161,5.86409880703815,6.65939452896706,4.41933163185078,6.32924774881769,18.8017204817628,15.0949052975181,18.0306435137203,14.6027220490444,14.2668048199431,15.1082051495255,17.6707901119574,14.9187507899318,20.2757210678744,29.9193615584249,30.0376236194172,39.1384071699964,23.4701622411579,30.4300950147369,35.0598988372235,29.0859744025339,31.483773899667,19.9224539188307,27.0129107110632,17.9668417218858,23.7908391442247,31.388479526966,30.815937918684,26.1623994251398,20.8295704257057,21.793758893948,20.7311254284441,27.7033926638552,27.4599727326145,15.5861382726329,17.6028521878574,22.0954430606128,15.9504404100207,24.9139554663814,18.4451500404972,18.7285460486225,14.4705356051235,21.0026013517245,21.4454283443939,20.1669725900402,21.403266247177,30.3153019034433,22.6618685395132,19.1610246800961,25.084803520232,29.8563236583013,25.4852331459277,27.3455050619696,34.2162736001415,26.0494956004547,28.157054453972,34.9806034346568,28.176492993238,42.6986558398944,26.0072698759905,28.3486607530518,25.923568295021,17.0664806419773,24.8159318090345,30.4312897187602,24.2164232097659,26.0695713530663,24.4790617043792,27.0397221997374,17.5188553308949,25.5244006342983,23.2815867335692,32.6745402778429,25.2789615710585,37.1581194058393,38.1907976067962,9.7364218096405,9.92539502605823,11.5673425651413,20.0332124416487,25.1677760743256,20.8016200744556,35.7772333260069,34.409383804245,24.6469756141392,28.8307050381245,27.6869627898538,30.2629846134074,39.9180386085308,20.6733407335463,23.8363396000096,25.4387665701149,29.4065401489677,30.4108842287405,28.3111986755877,31.6190249097447,31.5955359673886,21.8784334295995,21.5548197721123,32.8825523011301,42.9286584904473,49.3618142975427,39.9379801768288,10.5424333948851,3.87780264148325,35.7597122756878,14.4121865991642,18.7413157263578,27.5411096091495,27.2494789711373,23.4081132250916,43.7328528111,18.1473292740498,20.7200740670414,25.8305159381806,20.6107328266623,28.9327568510822,36.7798549177183,19.58998143232,36.3198219342385,37.1470491428081,48.4901048312782,25.8546217354616,43.9205024927681,36.7451583715659,35.8149557090734,18.5780295841953,28.6203959336419,18.5986406116378,14.2560342873846,21.0176889886773,39.1369385633351,33.056434523547,32.6572061070888,37.9109115212051,19.3944880838928,22.3878586649227,22.6800968891275,20.5826140702038,21.665546983564,25.8321075391961,16.0168041613926,19.4977349066797,28.5086541280182,20.5074533184493,30.6592242654299,16.7505170698431,24.6413445072249,19.7797120477233,30.5444866835379,18.2258799311753,22.4688018978149,27.3357386237793,24.3820077710889,25.6036494388836,20.2923895821462,22.6379280090393,11.7589884109492,11.3435546700524,13.2529768321485,16.1509580588631,13.5795982070135,14.3822884999108,14.5990943630332,21.9029345261742,23.7999147131368,33.1523811245953,15.3241416250553,15.8813485967309,69.4460916233884,68.9511382419436,72.5443199949281,60.9925669210139,71.4644576623092,68.0966676848847,66.4718349229611,62.9870903052361,68.1002467795111,32.4788400034845,44.8773676171027,41.15740113314,63.213745895783,19.0132552232746,29.4848165003288,27.767125614026,67.1023911110269,48.2114679089005,22.8185187697039,19.0965496611008,37.0925785750145,32.8729739786033,27.9617104378759,26.7162810354466,41.5973914111831,33.1962086658129,34.4313302775978,20.1942954085613,30.0282211343034,20.3713625533709,26.4453271606092,161.201697183692,150.235078366603,4.43190610957315,23.4004265139238,11.5932306585208,22.4961201568265,17.4701413326814,22.8257906560242,20.5089016989523,19.7631078189494,37.5715025581907,12.3165809473986,13.9116525740897,22.8060927094849,20.7532732920424,18.4313952802515,52.7667501567925,45.0746342158768,59.780898077124,46.1895604261304,31.6708677526236,28.5325904951722,32.5842133198859,47.2071865093969,46.2117672963277,23.3215748910621,16.02969275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22.5426648821949,29.4923012918974 | |||
|short_description=p1@TH1L | |||
}} |
Revision as of 12:30, 21 January 2014
Short description: | p1@TH1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TH1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344018, ENST00000460601, ENST00000464363, ENST00000471621, ENST00000482747, ENST00000492016, NM_198976, uc002yaf.1, uc002yag.2, uc002yah.2, uc010zzu.1_5end |
EntrezGene: | TH1L |
HGNC: | 15934 |
UniProt: | Q8IXH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.45e-14 | 253 |
embryonic cell | 1.74e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.62e-07 | 9 |
segment of respiratory tract | 5.46e-07 | 47 |
foregut | 7.12e-07 | 87 |
cell layer | 7.19e-07 | 309 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.48e-21 | 235 |
disease of cellular proliferation | 1.10e-19 | 239 |
cell type cancer | 3.73e-17 | 143 |
carcinoma | 1.95e-15 | 106 |
organ system cancer | 4.53e-09 | 137 |